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Search of human proteins with 4506123
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506123 PRP18 pre-mRNA processing factor 18 homolog [Homo
sapiens]
(342 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506123 PRP18 pre-mRNA processing factor 18 homolog [Homo sap... 680 0.0
gi|45439327 periplakin [Homo sapiens] 38 0.015
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 36 0.044
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 36 0.044
gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens] 35 0.097
gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Hom... 35 0.097
gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Hom... 35 0.097
gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Hom... 35 0.097
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 35 0.13
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 35 0.13
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 35 0.13
gi|148746195 trichohyalin [Homo sapiens] 34 0.17
gi|42516576 glutaredoxin 5 [Homo sapiens] 34 0.17
gi|31542634 filamin A interacting protein 1 [Homo sapiens] 34 0.22
gi|93102364 SWAP-70 protein [Homo sapiens] 33 0.28
gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens] 33 0.28
gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens] 33 0.28
gi|29648315 small G protein signaling modulator 3 [Homo sapiens] 33 0.28
gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo sa... 33 0.28
gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo sap... 33 0.28
gi|153791492 eukaryotic translation initiation factor 3, subunit... 33 0.48
gi|83700233 eukaryotic translation initiation factor 3, subunit ... 33 0.48
gi|4503525 eukaryotic translation initiation factor 3, subunit C... 33 0.48
gi|21361183 paired-like homeodomain transcription factor 2 isofo... 32 0.63
gi|32698866 spindle pole body component 24 homolog [Homo sapiens] 32 0.63
gi|24234711 paired-like homeodomain transcription factor 2 isofo... 32 0.82
gi|24234708 paired-like homeodomain transcription factor 2 isofo... 32 0.82
gi|126362971 serine/threonine kinase 10 [Homo sapiens] 32 0.82
gi|33359215 ALS2 C-terminal like isoform 1 [Homo sapiens] 32 0.82
gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens] 32 0.82
>gi|4506123 PRP18 pre-mRNA processing factor 18 homolog [Homo
sapiens]
Length = 342
Score = 680 bits (1755), Expect = 0.0
Identities = 342/342 (100%), Positives = 342/342 (100%)
Query: 1 MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLT 60
MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLT
Sbjct: 1 MDILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLT 60
Query: 61 SSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVN 120
SSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVN
Sbjct: 61 SSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVN 120
Query: 121 KGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD 180
KGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD
Sbjct: 121 KGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD 180
Query: 181 DHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR 240
DHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR
Sbjct: 181 DHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRKR 240
Query: 241 NLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSK 300
NLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSK
Sbjct: 241 NLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFSK 300
Query: 301 HVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
HVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL
Sbjct: 301 HVAHVLNDETQRKYIQGLKRLMTICQKHFPTDPSKCVEYNAL 342
>gi|45439327 periplakin [Homo sapiens]
