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Search of human proteins with 4506609
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506609 ribosomal protein L19 [Homo sapiens]
(196 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506609 ribosomal protein L19 [Homo sapiens] 385 e-108
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 40 0.001
gi|148746195 trichohyalin [Homo sapiens] 40 0.002
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 40 0.002
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 37 0.011
gi|122937416 hypothetical protein LOC85452 [Homo sapiens] 36 0.018
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 36 0.018
gi|161702986 ezrin [Homo sapiens] 36 0.024
gi|21614499 ezrin [Homo sapiens] 36 0.024
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 35 0.031
gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens] 35 0.041
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo... 35 0.041
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo... 35 0.041
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 35 0.053
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 35 0.053
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 35 0.053
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 35 0.053
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 35 0.053
gi|194294521 intersectin 2 isoform 1 [Homo sapiens] 35 0.053
gi|194294525 intersectin 2 isoform 2 [Homo sapiens] 35 0.053
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre... 34 0.070
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 34 0.070
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ... 34 0.070
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens] 34 0.070
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 34 0.070
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 34 0.070
gi|194294523 intersectin 2 isoform 3 [Homo sapiens] 34 0.070
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 34 0.070
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap... 34 0.070
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 34 0.070
>gi|4506609 ribosomal protein L19 [Homo sapiens]
Length = 196
Score = 385 bits (990), Expect = e-108
Identities = 196/196 (100%), Positives = 196/196 (100%)
Query: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120
Query: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180
HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180
Query: 181 KEEIIKTLSKEEETKK 196
KEEIIKTLSKEEETKK
Sbjct: 181 KEEIIKTLSKEEETKK 196
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 40.0 bits (92), Expect = 0.001
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 38 RQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMR 97
R ++ IK +R R R RRK + ++K + R + ++
Sbjct: 513 RSVMKSFIKRNTPLRMDPKEKERQRLEN---LRRKEEAEQLRRQKVEEDKRRRLEEVKLK 569
Query: 98 RMRILRRLLR---RYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKL 154
R LR++L+ R + K+ + + ++ K K +L +KA+KK
Sbjct: 570 REERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKE------ERLAEEKAKKKA 623
Query: 155 LA---DQAEARRSKTKEARK-----------RREERLQAKKEEIIKTLSKEEETKK 196
A ++ EARR + +EAR+ R +E LQ KKEE + L K E K+
Sbjct: 624 AAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAEAKR 679
Score = 30.8 bits (68), Expect = 0.77
Identities = 32/161 (19%), Positives = 72/161 (44%), Gaps = 13/161 (8%)
Query: 31 EIANANSRQQIRKLIKDGLIIRKPVTVHSRA-RCRKNTLARRKGRHMGIGKRKGTANARM 89
++ A R + K K I +K + + + ++ LA K + K+ AR
Sbjct: 576 KVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARR 635
Query: 90 PE-----KVTWMRRMRILRR---LLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEH 141
+ ++ W+++ RR LL++ +E ++ + + K + +R E
Sbjct: 636 KQEEEARRLRWLQQEEEERRHQELLQKKKEEEQ--ERLRKAAEAKRLAEQREQERREQER 693
Query: 142 IHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKE 182
+ + ++ R++ ++ E R ++ R+R +ERLQA++E
Sbjct: 694 REQERREQERRE--QERREQERQLAEQERRREQERLQAERE 732
Score = 30.8 bits (68), Expect = 0.77
Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 70 RRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKG 129
+ K + K K A A+ E+V R+ R LR ++ ++ RH
Sbjct: 608 KAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQ---------- 657
Query: 130 NVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRRE-ERLQAKKEEIIKTL 188
+ + K+ E +L+ K+L + + RR + + ++RRE ER + ++ E + L
Sbjct: 658 ELLQKKK--EEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQL 715
Query: 189 SKEEETKK 196
+++E ++
Sbjct: 716 AEQERRRE 723
Score = 27.7 bits (60), Expect = 6.5
Identities = 37/182 (20%), Positives = 76/182 (41%), Gaps = 14/182 (7%)
Query: 24 LDPNETNEIANANSR-----QQIR--KLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHM 76
+DP E N R +Q+R K+ +D + V + R RK AR + M
Sbjct: 528 MDPKEKERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQM 587
Query: 77 GIGKRKGTAN--ARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKN 134
K+K A++ EK + R+ ++ +KK++ K + +
Sbjct: 588 KEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARR---KQEEEARRL 644
Query: 135 KRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEET 194
+ + E + + +KK ++ + R K EA++ E+R Q ++E+ + + E+
Sbjct: 645 RWLQQEEEERRHQELLQKK--KEEEQERLRKAAEAKRLAEQREQERREQERREQERREQE 702
