Guide to the Human Genome
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Name: SPC24 Sequence: fasta or formatted (197aa) NCBI GI: 32698866
Description:

spindle pole body component 24 homolog

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         15           2
 C cysteine            0.5          1           1
 D aspartate           5.1         10           1
 E glutamate          14.7         29           2
 F phenylalanine       1.0          2           1
 G glycine             5.6         11           2
 H histidine           3.0          6           2
 I isoleucine          4.1          8           1
 K lysine              4.6          9           1
 L leucine            13.7         27           2
 M methionine          1.5          3           1
 N asparagine          1.0          2           1
 P proline             2.0          4           1
 Q glutamine           9.1         18           2
 R arginine            5.6         11           2
 S serine              5.6         11           1
 T threonine           4.6          9           2
 V valine              7.1         14           2
 W tryptophan          1.5          3           1
 Y tyrosine            2.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   spindle pole body component 24 homolog 
MYH14                 0.072   myosin, heavy chain 14 isoform 1 
MYH14                 0.072   myosin, heavy chain 14 isoform 2 
MYH14                 0.072   myosin, heavy chain 14 isoform 3 
MYH11                 0.066   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.066   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.066   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.066   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
PLEC1                 0.064   plectin 1 isoform 11 
PLEC1                 0.064   plectin 1 isoform 10 
PLEC1                 0.064   plectin 1 isoform 8 
PLEC1                 0.064   plectin 1 isoform 7 
PLEC1                 0.064   plectin 1 isoform 6 
PLEC1                 0.064   plectin 1 isoform 3 
PLEC1                 0.064   plectin 1 isoform 2 
PLEC1                 0.064   plectin 1 isoform 1 
MYH10                 0.061   myosin, heavy polypeptide 10, non-muscle 
CCDC157               0.055   coiled-coil domain containing 157 
FILIP1                0.053   filamin A interacting protein 1 
MYH9                  0.050   myosin, heavy polypeptide 9, non-muscle 
CGN                   0.050   cingulin 
RALBP1                0.047   ralA binding protein 1 
CGNL1                 0.047   cingulin-like 1 
GOLGB1                0.047   golgi autoantigen, golgin subfamily b, macrogolgin ...
CEP290                0.042   centrosomal protein 290kDa 
TCHH                  0.042   trichohyalin 
HMMR                  0.042   hyaluronan-mediated motility receptor isoform d [Ho...
HMMR                  0.042   hyaluronan-mediated motility receptor isoform a [Ho...
HMMR                  0.042   hyaluronan-mediated motility receptor isoform c [Ho...
HMMR                  0.042   hyaluronan-mediated motility receptor isoform b [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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