Length = 1756
Score = 37.7 bits (86), Expect = 0.015
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 28/212 (13%)
Query: 7 EILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVL 66
E L+K ++N++ K +S+LA+ +E E +Q + +K L VL
Sbjct: 32 EQLQKNADQVEKNIVDTEAKM--QSDLARLQEGRQPEHRDVTLQKVLDSEKLLY----VL 85
Query: 67 ELELA---EEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGL 123
E + A K P E IR+L+ER +R + RL E+ P+VN
Sbjct: 86 EADAAIAKHMKHPQGDMIAEDIRQLKERVTNLR----GKHKQIYRLAVKEV-DPQVNWAA 140
Query: 124 RNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGK-GDDH 182
+ K LDK++ Q G + D +V E N E++A+G L K GD
Sbjct: 141 LVEEK--LDKLNNQSF---------GTDLPLVDHQVEEHNIFHNEVKAIGPHLAKDGDKE 189
Query: 183 KDMDIITKFLKFLLGVWAKE--LNAREDYVKR 212
++ ++ K+ K L A++ L++ +DY++R
Sbjct: 190 QNSELRAKYQKLLAASQARQQHLSSLQDYMQR 221
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 36.2 bits (82), Expect = 0.044
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 24 NKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQ--KPLTSSNPVLELELAEEKLPMTLSR 81
N+K K +E +EA FER +Q KE DQ K L N + E+AE++L +
Sbjct: 1693 NEKAIKLNETLGTRDEA-FERNLEGLQ-KEIDQMIKELRRKNLETQKEIAEDELVAAEAL 1750
Query: 82 QEVIRRL--RERGEPIRLFGE-----TDY-----DAFQRLRKIEILTPEVNKGLRNDLKA 129
+ +++L RGE + + DY DA+ LR+ E N+
Sbjct: 1751 LKKVKKLFGESRGENEEMEKDLREKLADYKNKVDDAWDLLREATDKIREANRLF------ 1804
Query: 130 ALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIIT 189
A+++ + L + E G+ +N LK E N ++E L + + D+ + DI T
Sbjct: 1805 AVNQKNMTALEKKKEAVESGKRQIENTLK--EGNDILDEANRLADEINSIIDYVE-DIQT 1861
Query: 190 KFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPL 233
K L ++ELN + D + + ++ + + Q ES+ L
Sbjct: 1862 K-----LPPMSEELNDKIDDLSQEIKDRKLAEKVSQAESHAAQL 1900
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 36.2 bits (82), Expect = 0.044
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 30/224 (13%)
Query: 24 NKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQ--KPLTSSNPVLELELAEEKLPMTLSR 81
N+K K +E +EA FER +Q KE DQ K L N + E+AE++L +
Sbjct: 1693 NEKAIKLNETLGTRDEA-FERNLEGLQ-KEIDQMIKELRRKNLETQKEIAEDELVAAEAL 1750
Query: 82 QEVIRRL--RERGEPIRLFGE-----TDY-----DAFQRLRKIEILTPEVNKGLRNDLKA 129
+ +++L RGE + + DY DA+ LR+ E N+
Sbjct: 1751 LKKVKKLFGESRGENEEMEKDLREKLADYKNKVDDAWDLLREATDKIREANRLF------ 1804
Query: 130 ALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIIT 189
A+++ + L + E G+ +N LK E N ++E L + + D+ + DI T
Sbjct: 1805 AVNQKNMTALEKKKEAVESGKRQIENTLK--EGNDILDEANRLADEINSIIDYVE-DIQT 1861
Query: 190 KFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPL 233
K L ++ELN + D + + ++ + + Q ES+ L
Sbjct: 1862 K-----LPPMSEELNDKIDDLSQEIKDRKLAEKVSQAESHAAQL 1900
>gi|4885399 structural maintenance of chromosomes 3 [Homo sapiens]
Length = 1217
Score = 35.0 bits (79), Expect = 0.097
Identities = 60/284 (21%), Positives = 111/284 (39%), Gaps = 41/284 (14%)
Query: 10 RKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLELE 69
++R+ R+ ++ K K +++ E F +Q E + S+ L+ E
Sbjct: 724 QQRKFKASRDSILSEMKMLKEK---RQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE 780
Query: 70 LAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKA 129
L + L + +R+ + IR + + K+E + V L +L+
Sbjct: 781 LGTDLLSQLSLEDQ--KRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRK 838
Query: 130 ALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLG------------ 177
LD+++Q+ LNE+ E G T ++ N +++ A E L
Sbjct: 839 RLDQVEQE-LNEL-RETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKE 896
Query: 178 --------KGDDHKDMDII---TKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQT 226
K + + MD I TK L+ + L +E+ +K+ +L S Q+
Sbjct: 897 LQKSMERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKI--RELGSLPQEAF 954
