Guide to the Human Genome
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Name: RPL19 Sequence: fasta or formatted (196aa) NCBI GI: 4506609
Description:

ribosomal protein L19

Referenced in:

Ribosomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         14           1
 C cysteine            1.0          2           1
 D aspartate           2.6          5           1
 E glutamate           7.1         14           3
 F phenylalanine       0.5          1           1
 G glycine             3.6          7           1
 H histidine           3.1          6           1
 I isoleucine          6.1         12           2
 K lysine             16.3         32           3
 L leucine             9.7         19           2
 M methionine          4.1          8           1
 N asparagine          4.1          8           1
 P proline             1.5          3           1
 Q glutamine           2.6          5           2
 R arginine           15.8         31           2
 S serine              4.6          9           2
 T threonine           4.1          8           1
 V valine              3.6          7           1
 W tryptophan          1.0          2           1
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein L19 
INCENP                0.042   inner centromere protein antigens 135/155kDa isofor...
TCHH                  0.042   trichohyalin 
INCENP                0.042   inner centromere protein antigens 135/155kDa isofor...
LOC100133599          0.033   PREDICTED: hypothetical protein 
KIAA1751              0.031   hypothetical protein LOC85452 
CHAF1A                0.031   chromatin assembly factor 1, subunit A (p150) 
EZR                   0.031   ezrin 
EZR                   0.031   ezrin 
EIF5B                 0.028   eukaryotic translation initiation factor 5B 
RSRC1                 0.028   arginine/serine-rich coiled-coil 1 
UPF2                  0.028   UPF2 regulator of nonsense transcripts homolog [Homo...
UPF2                  0.028   UPF2 regulator of nonsense transcripts homolog [Homo...
GIGYF2                0.028   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.028   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.028   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.028   GRB10 interacting GYF protein 2 isoform b 
LOC100294088          0.028   PREDICTED: hypothetical protein, partial 
ITSN2                 0.028   intersectin 2 isoform 1 
ITSN2                 0.028   intersectin 2 isoform 2 
SFRS17A               0.025   DNA segment on chromosome X and Y (unique) 155 expre...
GOLGA4                0.025   golgi autoantigen, golgin subfamily a, 4 
ANKHD1                0.025   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.025   ANKHD1-EIF4EBP3 protein 
BAZ1A                 0.025   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.025   bromodomain adjacent to zinc finger domain, 1A isofo...
ITSN2                 0.025   intersectin 2 isoform 3 
SFRS18                0.025   splicing factor, arginine/serine-rich 130 
SFRS18                0.025   splicing factor, arginine/serine-rich 130 
MAP7D1                0.025   MAP7 domain containing 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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