Query: 195 KK 196
++
Sbjct: 703 RR 704
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 39.7 bits (91), Expect = 0.002
Identities = 20/91 (21%), Positives = 48/91 (52%)
Query: 106 LRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
L+R E +++ + + L+ + + + + E +L+ ++ ++L +Q E R
Sbjct: 519 LKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKREQEERRDQL 578
Query: 166 TKEARKRREERLQAKKEEIIKTLSKEEETKK 196
K +RR++RL+ ++EE ++ K EE ++
Sbjct: 579 LKREEERRQQRLKREQEERLEQRLKREEVER 609
Score = 36.6 bits (83), Expect = 0.014
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 106 LRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSK 165
LRR ++ ++ ++ + L+ + + + +++ E + + R++ L + E R +
Sbjct: 377 LRREQQLRR-EQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHE 435
Query: 166 TKEARKRREERLQAKKEEIIKTLSKEEETKK 196
K ++RRE+RL+ ++EE L +EEET++
Sbjct: 436 QKHEQERREQRLKREQEERRDWLKREEETER 466
Score = 34.7 bits (78), Expect = 0.053
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 91 EKVTWMRRMRILRRLLRR---YRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKA 147
E+ +R R RRL R YRE +++ + L + + + + ++ + +
Sbjct: 1029 EEEQLLREEREKRRLQERERQYREEEELQQE--EEQLLGEERETRRRQELERQYRKEEEL 1086
Query: 148 DKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
+ ++LL ++ E RR + +E + R EE LQ ++E+++ +EE K+
Sbjct: 1087 QQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLL----REEREKR 1131
Score = 32.3 bits (72), Expect = 0.26
Identities = 23/99 (23%), Positives = 50/99 (50%), Gaps = 26/99 (26%)
Query: 121 HSLYLK--VKGNVFKNKRILMEHIHKLKADKARKK---------------------LLAD 157
H+LY K ++ + K +++L E +L+ ++ K+ LL +
Sbjct: 887 HTLYAKPALQEQLRKEQQLLQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLRE 946
Query: 158 QAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
+ E RR + +E + R++++LQ K+E++ L +E E ++
Sbjct: 947 EREKRRRQERERQYRKDKKLQQKEEQL---LGEEPEKRR 982
Score = 31.6 bits (70), Expect = 0.45
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 146 KADKARKKLLA----DQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
+AD + K+ + + + RR + +E R+RRE LQ ++EE +EEE ++
Sbjct: 711 EADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQWQEEERAHRQQQEEEQRR 765
Score = 30.8 bits (68), Expect = 0.77
Identities = 27/114 (23%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 96 MRRMRILRR---LLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILM--EHIHKLKADKA 150
+RR + LRR L R E + +H ++K + + L E + + ++
Sbjct: 413 LRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERR 472
Query: 151 RKKLLADQAEARRSK--------TKEARKRREERLQAKKEEIIKTLSKEEETKK 196
+++L DQ E RR + +E ++RRE++L+ ++EE + K +E ++
Sbjct: 473 KQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEE 526
Score = 30.8 bits (68), Expect = 0.77
Identities = 23/113 (20%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA 156
R R L+ R+YRE +++ + L + + + + ++ + + + ++LL
Sbjct: 1038 REKRRLQERERQYREEEELQQE--EEQLLGEERETRRRQELERQYRKEEELQQEEEQLLR 1095
Query: 157 DQAEARRSKTKEARKRREERLQ-------------AKKEEIIKTLSKEEETKK 196
++ E RR + +E + R EE LQ +++E+ + +EEE ++
Sbjct: 1096 EEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQ 1148
Score = 30.0 bits (66), Expect = 1.3
Identities = 25/129 (19%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 70 RRKGRHMGIGKRKGTANA--RMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKV 127
RRKGR +R+ + + E+ W +R +LR+ + +E + + ++
Sbjct: 219 RRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQL 278
Query: 128 KGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKT 187
+ + R + + + R++ L + E R + +E R+ ++ER + ++E +
Sbjct: 279 RKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQ 338
Query: 188 LSKEEETKK 196
L +E+E ++
Sbjct: 339 LRREQEERR 347
Score = 30.0 bits (66), Expect = 1.3
Identities = 27/138 (19%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 64 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESK-KIDRHMYHS 122
R+ L R + + + +R+ E+ + + RR R RE + ++++ +
Sbjct: 546 REQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKRE 605
Query: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKT--KEARKRREERLQAK 180
+++ + +R+ E + ++ ++ L +++ E RR + +E ++RRE+RL+ +
Sbjct: 606 EVERLEQEERREQRLKREEPEE---ERRQQLLKSEEQEERRQQQLRREQQERREQRLKRE 662
Query: 181 KEE--IIKTLSKEEETKK 196
+EE + + L +E E ++
Sbjct: 663 EEEERLEQRLKREHEEER 680
Score = 30.0 bits (66), Expect = 1.3
Identities = 21/106 (19%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA 156
R+ R +LL+ RE +++ R +L+ + + + +R +L++ + +K L
Sbjct: 1461 RKFREEEQLLQE-REEQQLHRQERDRKFLEEEQQLRRQERDRKFREQELRSQEPERKFLE 1519
Query: 157 DQAEARRSKTK------EARKRREERLQAKKEEIIKTLSKEEETKK 196
++ + R + + E + RR+ER Q ++++ + +EE+ ++
Sbjct: 1520 EEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQ 1565
Score = 30.0 bits (66), Expect = 1.3
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 135 KRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK-------RREERLQAKKEEIIKT 187
+R +E +L + ++K L ++ + RR + + R+ R EE+L+ ++EE +
Sbjct: 1514 ERKFLEEEQQLHRQQRQRKFLQEEQQLRRQERGQQRRQDRDRKFREEEQLRQEREE--QQ 1571
Query: 188 LSKEEETKK 196
LS++E +K
Sbjct: 1572 LSRQERDRK 1580
Score = 29.3 bits (64), Expect = 2.2
