Guide to the Human Genome
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Name: PTH Sequence: fasta or formatted (115aa) NCBI GI: 4506267
Description:

parathyroid hormone preproprotein

Referenced in:

Bone and Related Tissues
Additional Brain Proteins
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         10           1
 C cysteine            0.9          1           1
 D aspartate           6.1          7           1
 E glutamate           6.1          7           1
 F phenylalanine       1.7          2           1
 G glycine             4.3          5           1
 H histidine           3.5          4           1
 I isoleucine          3.5          4           1
 K lysine             13.0         15           2
 L leucine            10.4         12           1
 M methionine          5.2          6           1
 N asparagine          4.3          5           1
 P proline             3.5          4           1
 Q glutamine           3.5          4           1
 R arginine            5.2          6           1
 S serine              7.8          9           1
 T threonine           1.7          2           1
 V valine              9.6         11           1
 W tryptophan          0.9          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   parathyroid hormone preproprotein 
PTHLH                 0.040   parathyroid hormone-like hormone isoform 1 prepropro...
PTHLH                 0.040   parathyroid hormone-like hormone isoform 1 prepropro...
PTHLH                 0.040   parathyroid hormone-like hormone isoform 2 prepropro...
PTHLH                 0.040   parathyroid hormone-like hormone isoform 2 preproprot...
ARID4A                0.030   retinoblastoma-binding protein 1 isoform III 
ARID4A                0.030   retinoblastoma-binding protein 1 isoform II 
ARID4A                0.030   retinoblastoma-binding protein 1 isoform I 
KIF5A                 0.020   kinesin family member 5A 
MYH8                  0.020   myosin, heavy chain 8, skeletal muscle, perinatal [...
LOC100293120          0.015   PREDICTED: similar to hCG1818060 
ARID4B                0.015   AT rich interactive domain 4B isoform 2 
ARID4B                0.015   AT rich interactive domain 4B isoform 1 
LOC100287728          0.015   PREDICTED: hypothetical protein XP_002343887 
LOC100291149          0.010   PREDICTED: hypothetical protein XP_002348263 
RASGRP3               0.010   RAS guanyl releasing protein 3 (calcium and DAG-reg...
RASGRP3               0.010   RAS guanyl releasing protein 3 (calcium and DAG-regu...
MYH7B                 0.010   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
LRRC42                0.010   leucine rich repeat containing 42 
PDGFRA                0.010   platelet-derived growth factor receptor alpha precurs...
RNF34                 0.010   ring finger protein 34 isoform 1 
RNF34                 0.010   ring finger protein 34 isoform 2 
C6orf222              0.010   hypothetical protein LOC389384 
PDGFRB                0.010   platelet-derived growth factor receptor beta precurso...
KIAA0802              0.010   hypothetical protein LOC23255 
APC                   0.005   adenomatous polyposis coli 
APC                   0.005   adenomatous polyposis coli 
APC                   0.005   adenomatous polyposis coli 
SEMA6D                0.005   semaphorin 6D isoform 1 precursor 
SEMA6D                0.005   semaphorin 6D isoform 4 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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