Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: AQP11 Sequence: fasta or formatted (271aa) NCBI GI: 27370565
Description:

aquaporin 11

Referenced in:

Aquaporins
Kidney

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         22           2
 C cysteine            3.7         10           3
 D aspartate           1.1          3           1
 E glutamate           3.7         10           1
 F phenylalanine       7.0         19           2
 G glycine             5.2         14           2
 H histidine           4.8         13           1
 I isoleucine          3.0          8           1
 K lysine              1.8          5           2
 L leucine            18.8         51           2
 M methionine          4.1         11           2
 N asparagine          2.2          6           2
 P proline             4.1         11           1
 Q glutamine           4.1         11           2
 R arginine            3.7         10           1
 S serine              7.7         21           2
 T threonine           6.3         17           1
 V valine              7.4         20           2
 W tryptophan          1.5          4           1
 Y tyrosine            1.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aquaporin 11 
AQP12B                0.169   aquaporin 12B 
AQP12A                0.149   aquaporin 12A 
AQP8                  0.021   aquaporin 8 
NALCN                 0.013   voltage gated channel like 1 
AQP10                 0.010   aquaporin 10 
FSD1                  0.008   fibronectin type III and SPRY domain containing 1 [H...
ABCC10                0.008   ATP-binding cassette, sub-family C, member 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press