Guide to the Human Genome
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Name: AQP2 Sequence: fasta or formatted (271aa) NCBI GI: 4502179
Description:

aquaporin 2

Referenced in:

Aquaporins
Kidney

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.9         35           2
 C cysteine            1.5          4           1
 D aspartate           2.6          7           2
 E glutamate           4.4         12           2
 F phenylalanine       5.2         14           2
 G glycine             8.9         24           1
 H histidine           3.0          8           1
 I isoleucine          4.4         12           1
 K lysine              1.5          4           1
 L leucine            14.8         40           2
 M methionine          1.1          3           1
 N asparagine          2.6          7           1
 P proline             5.2         14           2
 Q glutamine           3.0          8           1
 R arginine            4.8         13           3
 S serine              7.0         19           1
 T threonine           5.2         14           2
 V valine              8.9         24           2
 W tryptophan          1.8          5           1
 Y tyrosine            1.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aquaporin 2 
AQP5                  0.631   aquaporin 5 
MIP                   0.588   major intrinsic protein of lens fiber 
AQP6                  0.535   aquaporin 6 
AQP4                  0.406   aquaporin 4 isoform b 
AQP4                  0.406   aquaporin 4 isoform a 
AQP1                  0.400   aquaporin 1 
AQP8                  0.184   aquaporin 8 
AQP7                  0.139   aquaporin 7 
AQP9                  0.129   aquaporin 9 
AQP3                  0.100   aquaporin 3 
AQP10                 0.062   aquaporin 10 
AQP12A                0.018   aquaporin 12A 
AQP12B                0.016   aquaporin 12B 
CYB5B                 0.012   cytochrome b5 outer mitochondrial membrane precursor...
SLC6A1                0.010   solute carrier family 6 (neurotransmitter transport...
SPNS2                 0.008   spinster homolog 2 
LOC100131774          0.008   PREDICTED: hypothetical protein 
LOC100293547          0.006   PREDICTED: hypothetical protein 
LOC100132733          0.006   PREDICTED: hypothetical protein 
LOC100287935          0.006   PREDICTED: hypothetical protein XP_002342146 
SPNS1                 0.006   spinster homolog 1 isoform 2 
SPNS1                 0.006   spinster homolog 1 isoform 1 
SPNS1                 0.006   spinster homolog 1 isoform 1 
SLC2A9                0.006   solute carrier family 2, member 9 protein isoform 2 ...
SLC2A9                0.006   solute carrier family 2, member 9 protein isoform 1 ...
ARX                   0.006   aristaless related homeobox 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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