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Query: 138 LMEHIHKLKADKARK----KLLADQAEARRSKTK----EARKRREERLQAKKEEIIKTLS 189
L E +L+ ++ R+ + A Q ++RR + + E +KRR+ER + +EE I+
Sbjct: 1830 LEEQEQRLRQERDRQYRAEEQFATQEKSRREEQELWQEEEQKRRQERERKLREEHIRRQQ 1889
Query: 190 KEEE 193
KEE+
Sbjct: 1890 KEEQ 1893
Score = 27.7 bits (60), Expect = 6.5
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA 156
R+ R +LL+ RE +++ R +L+ + + + +R + + + ++LL
Sbjct: 1619 RKFREDEQLLQE-REEQQLHRQERDRKFLEEEPQLRRQEREQQLRHDRDRKFREEEQLLQ 1677
Query: 157 DQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEE 193
+ E + + + RK REE Q +++E + +EE+
Sbjct: 1678 EGEEQQLRRQERDRKFREEEQQLRRQERERKFLQEEQ 1714
Score = 27.3 bits (59), Expect = 8.5
Identities = 15/101 (14%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Query: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA 156
RR ++L+R + E ++ ++ + + + + + + + + + ++ ++L
Sbjct: 545 RREQLLKREEEKRLEQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKR 604
Query: 157 DQAEA-RRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
++ E + + +E R +REE + ++++++K+ +EE ++
Sbjct: 605 EEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQ 645
Score = 27.3 bits (59), Expect = 8.5
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 146 KADKARKKLLADQAEARRSKTKEARK-RREERLQAKKEEIIKTLSKEEETKK 196
+ + K+LL ++ E +R + + RK R EE+L ++EE + L ++E +K
Sbjct: 1312 RKSQEEKQLLREEREEKRRRQETDRKFREEEQLLQEREE--QPLRRQERDRK 1361
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 39.7 bits (91), Expect = 0.002
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 23/144 (15%)
Query: 70 RRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLR---RYRESKKIDRHMYHSLYLK 126
RRK + ++K + R + ++R LR++L+ R + K+ + + +
Sbjct: 546 RRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQ 605
Query: 127 VKGNVFKNKRILMEHIHKLKADKARKKLLA---DQAEARRSKTKEARK-----------R 172
+ K K +L +KA+KK A ++ EARR + +EAR+ R
Sbjct: 606 IDEKTEKAKE------ERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERR 659
Query: 173 REERLQAKKEEIIKTLSKEEETKK 196
+E LQ KKEE + L K E K+
Sbjct: 660 HQELLQKKKEEEQERLRKAAEAKR 683
Score = 30.8 bits (68), Expect = 0.77
Identities = 32/161 (19%), Positives = 72/161 (44%), Gaps = 13/161 (8%)
Query: 31 EIANANSRQQIRKLIKDGLIIRKPVTVHSRA-RCRKNTLARRKGRHMGIGKRKGTANARM 89
++ A R + K K I +K + + + ++ LA K + K+ AR
Sbjct: 580 KVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARR 639
Query: 90 PE-----KVTWMRRMRILRR---LLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEH 141
+ ++ W+++ RR LL++ +E ++ + + K + +R E
Sbjct: 640 KQEEEARRLRWLQQEEEERRHQELLQKKKEEEQ--ERLRKAAEAKRLAEQREQERREQER 697
Query: 142 IHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKE 182
+ + ++ R++ ++ E R ++ R+R +ERLQA++E
Sbjct: 698 REQERREQERRE--QERREQERQLAEQERRREQERLQAERE 736
Score = 30.8 bits (68), Expect = 0.77
Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 70 RRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKG 129
+ K + K K A A+ E+V R+ R LR ++ ++ RH
Sbjct: 612 KAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQ---------- 661
Query: 130 NVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRRE-ERLQAKKEEIIKTL 188
+ + K+ E +L+ K+L + + RR + + ++RRE ER + ++ E + L
Sbjct: 662 ELLQKKK--EEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQL 719
Query: 189 SKEEETKK 196
+++E ++
Sbjct: 720 AEQERRRE 727
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 37.0 bits (84), Expect = 0.011
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 60 RARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHM 119
R R +K R+K + +G R ++ R+ R + +R +E KK +R
Sbjct: 56 RERGKKEKKKRKK-------RERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQ 108
Query: 120 YHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQA 179
K K +R E +K + ++ RKK + R + KE KR +R +
Sbjct: 109 RGRRERKKK-----KERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKR 163
Query: 180 KKEEIIKTLSKEEETKK 196
KKEE K + + +K
Sbjct: 164 KKEEREKKRERNRKERK 180
Score = 35.4 bits (80), Expect = 0.031
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 11/140 (7%)
Query: 60 RARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHM 119
R R RK +RK R R+ R EK R+ R RR ++ +E K+ +R
Sbjct: 75 RERKRKEREKQRKER------REKERRKRKKEKKKRERKQRG-RRERKKKKERKEREREN 127
Query: 120 YHSLYLKVKGNVFKNKRILMEHIHKL-KADKARKKLLADQAEARRSKTKEARKR---REE 175
K K K +R + + K ++ RKK ++ E +R + ++ RK+ R+E
Sbjct: 128 KQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKE 187
Query: 176 RLQAKKEEIIKTLSKEEETK 195
R + KKE + K+E K
Sbjct: 188 RRERKKERKKERRKKKERKK 207
Score = 32.3 bits (72), Expect = 0.26
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 22/135 (16%)
Query: 62 RCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYH 121
R RK +R+ + G +RK + E+ RR R +R RR ++ +K +
Sbjct: 95 RKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRER--KRKKRRKKKRRKERKRE-- 150
Query: 122 SLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 181
K +G + ++ + + K ++ RK+ R K +E ++RRE + + KK
Sbjct: 151 ----KERGKRERKRKKRKKEEREKKRERNRKE---------RKKERERKERRERKKERKK 197
Query: 182 EEIIKTLSKEEETKK 196
E K++E KK
Sbjct: 198 ER-----RKKKERKK 207
>gi|122937416 hypothetical protein LOC85452 [Homo sapiens]
Length = 762
Score = 36.2 bits (82), Expect = 0.018
