Guide to the Human Genome
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Name: AQP12B Sequence: fasta or formatted (307aa) NCBI GI: 156447037
Description:

aquaporin 12B

Referenced in:

Aquaporins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.7         42           2
 C cysteine            2.6          8           1
 D aspartate           1.6          5           1
 E glutamate           4.2         13           2
 F phenylalanine       5.9         18           3
 G glycine             8.5         26           1
 H histidine           3.3         10           1
 I isoleucine          0.0          0           0
 K lysine              2.0          6           1
 L leucine            16.6         51           3
 M methionine          2.0          6           1
 N asparagine          1.6          5           1
 P proline             6.2         19           2
 Q glutamine           3.6         11           1
 R arginine            4.2         13           2
 S serine              7.5         23           2
 T threonine           6.5         20           1
 V valine              6.5         20           1
 W tryptophan          1.3          4           1
 Y tyrosine            2.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aquaporin 12B 
AQP12A                0.936   aquaporin 12A 
AQP11                 0.149   aquaporin 11 
AQP8                  0.022   aquaporin 8 
AQP6                  0.020   aquaporin 6 
AQP5                  0.020   aquaporin 5 
AQP1                  0.015   aquaporin 1 
AQP2                  0.014   aquaporin 2 
ZNF395                0.014   zinc finger protein 395 
AQP4                  0.012   aquaporin 4 isoform b 
AQP4                  0.012   aquaporin 4 isoform a 
STXBP5                0.012   syntaxin binding protein 5 (tomosyn) isoform b [Hom...
SLC9A2                0.008   solute carrier family 9 (sodium/hydrogen exchanger),...
KIR2DL4               0.005   killer cell immunoglobulin-like receptor, two domai...
KIR2DL4               0.005   killer cell immunoglobulin-like receptor, two domai...
KIR2DL4               0.005   killer cell immunoglobulin-like receptor, two domai...
STXBP5                0.005   syntaxin binding protein 5 (tomosyn) isoform a [Hom...
TASP1                 0.005   taspase 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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