Guide to the Human Genome
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Name: AQP9 Sequence: fasta or formatted (295aa) NCBI GI: 157266307
Description:

aquaporin 9

Referenced in:

Aquaporins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.2         33           2
 C cysteine            1.4          4           1
 D aspartate           2.0          6           1
 E glutamate           4.4         13           1
 F phenylalanine       7.1         21           1
 G glycine            11.5         34           2
 H histidine           1.4          4           2
 I isoleucine          8.5         25           2
 K lysine              3.7         11           1
 L leucine            10.8         32           2
 M methionine          3.1          9           1
 N asparagine          3.1          9           2
 P proline             4.7         14           1
 Q glutamine           2.0          6           1
 R arginine            3.1          9           1
 S serine              6.1         18           2
 T threonine           3.1          9           1
 V valine              8.8         26           2
 W tryptophan          1.4          4           2
 Y tyrosine            2.7          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aquaporin 9 
AQP10                 0.466   aquaporin 10 
AQP3                  0.463   aquaporin 3 
AQP7                  0.395   aquaporin 7 
AQP5                  0.129   aquaporin 5 
AQP6                  0.121   aquaporin 6 
AQP2                  0.118   aquaporin 2 
AQP4                  0.111   aquaporin 4 isoform b 
AQP4                  0.111   aquaporin 4 isoform a 
AQP8                  0.100   aquaporin 8 
MIP                   0.100   major intrinsic protein of lens fiber 
AQP1                  0.093   aquaporin 1 
SLC24A2               0.014   solute carrier family 24 (sodium/potassium/calcium ex...
KRT10                 0.005   keratin 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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