Guide to the Human Genome
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Name: AQP10 Sequence: fasta or formatted (301aa) NCBI GI: 22538420
Description:

aquaporin 10

Referenced in:

Aquaporins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0         36           1
 C cysteine            1.7          5           1
 D aspartate           1.7          5           1
 E glutamate           3.7         11           1
 F phenylalanine       4.0         12           2
 G glycine            10.6         32           2
 H histidine           2.0          6           2
 I isoleucine          4.0         12           1
 K lysine              2.0          6           1
 L leucine            14.6         44           2
 M methionine          3.0          9           1
 N asparagine          3.7         11           2
 P proline             6.3         19           1
 Q glutamine           3.7         11           1
 R arginine            2.7          8           2
 S serine              4.7         14           1
 T threonine           6.0         18           1
 V valine              9.3         28           3
 W tryptophan          1.7          5           3
 Y tyrosine            3.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aquaporin 10 
AQP9                  0.452   aquaporin 9 
AQP3                  0.433   aquaporin 3 
AQP7                  0.362   aquaporin 7 
AQP4                  0.076   aquaporin 4 isoform b 
AQP4                  0.076   aquaporin 4 isoform a 
AQP1                  0.069   aquaporin 1 
AQP5                  0.057   aquaporin 5 
MIP                   0.057   major intrinsic protein of lens fiber 
AQP2                  0.055   aquaporin 2 
AQP6                  0.050   aquaporin 6 
AQP8                  0.048   aquaporin 8 
AQP11                 0.009   aquaporin 11 
SFXN5                 0.009   sideroflexin 5 
SLC5A11               0.007   solute carrier family 5 (sodium/glucose cotransporte...
GALC                  0.005   galactosylceramidase isoform a precursor 
GALC                  0.005   galactosylceramidase isoform b precursor 
KIR2DS5               0.005   killer cell immunoglobulin-like receptor, two domai...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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