Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PHKB Sequence: fasta or formatted (1093aa) NCBI GI: 4505783
Description:

phosphorylase kinase, beta isoform a

Referenced in:

Glycogen

Other entries for this name:
alt prot [1086aa] phosphorylase kinase, beta isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         51           2
 C cysteine            1.8         20           1
 D aspartate           5.8         63           3
 E glutamate           6.2         68           3
 F phenylalanine       4.0         44           2
 G glycine             6.1         67           2
 H histidine           2.2         24           2
 I isoleucine          6.8         74           2
 K lysine              5.9         64           2
 L leucine            11.5        126           3
 M methionine          1.6         18           2
 N asparagine          4.3         47           2
 P proline             5.3         58           2
 Q glutamine           5.9         64           2
 R arginine            5.6         61           2
 S serine              6.1         67           3
 T threonine           4.3         47           2
 V valine              6.4         70           2
 W tryptophan          1.3         14           1
 Y tyrosine            4.2         46           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphorylase kinase, beta isoform a 
PHKB                  0.964   phosphorylase kinase, beta isoform b 
PHKA1                 0.209   phosphorylase kinase, alpha 1 (muscle) isoform 2 [H...
PHKA1                 0.209   phosphorylase kinase, alpha 1 (muscle) isoform 1 [H...
PHKA2                 0.201   phosphorylase kinase, alpha 2 (liver) 
AKAP5                 0.004   A-kinase anchor protein 5 
LSG1                  0.003   large subunit GTPase 1 
CCDC18                0.003   sarcoma antigen NY-SAR-41 
TXNDC2                0.003   thioredoxin domain-containing 2 isoform 1 
TXNDC2                0.003   thioredoxin domain-containing 2 isoform 2 
TXNDC2                0.003   thioredoxin domain-containing 2 isoform 1 
LOC100293631          0.003   PREDICTED: similar to solute carrier family 4 (anio...
LOC100288436          0.003   PREDICTED: similar to solute carrier family 4 (anio...
LOC100288436          0.003   PREDICTED: hypothetical protein XP_002342928 
MNS1                  0.003   meiosis-specific nuclear structural 1 
RILPL1                0.003   Rab interacting lysosomal protein-like 1 
RPH3AL                0.003   rabphilin 3A-like (without C2 domains) 
SATB1                 0.003   special AT-rich sequence binding protein 1 
SATB1                 0.003   special AT-rich sequence binding protein 1 
SGIP1                 0.003   SH3-domain GRB2-like (endophilin) interacting prote...
NFYC                  0.002   nuclear transcription factor Y, gamma isoform 4 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press