Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF259 Sequence: fasta or formatted (459aa) NCBI GI: 4508021
Description:

zinc finger protein 259

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         37           2
 C cysteine            2.2         10           1
 D aspartate           5.7         26           2
 E glutamate          10.9         50           3
 F phenylalanine       3.7         17           2
 G glycine             5.9         27           2
 H histidine           1.7          8           1
 I isoleucine          5.7         26           2
 K lysine              4.6         21           1
 L leucine             8.1         37           3
 M methionine          3.1         14           1
 N asparagine          5.0         23           2
 P proline             7.2         33           3
 Q glutamine           5.0         23           2
 R arginine            5.0         23           2
 S serine              5.2         24           2
 T threonine           6.5         30           2
 V valine              4.8         22           2
 W tryptophan          0.2          1           1
 Y tyrosine            1.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 259 
C15orf39              0.017   hypothetical protein LOC56905 
AKT1S1                0.014   AKT1 substrate 1 (proline-rich) 
AKT1S1                0.014   AKT1 substrate 1 (proline-rich) 
AKT1S1                0.014   AKT1 substrate 1 (proline-rich) 
WAS                   0.011   Wiskott-Aldrich syndrome protein 
IRX5                  0.011   iroquois homeobox protein 5 
RIMBP3B               0.011   RIMS binding protein 3B 
RIMBP3C               0.011   RIMS binding protein 3C 
ZIC5                  0.011   zinc finger protein of the cerebellum 5 
BOC                   0.011   brother of CDO 
CDKN1C                0.010   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.010   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.010   cyclin-dependent kinase inhibitor 1C isoform a 
PANX2                 0.010   pannexin 2 isoform 1 
PANX2                 0.010   pannexin 2 isoform 2 
HCN2                  0.010   hyperpolarization activated cyclic nucleotide-gated...
HOXD4                 0.009   homeobox D4 
ASXL3                 0.009   additional sex combs like 3 
TRRAP                 0.009   transformation/transcription domain-associated protei...
CHMP4A                0.009   chromatin modifying protein 4A 
RIMBP3                0.009   DKFZP434H0735 protein 
SAMD1                 0.009   sterile alpha motif domain containing 1 
COL5A2                0.009   alpha 2 type V collagen preproprotein 
RANBP9                0.009   RAN binding protein 9 
LOC100287907          0.009   PREDICTED: hypothetical protein 
LOC100287907          0.009   PREDICTED: hypothetical protein XP_002343168 
FNBP4                 0.009   formin binding protein 4 
SHANK1                0.009   SH3 and multiple ankyrin repeat domains 1 
PRR12                 0.009   proline rich 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press