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 28/143 (19%)
Query: 74 RHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLK------- 126
+ +G+ +K +AR KV +R L+ L R RE +K + H +
Sbjct: 232 KELGLRHQKLLEDARKNHKVA----VRFLKASLGRIREQEKKEEMECHEYMRRRMDAVVA 287
Query: 127 VKGNVFKNKRILME---------HIHKLKADKARKKLLADQAEA-------RRSKTKEAR 170
+KG++ N+ L + + + + +K +LA +A RR + EA+
Sbjct: 288 LKGSISANRDTLRKFQAWDRAKAELAEQRVQAEKKAILAQGRDAFRHLVHQRRRQELEAQ 347
Query: 171 KRR-EERLQAKKEEIIKTLSKEE 192
KR EE + +K+EII + KEE
Sbjct: 348 KRAFEEEQKLRKQEIISRILKEE 370
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 36.2 bits (82), Expect = 0.018
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 9/75 (12%)
Query: 127 VKGNVFKNKRILMEHIH------KLKADKARKKLLADQAEARRSKTKEARKRREERLQAK 180
VKG+ KNK L KL+A++ K+ L + EA+R+K +EA+K++EE + K
Sbjct: 326 VKGSTEKNKLRLQRDQERLGKQLKLRAEREEKEKLKE--EAKRAK-EEAKKKKEEEKELK 382
Query: 181 KEEIIKTLSKEEETK 195
++E + K+E+ K
Sbjct: 383 EKERREKREKDEKEK 397
Score = 30.4 bits (67), Expect = 1.0
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 133 KNKRILMEHIHKLKADKARKK--LLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSK 190
K +R E K KA+K R K ++ EA +K +E RK+ EE+ ++E+ IK
Sbjct: 384 KERREKREKDEKEKAEKQRLKEERRKERQEALEAKLEEKRKKEEEKRLREEEKRIKAEKA 443
Query: 191 E 191
E
Sbjct: 444 E 444
Score = 28.1 bits (61), Expect = 5.0
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 140 EHIHKLKADKARKKLLADQAE-ARRSKTKEARKRREERLQAKKEEIIKTLSKEEETK 195
E +LK + R+K D+ E A + + KE +RR+ER +A + ++ + KEEE +
Sbjct: 376 EEEKELKEKERREKREKDEKEKAEKQRLKE--ERRKERQEALEAKLEEKRKKEEEKR 430
>gi|161702986 ezrin [Homo sapiens]
Length = 586
Score = 35.8 bits (81), Expect = 0.024
Identities = 25/110 (22%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 88 RMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIH-KLK 146
+ P+ V + R+RI +R+L+ + H LY++ + K I ++ + + +
Sbjct: 263 KAPDFVFYAPRLRINKRILQLCMGN--------HELYMRRR----KPDTIEVQQMKAQAR 310
Query: 147 ADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
+K +K+L Q E + + + + +E+ ++ K+E +++ EE+TKK
Sbjct: 311 EEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKK 360
Score = 28.5 bits (62), Expect = 3.8
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 60 RARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHM 119
R R K L G H +R+ + + R + ++L R+ E++K R
Sbjct: 273 RLRINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRET 332
Query: 120 YHSLYLKVKGNVFKNKRILMEHI--HKLKADKARKKLLADQAEARRSKTKEARKRREERL 177
+ K + + K LM + ++ K KA ++L ++Q + R + +E RKR +E
Sbjct: 333 VE----REKEQMMREKEELMLRLQDYEEKTKKAEREL-SEQIQ-RALQLEEERKRAQEEA 386
Query: 178 QAKKEEIIKTLSKEEETKK 196
+ + + + L +EE ++
Sbjct: 387 ERLEADRMAALRAKEELER 405
>gi|21614499 ezrin [Homo sapiens]
Length = 586
Score = 35.8 bits (81), Expect = 0.024
Identities = 25/110 (22%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 88 RMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIH-KLK 146
+ P+ V + R+RI +R+L+ + H LY++ + K I ++ + + +
Sbjct: 263 KAPDFVFYAPRLRINKRILQLCMGN--------HELYMRRR----KPDTIEVQQMKAQAR 310
Query: 147 ADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
+K +K+L Q E + + + + +E+ ++ K+E +++ EE+TKK
Sbjct: 311 EEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKK 360
Score = 28.5 bits (62), Expect = 3.8
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 60 RARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHM 119
R R K L G H +R+ + + R + ++L R+ E++K R
Sbjct: 273 RLRINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRET 332
Query: 120 YHSLYLKVKGNVFKNKRILMEHI--HKLKADKARKKLLADQAEARRSKTKEARKRREERL 177
+ K + + K LM + ++ K KA ++L ++Q + R + +E RKR +E
Sbjct: 333 VE----REKEQMMREKEELMLRLQDYEEKTKKAEREL-SEQIQ-RALQLEEERKRAQEEA 386
Query: 178 QAKKEEIIKTLSKEEETKK 196
+ + + + L +EE ++
Sbjct: 387 ERLEADRMAALRAKEELER 405
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 35.4 bits (80), Expect = 0.031
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 126 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEII 185
K KG + + E + KLK ++ R+K ++ +R + EA+++ EERL+ +K E
Sbjct: 332 KKKGPSKATVKAMQEALAKLKEEEERQKR-EEEERIKRLEELEAKRKEEERLEQEKRERK 390
Query: 186 KTLSKEEETK 195
K KE + +
Sbjct: 391 KQKEKERKER 400
Score = 28.5 bits (62), Expect = 3.8
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
K + G + K + P K T L +L K+ + L +++
Sbjct: 318 KKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLE-ELEAKR 376
Query: 132 FKNKRILMEHIHKLKA-DKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSK 190
+ +R+ E + K +K RK+ L + + +EAR R E L+ + + ++ SK
Sbjct: 377 KEEERLEQEKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATLKLLQAQGVEVPSK 436
Query: 191 EEETKK 196
+ KK
Sbjct: 437 DSLPKK 442
Score = 28.1 bits (61), Expect = 5.0
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 126 KVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEII 185
K K + K K E + K ++ + A Q + K +E R++REE + K+ E +
Sbjct: 313 KKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEEERIKRLEEL 372
Query: 186 KTLSKEEE 193
+ KEEE
Sbjct: 373 EAKRKEEE 380
>gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
Length = 334
Score = 35.0 bits (79), Expect = 0.041
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 8/138 (5%)