Query: 227 ESY----LRPLFRKLRKRNLPAD-----IKESITDIIKFMLQRE 261
E Y L+ LFRKL + N K+++ + F Q+E
Sbjct: 955 EKYQTLSLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKE 998
>gi|75677576 dyslexia susceptibility 1 candidate 1 isoform c [Homo
sapiens]
Length = 381
Score = 35.0 bits (79), Expect = 0.097
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 19/151 (12%)
Query: 102 DYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHE 161
D + QR+R+ IL + + KAA + DQ+Y ++ E E D+K +E
Sbjct: 92 DKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKKIEDMKENE 151
Query: 162 ENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSA 221
+ LEA E K ++ K + K + KE +E+ K K S
Sbjct: 152 RIKATKALEAWKEYQRKAEEQKKIQREEKLCQ-------KEKQIKEERKKI----KYKSL 200
Query: 222 TQKQTESYLRPLFR--------KLRKRNLPA 244
T+ L P R KL++ ++PA
Sbjct: 201 TRNLASRNLAPKGRNSENIFTEKLKEDSIPA 231
>gi|75677567 dyslexia susceptibility 1 candidate 1 isoform b [Homo
sapiens]
Length = 376
Score = 35.0 bits (79), Expect = 0.097
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 19/151 (12%)
Query: 102 DYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHE 161
D + QR+R+ IL + + KAA + DQ+Y ++ E E D+K +E
Sbjct: 92 DKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKKIEDMKENE 151
Query: 162 ENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSA 221
+ LEA E K ++ K + K + KE +E+ K K S
Sbjct: 152 RIKATKALEAWKEYQRKAEEQKKIQREEKLCQ-------KEKQIKEERKKI----KYKSL 200
Query: 222 TQKQTESYLRPLFR--------KLRKRNLPA 244
T+ L P R KL++ ++PA
Sbjct: 201 TRNLASRNLAPKGRNSENIFTEKLKEDSIPA 231
>gi|75677570 dyslexia susceptibility 1 candidate 1 isoform a [Homo
sapiens]
Length = 420
Score = 35.0 bits (79), Expect = 0.097
Identities = 38/151 (25%), Positives = 61/151 (40%), Gaps = 19/151 (12%)
Query: 102 DYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHE 161
D + QR+R+ IL + + KAA + DQ+Y ++ E E D+K +E
Sbjct: 92 DKEMMQRIREKSILQAQERAKEATEAKAAAKREDQKYALSVMMKIEEEERKKIEDMKENE 151
Query: 162 ENTTIEELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSA 221
+ LEA E K ++ K + K + KE +E+ K K S
Sbjct: 152 RIKATKALEAWKEYQRKAEEQKKIQREEKLCQ-------KEKQIKEERKKI----KYKSL 200
Query: 222 TQKQTESYLRPLFR--------KLRKRNLPA 244
T+ L P R KL++ ++PA
Sbjct: 201 TRNLASRNLAPKGRNSENIFTEKLKEDSIPA 231
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 34.7 bits (78), Expect = 0.13
Identities = 51/227 (22%), Positives = 107/227 (47%), Gaps = 38/227 (16%)
Query: 16 EDRNLLVENKKYFKRSELAKKEEEAYF--ERCGYKIQP-KEEDQKPLTSSNPVLELELAE 72
E++ ++E K SELA ++ + E+ ++Q KE+ QK ++ N + +
Sbjct: 395 EEQGCVIEKLK----SELAGLNKQFCYTVEQHNREVQSLKEQHQKEISELNETFLSDSEK 450
Query: 73 EKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKI-EILTPEVNKGLRNDLKAAL 131
EKL + I+ L+E+ E ++ + ++ LR+I EIL E+ + +
Sbjct: 451 EKLTLMFE----IQGLKEQCENLQQEKQEAILNYESLREIMEILQTELGESA-GKISQEF 505
Query: 132 DKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGK--GDDHK------ 183
+ + QQ +++ + Q L+ T E +AL E++ + G++ K
Sbjct: 506 ESMKQQQASDV--------HELQQKLR-----TAFTEKDALLETVNRLQGENEKLLSQQE 552
Query: 184 ---DMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTE 227
+++ K L+ GV+ L+ R+ +K ++GK+NS T+++ +
Sbjct: 553 LVPELENTIKNLQEKNGVYLLSLSQRDTMLKE-LEGKINSLTEEKDD 598
Score = 29.6 bits (65), Expect = 4.1
Identities = 36/175 (20%), Positives = 82/175 (46%), Gaps = 14/175 (8%)
Query: 4 LKSEILRKRQLVEDRNLL-VENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSS 62
L+ +++ + L ED+ +L E K ++ + E++ + KE+ +
Sbjct: 666 LEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLSQKED----VILK 721
Query: 63 NPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKG 122
+ +LE +KL + + Q+ + +L E + +LF +T F + E+ K
