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Search of human proteins with 4506015
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506015 protein phosphatase 1 regulatory inhibitor subunit 8
isoform gamma [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13699256 protein phosphatase 1 regulatory inhibitor subunit 8... 265 5e-72
gi|20336239 protein phosphatase 1 regulatory inhibitor subunit 8... 265 5e-72
gi|4506015 protein phosphatase 1 regulatory inhibitor subunit 8 ... 265 5e-72
gi|55743112 NAD kinase [Homo sapiens] 33 0.077
gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo ... 32 0.13
gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens] 32 0.13
gi|18079216 CASK interacting protein 1 [Homo sapiens] 31 0.22
gi|169217315 PREDICTED: hypothetical protein [Homo sapiens] 31 0.29
gi|113430659 PREDICTED: hypothetical protein [Homo sapiens] 31 0.29
gi|113430177 PREDICTED: hypothetical protein [Homo sapiens] 31 0.29
gi|113430175 PREDICTED: hypothetical protein [Homo sapiens] 31 0.29
gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens] 31 0.29
gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens] 31 0.29
gi|24308382 leukocyte receptor cluster member 8 [Homo sapiens] 31 0.29
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor... 30 0.38
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor... 30 0.38
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 30 0.38
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 30 0.38
gi|47132519 Ras association and pleckstrin homology domains 1 is... 30 0.38
gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] 30 0.38
gi|53759129 proline rich 13 isoform 2 [Homo sapiens] 30 0.50
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 30 0.65
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 30 0.65
gi|6912582 penta-EF-hand domain containing 1 [Homo sapiens] 30 0.65
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 29 0.85
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 29 0.85
gi|110349719 titin isoform N2-A [Homo sapiens] 29 1.1
gi|110349717 titin isoform novex-2 [Homo sapiens] 29 1.1
gi|110349713 titin isoform novex-1 [Homo sapiens] 29 1.1
gi|110349715 titin isoform N2-B [Homo sapiens] 29 1.1
>gi|13699256 protein phosphatase 1 regulatory inhibitor subunit 8
isoform alpha [Homo sapiens]
Length = 351
Score = 265 bits (678), Expect = 5e-72
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT 60
MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT
Sbjct: 225 MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT 284
Query: 61 ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK 120
ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK
Sbjct: 285 ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK 344
Query: 121 PTPSLLI 127
PTPSLLI
Sbjct: 345 PTPSLLI 351
>gi|20336239 protein phosphatase 1 regulatory inhibitor subunit 8
isoform beta/delta [Homo sapiens]
Length = 209
Score = 265 bits (678), Expect = 5e-72
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT 60
MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT
Sbjct: 83 MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT 142
Query: 61 ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK 120
ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK
Sbjct: 143 ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK 202
Query: 121 PTPSLLI 127
PTPSLLI
Sbjct: 203 PTPSLLI 209
>gi|4506015 protein phosphatase 1 regulatory inhibitor subunit 8
isoform gamma [Homo sapiens]
Length = 127
Score = 265 bits (678), Expect = 5e-72
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT 60
MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT
Sbjct: 1 MVQTAVVPVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGT 60
Query: 61 ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK 120
ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK
Sbjct: 61 ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKEAWPGKK 120
Query: 121 PTPSLLI 127
PTPSLLI
Sbjct: 121 PTPSLLI 127
>gi|55743112 NAD kinase [Homo sapiens]
Length = 446
Score = 32.7 bits (73), Expect = 0.077
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 52 SQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKY 111
S P G A G M +PN+ P + +TP+ P +++ P PA + + P+ +
Sbjct: 319 STPTGSTAYAAAAGASMIHPNV-PAIMITPICPHSLSFRPIVVPAGVELKIMLSPEARNT 377
Query: 112 AKEAWPGKK 120
A ++ G+K
Sbjct: 378 AWVSFDGRK 386
>gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo
sapiens]
Length = 159
Score = 32.0 bits (71), Expect = 0.13
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 9/95 (9%)
Query: 13 RVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGI--HGTALIGGL---- 66
R GPG+L L GS R+ + +G P S GS G+ HG A L
Sbjct: 44 RAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTS--GSPEEGVSGHGPAAAASLPRAQ 101
Query: 67 -PMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNP 100
P P P+ A L +P ++ A +PA P
Sbjct: 102 VPTPPPSHAQPQPLQRTLPPPTSLPAALDPAPSRP 136
>gi|7706621 T-cell leukemia homeobox 2 [Homo sapiens]
Length = 284
Score = 32.0 bits (71), Expect = 0.13
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Query: 18 GSLGLEESGSRRMQNFAFSGGLY--------GGLPPTHSEAGSQPHGIHGTALIGGLPMP 69
G LGL G +N AFSGG + G L P +G P G+ LP+P
Sbjct: 33 GGLGLGRGGQGHGENGAFSGGYHGASGYGPAGSLAPLPGSSGVGPGGVIRVPAHRPLPVP 92
