LRRC42 6777

Name: LRRC42	Sequence: fasta or formatted (428aa)		NCBI GI: 16506299
Description: leucine rich repeat containing 42		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 26 3 C cysteine 3.0 13 2 D aspartate 5.1 22 2 E glutamate 8.6 37 2 F phenylalanine 4.2 18 1 G glycine 4.9 21 1 H histidine 3.3 14 1 I isoleucine 3.5 15 1 K lysine 8.2 35 2 L leucine 12.4 53 2 M methionine 1.6 7 1 N asparagine 4.0 17 2 P proline 4.2 18 1 Q glutamine 3.5 15 1 R arginine 5.6 24 1 S serine 8.9 38 2 T threonine 4.7 20 1 V valine 4.7 20 1 W tryptophan 0.7 3 1 Y tyrosine 2.8 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine rich repeat containing 42 FBXL13 0.023 F-box and leucine-rich repeat protein 13 isoform 2 ... FBXL13 0.023 F-box and leucine-rich repeat protein 13 isoform 1 ... FBXL14 0.015 F-box and leucine-rich repeat protein 14 RNH1 0.015 ribonuclease/angiogenin inhibitor RNH1 0.015 ribonuclease/angiogenin inhibitor RNH1 0.015 ribonuclease/angiogenin inhibitor RNH1 0.015 ribonuclease/angiogenin inhibitor RNH1 0.015 ribonuclease/angiogenin inhibitor RNH1 0.015 ribonuclease/angiogenin inhibitor RNH1 0.015 ribonuclease/angiogenin inhibitor RNH1 0.015 ribonuclease/angiogenin inhibitor CMIP 0.011 c-Maf-inducing protein isoform C-mip CMIP 0.011 c-Maf-inducing protein isoform Tc-mip CIR1 0.010 CBF1 interacting corepressor ITPKC 0.010 inositol 1,4,5-trisphosphate 3-kinase C TLR8 0.010 toll-like receptor 8 NLRP3 0.010 NLR family, pyrin domain containing 3 isoform c [Ho... TPX2 0.010 TPX2, microtubule-associated protein homolog NLRP3 0.008 NLR family, pyrin domain containing 3 isoform b [Hom... KDM2A 0.008 F-box and leucine-rich repeat protein 11 TSKU 0.008 tsukushin FBXL16 0.008 F-box and leucine-rich repeat protein 16 PPP1R7 0.008 protein phosphatase 1, regulatory subunit 7 SFRS12IP1 0.008 P18SRP protein TRDN 0.007 triadin C22orf36 0.007 hypothetical protein LOC388886 TAF3 0.006 RNA polymerase II transcription factor TAFII140 [Ho... E2F7 0.006 E2F transcription factor 7 HOOK2 0.006 hook homolog 2 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.