Sbjct: 722 EHITQLE---KKLQLMVEEQDNLNKLLENEQVQKLFVKTQLYGFLKEMGSEVSEDSEEKD 778
Query: 123 LRNDLKA---ALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTI--EELEAL 172
+ N L+A +L KI+++ N + ++ + + ++K +E + + EEL++L
Sbjct: 779 VVNVLQAVGESLAKINEEKCN-LAFQRDEKVLELEKEIKCLQEESVVQCEELKSL 832
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 34.7 bits (78), Expect = 0.13
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 5 KSEILRKRQLVEDRNLLVENKKYFKRSELAKKE------EEAYFERCGYKIQPKEEDQKP 58
++EI+R L +D +L +N K R E+ +KE E+ + K+ + E K
Sbjct: 398 ENEIMRLSSLNQDNSLAEDNLKLKMRIEVLEKEKSLLSQEKEELQMSLLKLNNEYEVIKS 457
Query: 59 LTSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPE 118
+ + L+ EL + +L + QE+ + + E+ I E D + + + ++ +
Sbjct: 458 TATRDISLDSELHDLRLNLEAKEQELNQSISEKETLIAEIEELDRQNQEATKHMILIKDQ 517
Query: 119 VNKGLRNDLKAALDKIDQQYLNE--IVGGQEPGEEDTQNDLKVHEENTTIEEL 169
++K +N+ + + K+ Q +E V E + D +L V +E E+
Sbjct: 518 LSK-QQNEGDSIISKLKQDLNDEKKRVHQLEDDKMDITKELDVQKEKLIQSEV 569
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 34.7 bits (78), Expect = 0.13
Identities = 57/284 (20%), Positives = 122/284 (42%), Gaps = 39/284 (13%)
Query: 2 DILKSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTS 61
+I++ +I ++ + ++ R+ +ENK +E K EEE E+ ++Q K ++++
Sbjct: 645 EIVQLQIRKQEESLKRRSFHIENKLKDLLAEKEKFEEERLREQQEIELQKKRQEEETF-- 702
Query: 62 SNPVLELELAEEKLPMTLSRQEVIRRLR-----ERGEPIRLFGETDY---DAFQRLRKIE 113
L QE ++RL+ E+ E ++F E D + ++ K+E
Sbjct: 703 -----------------LRVQEELQRLKELNNNEKAEKFQIFQELDQLQKEKDEQYAKLE 745
Query: 114 ILTPEVNKGLRND--LKAALD---KIDQQYLNEIVGGQEPGEEDTQNDLK-VHEENTTIE 167
+ + + + L A L+ + Q+ + + G+ E+ + DL+ + E ++
Sbjct: 746 LEKKRLEEQEKEQVMLVAHLEEQLREKQEMIQLLRRGEVQWVEEEKRDLEGIRESLLRVK 805
Query: 168 ELEALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTE 227
E A G+ G+ + + +F +F K +N +D V++ + L Q++ E
Sbjct: 806 EARAGGDEDGEELEKAQL----RFFEFKRRQLVKLVNLEKDLVQQ--KDILKKEVQEEQE 859
Query: 228 SYLRPLFRKLRKRNLPADIKESITDIIKFMLQREYVKANDAYLQ 271
++ L ES+TD+ + E +K + LQ
Sbjct: 860 ILECLKCEHDKESRLLEKHDESVTDVTEVPQDFEKIKPVEYRLQ 903
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 34.3 bits (77), Expect = 0.17
Identities = 45/230 (19%), Positives = 97/230 (42%), Gaps = 14/230 (6%)
Query: 5 KSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYF-----ERCGYKIQPKEEDQKPL 59
+ + LR++Q E R E ++ +R E ++ E ER +++ ++E+++
Sbjct: 302 REQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEER-- 359
Query: 60 TSSNPVLELELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEV 119
L E EE+ L R++ +RR ++ +L E Q+LR+ + L E
Sbjct: 360 --REQQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQ 417
Query: 120 NKGLRNDLKAAL--DKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLG 177
L+ ++ +Q++ E + E++ + D EE T E E + L
Sbjct: 418 QLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLK 477
Query: 178 KGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTE 227
+ + + + ++LK ++ RE ++R + + ++Q E
Sbjct: 478 RDQEEERRE---RWLKLEEEERREQQERREQQLRREQEERREQRLKRQEE 524
Score = 32.3 bits (72), Expect = 0.63
Identities = 36/167 (21%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 10 RKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLELE 69
R +QL E+ + L E++ E + +E+ ++ ++++ + + ++ + P L+ +
Sbjct: 845 RAQQLQEEEDGLQEDQ------ERRRSQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQ 898
Query: 70 LAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIE--ILTPEVNKGLRNDL 127
L +E+ + +E+ R RE+ R E Y ++L++ E +L E K R +
Sbjct: 899 LRKEQQLLQEEEEELQREEREKRR--RQEQERQYREEEQLQQEEEQLLREEREKRRRQER 956
Query: 128 KAAL--DKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEAL 172
+ DK QQ +++G + + + K EE +E E L
Sbjct: 957 ERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQL 1003