Query: 59 SRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRH 118
S++R R++ R H +R R + R R R +R +E K
Sbjct: 101 SKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRD---RERRKGRDKEKREKEKDKGKDK 157
Query: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQ 178
H++ GN+ + +EH+ + KAR +L+ +A A+ + +A++R EE +
Sbjct: 158 ELHNIKRGESGNI----KAGLEHLPPAEQAKARLQLVL-EAAAKADEALKAKERNEEEAK 212
Query: 179 AKKEEIIKTLSKEEETKK 196
+KEE TL ++ + K
Sbjct: 213 RRKEEDQATLVEQVKRVK 230
>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 35.0 bits (79), Expect = 0.041
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 146 KADKARKKLLADQAEARRSKTKEARKRREERLQA-----KKEEIIKTLSKEEETKK 196
KA + +KK L D + R+ + KE +K+ EE+++A KKEE K +EEE KK
Sbjct: 51 KAPEDKKKRLED--DKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKK 104
Score = 30.0 bits (66), Expect = 1.3
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 133 KNKRILMEHIHKLKADKARKKLLADQ--AEARRSKTKEARKRREERLQAKKEEIIKTLSK 190
++K+ +E + K DK RKK ++ AE K +E K++ + + KK+E +
Sbjct: 54 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQ 113
Query: 191 EEE 193
EEE
Sbjct: 114 EEE 116
Score = 30.0 bits (66), Expect = 1.3
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 144 KLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEE 193
K+KA++ KK + E ++ +E RK++EE+ + ++EE KE+E
Sbjct: 79 KVKAEEESKK---KEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKE 125
Score = 27.3 bits (59), Expect = 8.5
Identities = 14/59 (23%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 135 KRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEE 193
+++ E K K ++ +KK Q E R+ + ++A++++EE A+ +E +++ +E
Sbjct: 78 EKVKAEEESKKKEEEEKKK---HQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQE 133
>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 35.0 bits (79), Expect = 0.041
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 146 KADKARKKLLADQAEARRSKTKEARKRREERLQA-----KKEEIIKTLSKEEETKK 196
KA + +KK L D + R+ + KE +K+ EE+++A KKEE K +EEE KK
Sbjct: 51 KAPEDKKKRLED--DKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKK 104
Score = 30.0 bits (66), Expect = 1.3
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 133 KNKRILMEHIHKLKADKARKKLLADQ--AEARRSKTKEARKRREERLQAKKEEIIKTLSK 190
++K+ +E + K DK RKK ++ AE K +E K++ + + KK+E +
Sbjct: 54 EDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQ 113
Query: 191 EEE 193
EEE
Sbjct: 114 EEE 116
Score = 30.0 bits (66), Expect = 1.3
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 144 KLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEE 193
K+KA++ KK + E ++ +E RK++EE+ + ++EE KE+E
Sbjct: 79 KVKAEEESKK---KEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKE 125
Score = 27.3 bits (59), Expect = 8.5
Identities = 14/59 (23%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 135 KRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEE 193
+++ E K K ++ +KK Q E R+ + ++A++++EE A+ +E +++ +E
Sbjct: 78 EKVKAEEESKKKEEEEKKK---HQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQE 133
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
sapiens]
Length = 1293
Score = 34.7 bits (78), Expect = 0.053
Identities = 16/58 (27%), Positives = 34/58 (58%)
Query: 139 MEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
+E + +L+ KA K + R+K +E ++R+E L+ ++EEI++ +EE ++
Sbjct: 717 LEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRR 774
Score = 34.3 bits (77), Expect = 0.070
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 60 RARCRKNTLARRKGRH-MGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRH 118
R R + LARRK + + + A R E+ ++ LRRL R RE + +R
Sbjct: 771 RKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEE--ERR 828
Query: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQ 178
L K + K R E +L+ ++ R ++ AR +E RKR+E +Q
Sbjct: 829 KQEELLRKQEEEAAKWAREEEEAQRRLEENRLRM----EEEAARLRHEEEERKRKELEVQ 884
Query: 179 AKKEEIIKTLSKEEETKK 196
+KE + + ++E ++
Sbjct: 885 RQKELMRQRQQQQEALRR 902
Score = 31.6 bits (70), Expect = 0.45
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 144 KLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
KL+ ++ ++ A + E R + +E R+++EE L+ ++EE K +EE ++
Sbjct: 730 KLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARR 782
Score = 30.8 bits (68), Expect = 0.77
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRR----LLRRYRESKKIDRHMYHSLYLKV 127
K + + + + A R + +R LRR +LRR +E ++ R L +
Sbjct: 725 KAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEER-KRREEEELARRK 783
Query: 128 KGNVFKNKRILMEHIHKLKADKARKKLLADQAEA-----RRSKTKEARKRREERLQAKKE 182
+ + +R + + + ++ R++ Q EA R + +E R+++EE L+ ++E
Sbjct: 784 QEEALRRQREQEIALRRQREEEERQQ----QEEALRRLEERRREEEERRKQEELLRKQEE 839
Query: 183 EIIKTLSKEEETKK 196
E K +EEE ++
Sbjct: 840 EAAKWAREEEEAQR 853
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
sapiens]
Length = 1320
Score = 34.7 bits (78), Expect = 0.053
Identities = 16/58 (27%), Positives = 34/58 (58%)
Query: 139 MEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
+E + +L+ KA K + R+K +E ++R+E L+ ++EEI++ +EE ++
Sbjct: 744 LEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRR 801
Score = 34.3 bits (77), Expect = 0.070
