Guide to the Human Genome
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Name: NKPD1 Sequence: fasta or formatted (610aa) NCBI GI: 115647960
Description:

NTPase, KAP family P-loop domain containing 1 isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {619aa} NTPase, KAP family P-loop domain containing 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         52           2
 C cysteine            2.5         15           2
 D aspartate           4.4         27           2
 E glutamate           4.9         30           2
 F phenylalanine       3.9         24           1
 G glycine             8.7         53           2
 H histidine           2.8         17           2
 I isoleucine          2.8         17           2
 K lysine              2.6         16           2
 L leucine            13.0         79           2
 M methionine          1.5          9           1
 N asparagine          2.3         14           1
 P proline             5.4         33           2
 Q glutamine           5.9         36           6
 R arginine            8.9         54           3
 S serine              6.1         37           2
 T threonine           4.6         28           2
 V valine              7.4         45           2
 W tryptophan          2.0         12           1
 Y tyrosine            2.0         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NTPase, KAP family P-loop domain containing 1 isofo... 
NKPD1                 1.000   NTPase, KAP family P-loop domain containing 1 isofo...
KIDINS220             0.083   kinase D-interacting substrate of 220 kDa 
LOC100292048          0.008   PREDICTED: hypothetical protein XP_002344877 
LOC645781             0.006   PREDICTED: similar to mCG141871 
LOC100129129          0.006   PREDICTED: hypothetical protein 
LOC645781             0.006   PREDICTED: similar to mCG141871 
MAP4K4                0.006   mitogen-activated protein kinase kinase kinase kinas...
ZNF541                0.006   zinc finger protein 541 
LOC100289126          0.006   PREDICTED: hypothetical protein XP_002343381 
FNDC1                 0.006   fibronectin type III domain containing 1 
LOC645781             0.006   PREDICTED: similar to mCG141871 
LOC100290274          0.005   PREDICTED: hypothetical protein XP_002346984 
LOC100288645          0.005   PREDICTED: hypothetical protein XP_002342846 
VASP                  0.005   vasodilator-stimulated phosphoprotein 
CD99                  0.005   CD99 antigen isoform b precursor 
CD99                  0.005   CD99 antigen isoform a precursor 
FAT3                  0.005   FAT tumor suppressor homolog 3 
COL1A2                0.004   alpha 2 type I collagen 
LOC100131455          0.004   PREDICTED: hypothetical protein 
LOC100131455          0.004   PREDICTED: hypothetical protein 
LOC100131455          0.004   PREDICTED: hypothetical protein 
MLL5                  0.004   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.004   myeloid/lymphoid or mixed-lineage leukemia 5 
SNIP1                 0.004   Smad nuclear interacting protein 
LOC283999             0.004   hypothetical protein LOC283999 
DAXX                  0.004   death-domain associated protein isoform a 
DAXX                  0.004   death-domain associated protein isoform a 
DAXX                  0.004   death-domain associated protein isoform b 
LOC645321             0.004   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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