Score = 30.4 bits (67), Expect = 2.4
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 7 EILRKRQLVEDRNLLVENKKYFKRSELAK--KEEEAYFERCGYKIQPKEEDQKPLTSSNP 64
E LR+R+L+E R E K+ +R + +EEE R + KEE++ L P
Sbjct: 208 EQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEK--LQEEEP 265
Query: 65 VLELELAEEKLPMTLSRQEVIRRLRERGE 93
+ EL EE+ + ++ +RR R+ E
Sbjct: 266 QRQRELQEEEEQLRKLERQELRRERQEEE 294
Score = 30.4 bits (67), Expect = 2.4
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 17/174 (9%)
Query: 5 KSEILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNP 64
+ E R+++L ++ +E + KR E+ + E+E E+ + +P+EE ++ L
Sbjct: 581 REEERRQQRLKREQEERLEQR--LKREEVERLEQEERREQRLKREEPEEERRQQL----- 633
Query: 65 VLELELAEEKLPMTLSRQEVIR---RLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNK 121
L+ E EE+ L R++ R RL+ E RL + + R+ E L E +
Sbjct: 634 -LKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQE-LAEEEQE 691
Query: 122 GLRNDLKAALDKIDQQYLNEIVGGQ-----EPGEEDTQNDLKVHEENTTIEELE 170
R +K+ + K Q +E Q P +++ Q + EE E E
Sbjct: 692 QARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESE 745
Score = 28.9 bits (63), Expect = 7.0
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 29 KRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRL 88
+R + ++E+E ER +++ +EE+++ +L +E+ L ++E +RL
Sbjct: 502 RREQQLRREQE---ERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRL 558
Query: 89 RERGEPIRLFGETDYDAFQRL-----RKIEILTPEVNKGLRNDLK-AALDKIDQQYLNE- 141
+ RL E + Q L R+ + L E + L LK +++++Q+ E
Sbjct: 559 EQERREQRLKREQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQ 618
Query: 142 IVGGQEPGEEDTQNDLKVHEE 162
+ +EP EE Q LK E+
Sbjct: 619 RLKREEPEEERRQQLLKSEEQ 639
>gi|42516576 glutaredoxin 5 [Homo sapiens]
Length = 157
Score = 34.3 bits (77), Expect = 0.17
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 95 IRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLN-EIVGGQEPGEEDT 153
+RL G DY A+ L PE+ +G+++ + I Q YLN E VGG +
Sbjct: 77 LRLHGVRDYAAYNVLDD-----PELRQGIKD--YSNWPTIPQVYLNGEFVGGCDIL---- 125
Query: 154 QNDLKVHEENTTIEELEALGESLGKGDDHKDMD 186
L++H+ +EEL+ LG D+ KD D
Sbjct: 126 ---LQMHQNGDLVEELKKLGIHSALLDEKKDQD 155
>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
Length = 1213
Score = 33.9 bits (76), Expect = 0.22
Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 19 NLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVL---ELELAEEKL 75
NLL + ++ K+ +K +A E+ K K D+ S ++ E ++ E+L
Sbjct: 202 NLLEQERERLKKLLEQEKAYQARKEKENAKRLNKLRDELVKLKSFALMLVDERQMHIEQL 261
Query: 76 PMTLSR-QEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKI 134
+ + Q++ ++LRE E ++ + Q+L K+E+ D + +
Sbjct: 262 GLQSQKVQDLTQKLREEEEKLKAITSKSKEDRQKLLKLEV-----------DFEHKASRF 310
Query: 135 DQQY--LNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMDIITKFL 192
Q++ +N + QE + Q LK+ IEELE ++L K ++ ++ K
Sbjct: 311 SQEHEEMNAKLANQE--SHNRQLRLKLVGLTQRIEELEETNKNLQKAEEEL-QELRDKIA 367
Query: 193 KFLLG---VWAKELNAREDYVKRSVQGKLNSATQKQTESYLRPLFRKLRK 239
K G + A+ N R+ ++ ++GK T +TES R L +KL++
Sbjct: 368 KGECGNSSLMAEVENLRKRVLE--MEGKDEEIT--KTESQCRELRKKLQE 413
>gi|93102364 SWAP-70 protein [Homo sapiens]
Length = 585
Score = 33.5 bits (75), Expect = 0.28
Identities = 26/125 (20%), Positives = 58/125 (46%), Gaps = 7/125 (5%)
Query: 9 LRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLEL 68
LRK+QL E L + K+ +E ++E EA ++ E++K + L+
Sbjct: 326 LRKKQLAEQEELERQMKELQAANESKQQELEAVRKKLEEAASRAAEEEKKRLQTQVELQA 385
Query: 69 ELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLK 128
+ E L RQ++ ++ ++ + + QR+R++E + ++ + L ++ +
Sbjct: 386 RFSTELEREKLIRQQMEEQVAQKSSELEQY-------LQRVRELEDMYLKLQEALEDERQ 438
Query: 129 AALDK 133
A D+
Sbjct: 439 ARQDE 443