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 60 RARCRKNTLARRKGRH-MGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRH 118
R R + LARRK + + + A R E+ ++ LRRL R RE + +R
Sbjct: 798 RKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEE--ERR 855
Query: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQ 178
L K + K R E +L+ ++ R ++ AR +E RKR+E +Q
Sbjct: 856 KQEELLRKQEEEAAKWAREEEEAQRRLEENRLRM----EEEAARLRHEEEERKRKELEVQ 911
Query: 179 AKKEEIIKTLSKEEETKK 196
+KE + + ++E ++
Sbjct: 912 RQKELMRQRQQQQEALRR 929
Score = 31.6 bits (70), Expect = 0.45
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 144 KLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
KL+ ++ ++ A + E R + +E R+++EE L+ ++EE K +EE ++
Sbjct: 757 KLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARR 809
Score = 30.8 bits (68), Expect = 0.77
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRR----LLRRYRESKKIDRHMYHSLYLKV 127
K + + + + A R + +R LRR +LRR +E ++ R L +
Sbjct: 752 KAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEER-KRREEEELARRK 810
Query: 128 KGNVFKNKRILMEHIHKLKADKARKKLLADQAEA-----RRSKTKEARKRREERLQAKKE 182
+ + +R + + + ++ R++ Q EA R + +E R+++EE L+ ++E
Sbjct: 811 QEEALRRQREQEIALRRQREEEERQQ----QEEALRRLEERRREEEERRKQEELLRKQEE 866
Query: 183 EIIKTLSKEEETKK 196
E K +EEE ++
Sbjct: 867 EAAKWAREEEEAQR 880
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 34.7 bits (78), Expect = 0.053
Identities = 16/58 (27%), Positives = 34/58 (58%)
Query: 139 MEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
+E + +L+ KA K + R+K +E ++R+E L+ ++EEI++ +EE ++
Sbjct: 723 LEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRR 780
Score = 34.3 bits (77), Expect = 0.070
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 60 RARCRKNTLARRKGRH-MGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRH 118
R R + LARRK + + + A R E+ ++ LRRL R RE + +R
Sbjct: 777 RKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEE--ERR 834
Query: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQ 178
L K + K R E +L+ ++ R ++ AR +E RKR+E +Q
Sbjct: 835 KQEELLRKQEEEAAKWAREEEEAQRRLEENRLRM----EEEAARLRHEEEERKRKELEVQ 890
Query: 179 AKKEEIIKTLSKEEETKK 196
+KE + + ++E ++
Sbjct: 891 RQKELMRQRQQQQEALRR 908
Score = 31.6 bits (70), Expect = 0.45
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 144 KLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
KL+ ++ ++ A + E R + +E R+++EE L+ ++EE K +EE ++
Sbjct: 736 KLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARR 788
Score = 30.8 bits (68), Expect = 0.77
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRR----LLRRYRESKKIDRHMYHSLYLKV 127
K + + + + A R + +R LRR +LRR +E ++ R L +
Sbjct: 731 KAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEER-KRREEEELARRK 789
Query: 128 KGNVFKNKRILMEHIHKLKADKARKKLLADQAEA-----RRSKTKEARKRREERLQAKKE 182
+ + +R + + + ++ R++ Q EA R + +E R+++EE L+ ++E
Sbjct: 790 QEEALRRQREQEIALRRQREEEERQQ----QEEALRRLEERRREEEERRKQEELLRKQEE 845
Query: 183 EIIKTLSKEEETKK 196
E K +EEE ++
Sbjct: 846 EAAKWAREEEEAQR 859
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
sapiens]
Length = 1299
Score = 34.7 bits (78), Expect = 0.053
Identities = 16/58 (27%), Positives = 34/58 (58%)
Query: 139 MEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
+E + +L+ KA K + R+K +E ++R+E L+ ++EEI++ +EE ++
Sbjct: 723 LEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRR 780
Score = 34.3 bits (77), Expect = 0.070
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 60 RARCRKNTLARRKGRH-MGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRH 118
R R + LARRK + + + A R E+ ++ LRRL R RE + +R
Sbjct: 777 RKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEE--ERR 834
Query: 119 MYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQ 178
L K + K R E +L+ ++ R ++ AR +E RKR+E +Q
Sbjct: 835 KQEELLRKQEEEAAKWAREEEEAQRRLEENRLRM----EEEAARLRHEEEERKRKELEVQ 890
Query: 179 AKKEEIIKTLSKEEETKK 196
+KE + + ++E ++
Sbjct: 891 RQKELMRQRQQQQEALRR 908
Score = 31.6 bits (70), Expect = 0.45
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 144 KLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
KL+ ++ ++ A + E R + +E R+++EE L+ ++EE K +EE ++
Sbjct: 736 KLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEERKRREEEELARR 788
Score = 30.8 bits (68), Expect = 0.77
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRR----LLRRYRESKKIDRHMYHSLYLKV 127
K + + + + A R + +R LRR +LRR +E ++ R L +
Sbjct: 731 KAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEER-KRREEEELARRK 789
Query: 128 KGNVFKNKRILMEHIHKLKADKARKKLLADQAEA-----RRSKTKEARKRREERLQAKKE 182
+ + +R + + + ++ R++ Q EA R + +E R+++EE L+ ++E
Sbjct: 790 QEEALRRQREQEIALRRQREEEERQQ----QEEALRRLEERRREEEERRKQEELLRKQEE 845
Query: 183 EIIKTLSKEEETKK 196
E K +EEE ++
Sbjct: 846 EAAKWAREEEEAQR 859
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 34.7 bits (78), Expect = 0.053
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 144 KLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
K K + KK + E R+ K +E +KR+ +R + K+EE + +EEE +K
Sbjct: 34 KEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEK 86
Score = 31.2 bits (69), Expect = 0.59
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 133 KNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEE 192
