Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NCF4 Sequence: fasta or formatted (339aa) NCBI GI: 47519798
Description:

neutrophil cytosolic factor 4 isoform 1

Referenced in:

Neutrophils, Eosinophils, and Basophils
Superoxide Pathway

Other entries for this name:
alt prot [348aa] neutrophil cytosolic factor 4 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         25           2
 C cysteine            0.6          2           1
 D aspartate           7.4         25           2
 E glutamate           7.1         24           2
 F phenylalanine       5.0         17           2
 G glycine             3.8         13           2
 H histidine           0.9          3           1
 I isoleucine          5.0         17           1
 K lysine              6.2         21           1
 L leucine            11.2         38           2
 M methionine          2.1          7           1
 N asparagine          2.9         10           1
 P proline             5.3         18           1
 Q glutamine           4.1         14           2
 R arginine            8.0         27           2
 S serine              6.8         23           2
 T threonine           4.4         15           1
 V valine              6.8         23           1
 W tryptophan          1.2          4           1
 Y tyrosine            3.8         13           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neutrophil cytosolic factor 4 isoform 1 
NCF4                  0.745   neutrophil cytosolic factor 4 isoform 2 
SH3PXD2B              0.065   SH3 and PX domains 2B 
SH3PXD2A              0.062   SH3 multiple domains 1 
SH3D19                0.059   SH3 domain containing 19 isoform c 
SH3D19                0.059   SH3 domain containing 19 isoform b 
SH3D19                0.059   SH3 domain containing 19 isoform a 
SH3RF1                0.056   SH3 domain containing ring finger 1 
SH3GL1                0.054   SH3-domain GRB2-like 1 
SH3GL2                0.052   SH3-domain GRB2-like 2 
SORBS2                0.051   sorbin and SH3 domain containing 2 isoform 8 
SORBS2                0.051   sorbin and SH3 domain containing 2 isoform 7 
SORBS2                0.051   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.051   sorbin and SH3 domain containing 2 isoform 5 
SORBS2                0.051   sorbin and SH3 domain containing 2 isoform 4 
SORBS2                0.051   sorbin and SH3 domain containing 2 isoform 3 
SH3GL3                0.051   SH3-domain GRB2-like 3 
SORBS2                0.051   sorbin and SH3 domain containing 2 isoform 2 
SORBS2                0.051   sorbin and SH3 domain containing 2 isoform 1 
NCF1                  0.051   neutrophil cytosolic factor 1 
NCF2                  0.048   neutrophil cytosolic factor 2 
NCF2                  0.048   neutrophil cytosolic factor 2 
SH3RF2                0.046   SH3 domain containing ring finger 2 
ITSN1                 0.046   intersectin 1 isoform ITSN-l 
SORBS3                0.045   sorbin and SH3 domain containing 3 isoform 1 
SORBS3                0.045   sorbin and SH3 domain containing 3 isoform 2 
ITSN2                 0.043   intersectin 2 isoform 3 
ITSN2                 0.043   intersectin 2 isoform 1 
ITSN2                 0.043   intersectin 2 isoform 2 
DNMBP                 0.042   dynamin binding protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press