>gi|134948605 ankyrin repeat domain 12 isoform 2 [Homo sapiens]
Length = 2039
Score = 33.5 bits (75), Expect = 0.28
Identities = 52/250 (20%), Positives = 110/250 (44%), Gaps = 27/250 (10%)
Query: 10 RKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLE-- 67
+++ + ++RN E K K SE + +EE+ + + P ++D + + +E
Sbjct: 714 KEKHVSKERNFKEERDKIKKESEKSFREEKIKDLKEERENIPTDKDSEFTSLGMSAIEES 773
Query: 68 --LELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRN 125
L L E+++ + +++ I+ +E+ E E D + K+E T E K +++
Sbjct: 774 IGLHLVEKEIDIE-KQEKHIKESKEKPEKRSQIKEKD------IEKMERKTFEKEKKIKH 826
Query: 126 DLKAALDKIDQQYLNEIVGG-QEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKD 184
+ K+ DK+D L+E V +E + + + K H+E + A+ ++ + +
Sbjct: 827 EHKSEKDKLD---LSECVDKIKEKDKLYSHHTEKCHKEGEKSKNTAAIKKTDDREKSREK 883
Query: 185 MDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTES--YLRPLFRKLRKRNL 242
MD KE +E ++ S + L KQ+++ Y + K ++++
Sbjct: 884 MD----------RKHDKEKPEKERHLAESKEKHLMEKKNKQSDNSEYSKSEKGKNKEKDR 933
Query: 243 PADIKESITD 252
D KE D
Sbjct: 934 ELDKKEKSRD 943
>gi|134948558 ankyrin repeat domain 12 isoform 1 [Homo sapiens]
Length = 2062
Score = 33.5 bits (75), Expect = 0.28
Identities = 52/250 (20%), Positives = 110/250 (44%), Gaps = 27/250 (10%)
Query: 10 RKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLE-- 67
+++ + ++RN E K K SE + +EE+ + + P ++D + + +E
Sbjct: 737 KEKHVSKERNFKEERDKIKKESEKSFREEKIKDLKEERENIPTDKDSEFTSLGMSAIEES 796
Query: 68 --LELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRN 125
L L E+++ + +++ I+ +E+ E E D + K+E T E K +++
Sbjct: 797 IGLHLVEKEIDIE-KQEKHIKESKEKPEKRSQIKEKD------IEKMERKTFEKEKKIKH 849
Query: 126 DLKAALDKIDQQYLNEIVGG-QEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKD 184
+ K+ DK+D L+E V +E + + + K H+E + A+ ++ + +
Sbjct: 850 EHKSEKDKLD---LSECVDKIKEKDKLYSHHTEKCHKEGEKSKNTAAIKKTDDREKSREK 906
Query: 185 MDIITKFLKFLLGVWAKELNAREDYVKRSVQGKLNSATQKQTES--YLRPLFRKLRKRNL 242
MD KE +E ++ S + L KQ+++ Y + K ++++
Sbjct: 907 MD----------RKHDKEKPEKERHLAESKEKHLMEKKNKQSDNSEYSKSEKGKNKEKDR 956
Query: 243 PADIKESITD 252
D KE D
Sbjct: 957 ELDKKEKSRD 966
>gi|29648315 small G protein signaling modulator 3 [Homo sapiens]
Length = 749
Score = 33.5 bits (75), Expect = 0.28
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 36/144 (25%)
Query: 26 KYFKRSELAKKEEEAYFERCGYKIQPKEEDQ--KPLTSSNPVLE---------------- 67
KY ++ E A+ + E Y++ G+++ +E D+ L +++P++E
Sbjct: 27 KYTQKEESAE-QPEFYYDEFGFRVYKEEGDEPGSSLLANSPLMEDAPQRLRWQAHLEFTH 85
Query: 68 ----LELAEEKLPMTLSRQEVIRRLRERGEP--------IRLFGETDYDAFQRLRKIEIL 115
+L +K+ ++L R E +R L G P +RL G A Q+ R E+
Sbjct: 86 NHDVGDLTWDKIAVSLPRSEKLRSLVLAGIPHGMRPQLWMRLSG-----ALQKKRNSELS 140
Query: 116 TPEVNKGLRNDLKAALDKIDQQYL 139
E+ K ND A +I++ L
Sbjct: 141 YREIVKNSSNDETIAAKQIEKDLL 164
>gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo
sapiens]
Length = 1185
Score = 33.5 bits (75), Expect = 0.28
Identities = 40/197 (20%), Positives = 89/197 (45%), Gaps = 19/197 (9%)
Query: 7 EILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVL 66
E + +++ +E+R +E K+Y A + ++ +I K+ + N L
Sbjct: 310 EAMAQKEDMEERITTLE-KRYLAAQREATSVHDLN-DKLENEIANKDSMHRQTEDKNRQL 367
Query: 67 E--LELAEEKLPMTLSRQEVI----RRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVN 120
+ LELAE+KL TL + E + L +R + E + +RLR++E E N
Sbjct: 368 QERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQMEAQLEEKN 427
Query: 121 KGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVH---------EENTTIEELEA 171
+ L+ + +K+++++ + + ++ L++H ++N+ + E+E+
Sbjct: 428 QELQRARQR--EKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLREVES 485
Query: 172 LGESLGKGDDHKDMDII 188
+ L + KD ++
Sbjct: 486 AKKQLEETQHDKDQLVL 502
>gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo
