Guide to the Human Genome
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Name: AQP7 Sequence: fasta or formatted (342aa) NCBI GI: 4502187
Description:

aquaporin 7

Referenced in:

Aquaporins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         29           3
 C cysteine            0.6          2           1
 D aspartate           1.5          5           1
 E glutamate           3.8         13           1
 F phenylalanine       5.6         19           1
 G glycine            10.2         35           2
 H histidine           3.2         11           1
 I isoleucine          6.1         21           2
 K lysine              2.6          9           2
 L leucine            10.2         35           2
 M methionine          4.4         15           2
 N asparagine          3.5         12           2
 P proline             6.1         21           2
 Q glutamine           2.3          8           1
 R arginine            3.8         13           2
 S serine              7.0         24           2
 T threonine           5.6         19           1
 V valine              9.4         32           2
 W tryptophan          2.3          8           3
 Y tyrosine            3.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aquaporin 7 
AQP3                  0.373   aquaporin 3 
AQP9                  0.330   aquaporin 9 
AQP10                 0.312   aquaporin 10 
AQP2                  0.106   aquaporin 2 
MIP                   0.093   major intrinsic protein of lens fiber 
AQP4                  0.087   aquaporin 4 isoform b 
AQP4                  0.087   aquaporin 4 isoform a 
AQP6                  0.082   aquaporin 6 
AQP5                  0.081   aquaporin 5 
AQP1                  0.060   aquaporin 1 
AQP8                  0.049   aquaporin 8 
HCN3                  0.010   hyperpolarization activated cyclic nucleotide-gated ...
SLC44A4               0.007   choline transporter-like protein 4 
LOC100288473          0.007   PREDICTED: hypothetical protein XP_002343336 
MLL                   0.007   myeloid/lymphoid or mixed-lineage leukemia protein [...
LOC100291393          0.006   PREDICTED: hypothetical protein XP_002347924 
LOC100131525          0.004   PREDICTED: hypothetical protein 
C6orf192              0.004   hypothetical protein LOC116843 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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