Guide to the Human Genome
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Name: KIF5A Sequence: fasta or formatted (1032aa) NCBI GI: 45446749
Description:

kinesin family member 5A

Referenced in:

Kinesins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         67           2
 C cysteine            1.5         15           2
 D aspartate           5.2         54           2
 E glutamate          11.4        118           3
 F phenylalanine       2.1         22           1
 G glycine             4.4         45           2
 H histidine           2.5         26           2
 I isoleucine          4.7         48           2
 K lysine              8.8         91           3
 L leucine            10.1        104           2
 M methionine          1.9         20           1
 N asparagine          4.7         49           2
 P proline             2.7         28           2
 Q glutamine           6.3         65           2
 R arginine            5.3         55           2
 S serine              7.9         82           2
 T threonine           4.9         51           2
 V valine              5.8         60           2
 W tryptophan          0.2          2           1
 Y tyrosine            2.9         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinesin family member 5A 
KIF5C                 0.698   kinesin family member 5C 
KIF5B                 0.655   kinesin family member 5B 
KIF3A                 0.138   kinesin family member 3A 
KIF3B                 0.136   kinesin family member 3B 
KIF27                 0.129   kinesin family member 27 
CENPE                 0.128   centromere protein E 
KIF4A                 0.128   kinesin family member 4 
KIF4B                 0.126   kinesin family member 4B 
KIF21B                0.123   kinesin family member 21B 
KIF11                 0.123   kinesin family member 11 
KIF15                 0.122   kinesin family member 15 
KIF17                 0.120   kinesin family member 17 isoform b 
KIF17                 0.120   kinesin family member 17 isoform a 
KIF21A                0.117   kinesin family member 21A 
KIF16B                0.116   kinesin-like motor protein C20orf23 
KIF1B                 0.111   kinesin family member 1B isoform alpha 
KIF3C                 0.110   kinesin family member 3C 
KIF7                  0.107   kinesin family member 7 
KIF1B                 0.107   kinesin family member 1B isoform b 
KIF13A                0.106   kinesin family member 13A isoform d 
KIF13A                0.106   kinesin family member 13A isoform c 
KIF13A                0.106   kinesin family member 13A isoform b 
KIF13A                0.106   kinesin family member 13A isoform a 
KIF1A                 0.105   axonal transport of synaptic vesicles 
KIF6                  0.100   kinesin family member 6 
KIF1C                 0.099   kinesin family member 1C 
KIF13B                0.098   kinesin family member 13B 
KIF18A                0.097   kinesin family member 18A 
KIF19                 0.097   kinesin family member 19 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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