sapiens]
Length = 1202
Score = 33.5 bits (75), Expect = 0.28
Identities = 40/197 (20%), Positives = 89/197 (45%), Gaps = 19/197 (9%)
Query: 7 EILRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVL 66
E + +++ +E+R +E K+Y A + ++ +I K+ + N L
Sbjct: 310 EAMAQKEDMEERITTLE-KRYLAAQREATSVHDLN-DKLENEIANKDSMHRQTEDKNRQL 367
Query: 67 E--LELAEEKLPMTLSRQEVI----RRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVN 120
+ LELAE+KL TL + E + L +R + E + +RLR++E E N
Sbjct: 368 QERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQMEAQLEEKN 427
Query: 121 KGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVH---------EENTTIEELEA 171
+ L+ + +K+++++ + + ++ L++H ++N+ + E+E+
Sbjct: 428 QELQRARQR--EKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLREVES 485
Query: 172 LGESLGKGDDHKDMDII 188
+ L + KD ++
Sbjct: 486 AKKQLEETQHDKDQLVL 502
>gi|153791492 eukaryotic translation initiation factor 3, subunit
C-like [Homo sapiens]
Length = 914
Score = 32.7 bits (73), Expect = 0.48
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 18/142 (12%)
Query: 111 KIEILTPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELE 170
K +L E + + +++A DK ++ N I +N +K+ + +EE E
Sbjct: 33 KQPLLLSEDEEDTKRVVRSAKDKRFEELTNLI--------RTIRNAMKIRDVTKCLEEFE 84
Query: 171 ALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKL-NSATQKQTESY 229
LG++ GK D + + +F + + L EDY+ + K K
Sbjct: 85 LLGKAYGKAKSIVDKEGVPRF-------YIRILADLEDYLNELWEDKEGKKKMNKNNAKA 137
Query: 230 LRPLFRKLRKRNLPADIKESIT 251
L L +K+RK N D + IT
Sbjct: 138 LSTLRQKIRKYN--RDFESHIT 157
>gi|83700233 eukaryotic translation initiation factor 3, subunit C
[Homo sapiens]
Length = 913
Score = 32.7 bits (73), Expect = 0.48
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 18/142 (12%)
Query: 111 KIEILTPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELE 170
K +L E + + +++A DK ++ N I +N +K+ + +EE E
Sbjct: 33 KQPLLLSEDEEDTKRVVRSAKDKRFEELTNLI--------RTIRNAMKIRDVTKCLEEFE 84
Query: 171 ALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKL-NSATQKQTESY 229
LG++ GK D + + +F + + L EDY+ + K K
Sbjct: 85 LLGKAYGKAKSIVDKEGVPRF-------YIRILADLEDYLNELWEDKEGKKKMNKNNAKA 137
Query: 230 LRPLFRKLRKRNLPADIKESIT 251
L L +K+RK N D + IT
Sbjct: 138 LSTLRQKIRKYN--RDFESHIT 157
>gi|4503525 eukaryotic translation initiation factor 3, subunit C
[Homo sapiens]
Length = 913
Score = 32.7 bits (73), Expect = 0.48
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 18/142 (12%)
Query: 111 KIEILTPEVNKGLRNDLKAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELE 170
K +L E + + +++A DK ++ N I +N +K+ + +EE E
Sbjct: 33 KQPLLLSEDEEDTKRVVRSAKDKRFEELTNLI--------RTIRNAMKIRDVTKCLEEFE 84
Query: 171 ALGESLGKGDDHKDMDIITKFLKFLLGVWAKELNAREDYVKRSVQGKL-NSATQKQTESY 229
LG++ GK D + + +F + + L EDY+ + K K
Sbjct: 85 LLGKAYGKAKSIVDKEGVPRF-------YIRILADLEDYLNELWEDKEGKKKMNKNNAKA 137
Query: 230 LRPLFRKLRKRNLPADIKESIT 251
L L +K+RK N D + IT
Sbjct: 138 LSTLRQKIRKYN--RDFESHIT 157
>gi|21361183 paired-like homeodomain transcription factor 2 isoform
c [Homo sapiens]
Length = 324
Score = 32.3 bits (72), Expect = 0.63
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 128 KAALDKIDQQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD--DHKDM 185
+AA QQ NE VG ++P ++ Q + H + ++ELEA + D +++
Sbjct: 66 EAAEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEI 125
Query: 186 DIITKFLKFLLGVWAKELNAREDYVKRSVQGKL 218
+ T + + VW K A+ +R+ Q +L
Sbjct: 126 AVWTNLTEARVRVWFKNRRAKWRKRERNQQAEL 158
>gi|32698866 spindle pole body component 24 homolog [Homo sapiens]
Length = 197
Score = 32.3 bits (72), Expect = 0.63
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 86 RRLRERGEPI--RLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQ--YLNE 141