K K E K K + K+ ++ E +R + ++ +K EER + ++EE KEE
Sbjct: 32 KRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEE---EEEKEE 88
Query: 193 ETKK 196
E K+
Sbjct: 89 EEKE 92
Score = 30.8 bits (68), Expect = 0.77
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 144 KLKADKARKKLLADQAEARRSKTKEARK--RREERLQAKKEEIIKTLSKEEETKK 196
K + ++ + ++ E + K KE RK R+E+ + K +E K KEEE KK
Sbjct: 7 KKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKK 61
Score = 30.4 bits (67), Expect = 1.0
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 146 KADKARKKLLADQAEA-RRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
K K ++K + E ++ KTKE KR+E+ + KK + + KEEE ++
Sbjct: 25 KEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEERE 76
Score = 30.4 bits (67), Expect = 1.0
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 133 KNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSK 190
+ K+ E + + ++ +K ++ E RR K K+ R+R+EE + KK+ KT K
Sbjct: 66 RKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKKK 123
Score = 30.0 bits (66), Expect = 1.3
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 146 KADKARKKLLADQAEARRSKTKEAR--KRREERLQAKKEEIIKTLSKEEETKK 196
K K +KK + E ++ +E + KR+E+R + +KE+ K +KE E +K
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRK 53
Score = 28.5 bits (62), Expect = 3.8
Identities = 19/87 (21%), Positives = 40/87 (45%)
Query: 110 RESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169
R+ K+ ++ K K + ++ E K K K +++ ++ E + KE
Sbjct: 29 RKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEE 88
Query: 170 RKRREERLQAKKEEIIKTLSKEEETKK 196
++ E R + KK++ + +EE+ KK
Sbjct: 89 EEKEEGRRRKKKKKRRRKEEEEEKKKK 115
>gi|194294521 intersectin 2 isoform 1 [Homo sapiens]
Length = 1697
Score = 34.7 bits (78), Expect = 0.053
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 17/90 (18%)
Query: 123 LYLKVKGNVFKNKRILMEHIHKLKADKAR-----------KKLLADQAEARRSKTKE--- 168
L LK + +++ +E ++K+K DK + KK L D+A + + KE
Sbjct: 645 LLLKELRETYNTQQLALEQLYKIKRDKLKEIERKRLELMQKKKLEDEAARKAKQGKENLW 704
Query: 169 ---ARKRREERLQAKKEEIIKTLSKEEETK 195
RK EE+ + +EE + +EEE K
Sbjct: 705 KENLRKEEEEKQKRLQEEKTQEKIQEEERK 734
>gi|194294525 intersectin 2 isoform 2 [Homo sapiens]
Length = 1249
Score = 34.7 bits (78), Expect = 0.053
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 17/90 (18%)
Query: 123 LYLKVKGNVFKNKRILMEHIHKLKADKAR-----------KKLLADQAEARRSKTKE--- 168
L LK + +++ +E ++K+K DK + KK L D+A + + KE
Sbjct: 645 LLLKELRETYNTQQLALEQLYKIKRDKLKEIERKRLELMQKKKLEDEAARKAKQGKENLW 704
Query: 169 ---ARKRREERLQAKKEEIIKTLSKEEETK 195
RK EE+ + +EE + +EEE K
Sbjct: 705 KENLRKEEEEKQKRLQEEKTQEKIQEEERK 734
>gi|41152097 DNA segment on chromosome X and Y (unique) 155
expressed sequence isoform 1 [Homo sapiens]
Length = 695
Score = 34.3 bits (77), Expect = 0.070
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 127 VKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA--RKRREERLQAKKEEI 184
+K + K + I K + ++ + + L Q E ++ + KEA R+R EER Q + EE+
Sbjct: 253 IKVSFDSTKHLSDASIKKRQLERQKLQELEQQREEQKRREKEAEERQRAEERKQKELEEL 312
Query: 185 IKTLSKEEETKK 196
+ +EE+ +K
Sbjct: 313 ERERKREEKLRK 324
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 34.3 bits (77), Expect = 0.070
Identities = 48/236 (20%), Positives = 94/236 (39%), Gaps = 44/236 (18%)
Query: 1 MSMLRLQKRLASSVLRCGKKKV-------WLDPNETNEIANANSRQQIRKLIKDGLIIRK 53
+S+L+ Q L LR G V L+P N +++DG ++
Sbjct: 221 ISVLQTQVSLLKQRLRNGPMNVDVLKPLPQLEPQAEVFTKEENPESDGEPVVEDGTSVKT 280
Query: 54 PVTVHSRARCRKNTLARRKGRHMG----------------------IGKRKGTANARMPE 91
T+ R + ++N L R K + + + + M E
Sbjct: 281 LETLQQRVKRQENLLKRCKETIQSHKEQCTLLTSEKEALQEQLDERLQELEKIKDLHMAE 340
Query: 92 KVTWMRRMRILRRLLRRYRESK-----KIDRHMYHSLYLKVKGNVFKNKRI--LMEHIHK 144
K + ++R + L+ + + K + R M+ +L +K + RI + +
Sbjct: 341 KTKLITQLRDAKNLIEQLEQDKGMVIAETKRQMHETLEMKEEEIAQLRSRIKQMTTQGEE 400
Query: 145 LKADKARKKLLA----DQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEETKK 196
L+ K + + A ++A + KT+EAR+ +L+A+ +E IKT+ K E ++
Sbjct: 401 LREQKEKSERAAFEELEKALSTAQKTEEARR----KLKAEMDEQIKTIEKTSEEER 452
>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
sapiens]
Length = 2542
Score = 34.3 bits (77), Expect = 0.070
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 133 KNKRILMEHIHKLKA-DKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKE 191
KN IL++ + K+ +++RK+ LA A+R K KE RK+++E + K+EE + KE
Sbjct: 1426 KNASILLKELDLEKSREESRKQALA----AKREKRKEKRKKKKEEQKRKQEEDEENKPKE 1481
Score = 28.5 bits (62), Expect = 3.8
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 163 RSKTKEARKRREERLQAKKEEIIKTLSKEE 192
+ K +E +K REE++Q KK++I+K L K E
Sbjct: 814 KDKIEELKKNREEQVQ-KKKKILKELQKVE 842
>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
Length = 2617
Score = 34.3 bits (77), Expect = 0.070
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Query: 133 KNKRILMEHIHKLKA-DKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKE 191
KN IL++ + K+ +++RK+ LA A+R K KE RK+++E + K+EE + KE
Sbjct: 1426 KNASILLKELDLEKSREESRKQALA----AKREKRKEKRKKKKEEQKRKQEEDEENKPKE 1481
Score = 28.5 bits (62), Expect = 3.8
Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 163 RSKTKEARKRREERLQAKKEEIIKTLSKEE 192
+ K +E +K REE++Q KK++I+K L K E
Sbjct: 814 KDKIEELKKNREEQVQ-KKKKILKELQKVE 842