RRL R E + RL ET A ++LR+I + EV + L N A +++ Q L +
Sbjct: 28 RRLLGRHEQVVERLL-ETQDGAEKQLREILTMEKEVAQSLLN----AKEQVHQGGVELQQ 82
Query: 142 IVGG-QEPGEEDTQNDLKVHEENTTIEELEALGESLGKGDDHKDMD 186
+ G QE GEEDT+ + + +EEL+ + L + + D D
Sbjct: 83 LEAGLQEAGEEDTRLKASLLQLTRELEELKEIEADLERQEKEVDED 128
>gi|24234711 paired-like homeodomain transcription factor 2 isoform
a [Homo sapiens]
Length = 271
Score = 32.0 bits (71), Expect = 0.82
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 136 QQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD--DHKDMDIITKFLK 193
QQ NE VG ++P ++ Q + H + ++ELEA + D +++ + T +
Sbjct: 21 QQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTE 80
Query: 194 FLLGVWAKELNAREDYVKRSVQGKL 218
+ VW K A+ +R+ Q +L
Sbjct: 81 ARVRVWFKNRRAKWRKRERNQQAEL 105
>gi|24234708 paired-like homeodomain transcription factor 2 isoform
b [Homo sapiens]
Length = 317
Score = 32.0 bits (71), Expect = 0.82
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 136 QQYLNEIVGGQEPGEEDTQNDLKVHEENTTIEELEALGESLGKGD--DHKDMDIITKFLK 193
QQ NE VG ++P ++ Q + H + ++ELEA + D +++ + T +
Sbjct: 67 QQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTE 126
Query: 194 FLLGVWAKELNAREDYVKRSVQGKL 218
+ VW K A+ +R+ Q +L
Sbjct: 127 ARVRVWFKNRRAKWRKRERNQQAEL 151
>gi|126362971 serine/threonine kinase 10 [Homo sapiens]
Length = 968
Score = 32.0 bits (71), Expect = 0.82
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 9 LRKRQLVEDRNLLVENKKYFKRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLEL 68
LR+++L E R L++ +++ +++L+ K E + +K +E + K + L
Sbjct: 561 LRRQELRELR--LLQKEEHRNQTQLSNKHELQLEQM--HKRFEQEINAKKKFFDTELENL 616
Query: 69 ELAEEKLPMTLSRQEVIRRLRERGEPIRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLK 128
E +++ + + +RR RE IRL + DY FQ K+ ++ ++K
Sbjct: 617 ERQQKQQVEKMEQDHAVRR-REEARRIRLEQDRDYTRFQEQLKL----------MKKEVK 665
Query: 129 AALDKIDQQYLNEIVGGQEPGEEDTQ 154
++K+ +Q E + ++ EE TQ
Sbjct: 666 NEVEKLPRQQRKESM--KQKMEEHTQ 689
>gi|33359215 ALS2 C-terminal like isoform 1 [Homo sapiens]
Length = 953
Score = 32.0 bits (71), Expect = 0.82
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 239 KRNLPADIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIG-------VTMVGIHAR 291
+R P D S+ DI++ +LQ KA YL+ A+ N+ P+G +T +A
Sbjct: 643 ERTHPEDSVGSMEDILEELLQHREPKALQLYLRKALSNSLHPLGKLLRTLMLTFQATYAG 702
Query: 292 TGREKIFSKHVAHVLNDETQR 312
G +KH+ + +E ++
Sbjct: 703 VGA----NKHLQELAQEEVKQ 719
>gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]
Length = 898
Score = 32.0 bits (71), Expect = 0.82
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 29 KRSELAKKEEEAYFERCGYKIQPKEEDQKPLTSSNPVLELELAEEKLPMTLSRQEVIRRL 88
K+ E A++E+EA K E++ L LE +L + + + ++ +
Sbjct: 299 KKCEEARQEKEAMV----MKYVRGEKESLDLRKEKETLEKKLRDANKELEKNTNKIKQLS 354
Query: 89 RERGEPIRLFGETDYDAFQRLRKIEILTPEVN------KGLRNDLKAALD--KIDQQYLN 140
+E+G +L+ + + + +R+I+ L ++N K +N LKA +D K + L
Sbjct: 355 QEKGRLHQLYETKEGETTRLIREIDKLKEDINSHVIKVKWAQNKLKAEMDSHKETKDKLK 414
Query: 141 EIVGGQEPGEEDT-------QNDLKVHEENTTIEELEALGE-SLGKGDDHKDM 185
E +E+ Q+ +K ++E+ I+ E + + KG+ K M
Sbjct: 415 ETTTKLTQAKEEADQIRKNCQDMIKTYQESEEIKSNELDAKLRVTKGELEKQM 467
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,493,852
Number of Sequences: 37866
Number of extensions: 565978
Number of successful extensions: 2256
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 2207
Number of HSP's gapped (non-prelim): 115
length of query: 342
length of database: 18,247,518
effective HSP length: 103
effective length of query: 239
effective length of database: 14,347,320
effective search space: 3429009480
effective search space used: 3429009480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.