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 34.3 bits (77), Expect = 0.070
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 133 KNKRILMEHIHKLKADKAR-KKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKE 191
++K + E + L +KA+ K+ AD EA++ + ++ K+REE + +EE +K ++
Sbjct: 308 RDKLLKQEEMKSLAFEKAKLKREKADALEAKKKEKEDKEKKREELKKIVEEERLKKKEEK 367
Query: 192 EETK 195
E K
Sbjct: 368 ERLK 371
Score = 32.0 bits (71), Expect = 0.35
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 14/85 (16%)
Query: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA---------DQAEARRSKTK--EARK 171
+++ + NV NK+ L + + KA K R KLL ++A+ +R K EA+K
Sbjct: 283 IHISQEDNV-ANKQTLASY--RSKATKERDKLLKQEEMKSLAFEKAKLKREKADALEAKK 339
Query: 172 RREERLQAKKEEIIKTLSKEEETKK 196
+ +E + K+EE+ K + +E KK
Sbjct: 340 KEKEDKEKKREELKKIVEEERLKKK 364
Score = 29.3 bits (64), Expect = 2.2
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 140 EHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEET 194
+ +LKA++ RK+ ++A AR K KE + + +E+ +K+E +K + T
Sbjct: 614 QEFRELKAEQHRKE--REEAAARIRKRKEEKLKEQEQKMKEKQEKLKEDEQRNST 666
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 34.3 bits (77), Expect = 0.070
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 133 KNKRILMEHIHKLKADKAR-KKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKE 191
++K + E + L +KA+ K+ AD EA++ + ++ K+REE + +EE +K ++
Sbjct: 308 RDKLLKQEEMKSLAFEKAKLKREKADALEAKKKEKEDKEKKREELKKIVEEERLKKKEEK 367
Query: 192 EETK 195
E K
Sbjct: 368 ERLK 371
Score = 32.0 bits (71), Expect = 0.35
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 14/85 (16%)
Query: 123 LYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA---------DQAEARRSKTK--EARK 171
+++ + NV NK+ L + + KA K R KLL ++A+ +R K EA+K
Sbjct: 283 IHISQEDNV-ANKQTLASY--RSKATKERDKLLKQEEMKSLAFEKAKLKREKADALEAKK 339
Query: 172 RREERLQAKKEEIIKTLSKEEETKK 196
+ +E + K+EE+ K + +E KK
Sbjct: 340 KEKEDKEKKREELKKIVEEERLKKK 364
Score = 29.3 bits (64), Expect = 2.2
Identities = 16/55 (29%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 140 EHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKEEET 194
+ +LKA++ RK+ ++A AR K KE + + +E+ +K+E +K + T
Sbjct: 646 QEFRELKAEQHRKE--REEAAARIRKRKEEKLKEQEQKMKEKQEKLKEDEQRNST 698
>gi|194294523 intersectin 2 isoform 3 [Homo sapiens]
Length = 1670
Score = 34.3 bits (77), Expect = 0.070
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 18/122 (14%)
Query: 91 EKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKA 150
EK +R++ L + SK + +++ LK + +++ +E ++K+K DK
Sbjct: 587 EKEELCQRLKEQLDALEKETASKLSEMDSFNN-QLKELRETYNTQQLALEQLYKIKRDKL 645
Query: 151 R-----------KKLLADQAEARRSKTKE------ARKRREERLQAKKEEIIKTLSKEEE 193
+ KK L D+A + + KE RK EE+ + +EE + +EEE
Sbjct: 646 KEIERKRLELMQKKKLEDEAARKAKQGKENLWKENLRKEEEEKQKRLQEEKTQEKIQEEE 705
Query: 194 TK 195
K
Sbjct: 706 RK 707
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 34.3 bits (77), Expect = 0.070
Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 25/149 (16%)
Query: 52 RKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRE 111
R V + R R +N++ R + R+ + + + +R ++ R R R R+
Sbjct: 586 RARVKIRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDR-------RTNRASRSRSRD 638
Query: 112 SKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK 171
+KID +GN+ N H HK +A + +K ++ + K K+ +
Sbjct: 639 RRKIDDQ---------RGNLSGNS-----HKHKGEAKEQERKKERSRSIDKDRKKKDKER 684
Query: 172 RREE----RLQAKKEEIIKTLSKEEETKK 196
RE+ Q ++E+ K S+++ K+
Sbjct: 685 EREQDKRKEKQKREEKDFKFSSQDDRLKR 713
>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 34.3 bits (77), Expect = 0.070
Identities = 32/149 (21%), Positives = 64/149 (42%), Gaps = 25/149 (16%)
Query: 52 RKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRE 111
R V + R R +N++ R + R+ + + + +R ++ R R R R+
Sbjct: 586 RARVKIRDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDR-------RTNRASRSRSRD 638
Query: 112 SKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK 171
+KID +GN+ N H HK +A + +K ++ + K K+ +
Sbjct: 639 RRKIDDQ---------RGNLSGNS-----HKHKGEAKEQERKKERSRSIDKDRKKKDKER 684
Query: 172 RREE----RLQAKKEEIIKTLSKEEETKK 196
RE+ Q ++E+ K S+++ K+
Sbjct: 685 EREQDKRKEKQKREEKDFKFSSQDDRLKR 713
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 34.3 bits (77), Expect = 0.070
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 133 KNKRILMEHIHKLKADK---ARKKLLADQAEARRSKTKEARKRRE----ERLQAKKEEII 185
+ +R E +L+A++ R++ LA +AEAR + EAR+R E E+ QA++EE
Sbjct: 611 REQREREEQERRLQAERDKRMREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQE 670
Query: 186 KTLSKEEETK 195
+ ++EE +
Sbjct: 671 RLQKQKEEAE 680
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.131 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,413,160
Number of Sequences: 37866
Number of extensions: 257523
Number of successful extensions: 3521
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 2421
Number of HSP's gapped (non-prelim): 919
length of query: 196
length of database: 18,247,518
effective HSP length: 97
effective length of query: 99
effective length of database: 14,574,516
effective search space: 1442877084
effective search space used: 1442877084
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.