Query: 70 YP 71
P
Sbjct: 93 PP 94
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 31.2 bits (69), Expect = 0.22
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 58 HGTAL-IGGLPMPYPNLAPDVDLTPVVPS-AVNMNPAPNPAVYNPEAVNEPKKKKYAKEA 115
HGT + P P P V +PS + +PAP+PA P A+ +P + A
Sbjct: 1264 HGTPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGA 1323
Query: 116 WPGKKPTP 123
P K P+P
Sbjct: 1324 SPAKPPSP 1331
>gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 30.8 bits (68), Expect = 0.29
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 8 PVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 59
P + V PG+LG +S R G L+G P H + S P +HG
Sbjct: 1112 PALRAIVPTPGTLG-RDSSPGRTSIIPSPGALHGDRSPAHLDIASTPGALHG 1162
Score = 26.2 bits (56), Expect = 7.2
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 17 PGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 59
PG LG S + + + G L+G P H+ S P +HG
Sbjct: 1322 PGDLGGGSSSAHKAITPS-PGALHGDRSPAHTAIASTPGALHG 1363
Score = 25.8 bits (55), Expect = 9.4
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 10 KKKRVEGPGSLGLEESGSRRMQNFAFS-GGLYGGLPPTHSEAGSQPHGIHG 59
+K+RV P L GS A + G L+G P H+ P +HG
Sbjct: 965 QKRRVVAPTPEALHGDGSWTYMAIAPTPGALHGDSSPAHTSIIPSPGALHG 1015
>gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 30.8 bits (68), Expect = 0.29
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 8 PVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 59
P + V PG+LG +S R G L+G P H + S P +HG
Sbjct: 1112 PALRAIVPTPGTLG-RDSSPGRTSIIPSPGALHGDRSPAHLDIASTPGALHG 1162
Score = 26.2 bits (56), Expect = 7.2
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 17 PGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 59
PG LG S + + + G L+G P H+ S P +HG
Sbjct: 1322 PGDLGGGSSSAHKAITPS-PGALHGDRSPAHTAIASTPGALHG 1363
Score = 25.8 bits (55), Expect = 9.4
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 10 KKKRVEGPGSLGLEESGSRRMQNFAFS-GGLYGGLPPTHSEAGSQPHGIHG 59
+K+RV P L GS A + G L+G P H+ P +HG
Sbjct: 965 QKRRVVAPTPEALHGDGSWTYMAIAPTPGALHGDSSPAHTSIIPSPGALHG 1015
>gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2028
Score = 30.8 bits (68), Expect = 0.29
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 8 PVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 59
P + V PG+LG +S R G L+G P H + S P +HG
Sbjct: 1080 PALRAIVPTPGTLG-RDSSPGRTSIIPSPGALHGDRSPAHLDIASTPGALHG 1130
Score = 25.8 bits (55), Expect = 9.4
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 10 KKKRVEGPGSLGLEESGSRRMQNFAFS-GGLYGGLPPTHSEAGSQPHGIHG 59
+K+RV P L GS A + G L+G P H+ P +HG
Sbjct: 933 QKRRVVAPTPEALHGDGSWTYMAIAPTPGALHGDSSPAHTSIIPSPGALHG 983
Score = 25.8 bits (55), Expect = 9.4
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 17 PGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 59
PG LG S S G L+G P H+ S P +HG
Sbjct: 1290 PGDLG-GGSSSAHKAIAPSPGALHGDRSPAHTAIASTPGALHG 1331
>gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1934
Score = 30.8 bits (68), Expect = 0.29
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 8 PVKKKRVEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 59
P + V PG+LG +S R G L+G P H + S P +HG
Sbjct: 986 PALRAIVPTPGTLG-RDSSPGRTSIIPSPGALHGDRSPAHLDIASTPGALHG 1036
Score = 25.8 bits (55), Expect = 9.4
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 10 KKKRVEGPGSLGLEESGSRRMQNFAFS-GGLYGGLPPTHSEAGSQPHGIHG 59
+K+RV P L GS A + G L+G P H+ P +HG
Sbjct: 839 QKRRVVAPTPEALHGDGSWTYMAIAPTPGALHGDSSPAHTSIIPSPGALHG 889
Score = 25.8 bits (55), Expect = 9.4
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 17 PGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHG 59
PG LG S S G L+G P H+ S P +HG
Sbjct: 1196 PGDLG-GGSSSAHKAIAPSPGALHGDRSPAHTAIASTPGALHG 1237
>gi|156546910 BRAF35/HDAC2 complex isoform b [Homo sapiens]
Length = 634
Score = 30.8 bits (68), Expect = 0.29
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 69 PYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEP 106
P PN P V PV + + + PAP P + P+ + P
Sbjct: 227 PRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRP 264
>gi|156546894 BRAF35/HDAC2 complex isoform a [Homo sapiens]
Length = 680
Score = 30.8 bits (68), Expect = 0.29
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 69 PYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEP 106
P PN P V PV + + + PAP P + P+ + P
Sbjct: 226 PRPNFLPQVRPKPVAQNNIPIAPAPPPMLAAPQLIQRP 263
>gi|24308382 leukocyte receptor cluster member 8 [Homo sapiens]
Length = 800
Score = 30.8 bits (68), Expect = 0.29
Identities = 21/75 (28%), Positives = 27/75 (36%), Gaps = 13/75 (17%)
Query: 49 EAGSQPHGIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKK 108
+ + PHG H L G P P AP + P+ Y P EP K
Sbjct: 168 QPSNPPHGAH--TLNSG---PQPGTAPATQHSQAGPATGQ--------AYGPHTYTEPAK 214
Query: 109 KKYAKEAWPGKKPTP 123
K ++ W KP P
Sbjct: 215 PKKGQQLWNRMKPAP 229
>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
delta [Homo sapiens]
Length = 831
Score = 30.4 bits (67), Expect = 0.38
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 30/88 (34%)
Query: 67 PMPYPNLAPDVDLT------------PVVPSAVNMNPAPNPAVY--NPEAVNEPKKKKYA 112
P P+P +AP L P VP A ++P P PA + P++V P +
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Query: 113 KEAWP----------------GKKPTPS 124
E P GK P PS
Sbjct: 472 IELLPLGYSEPAFGPCFSMPRGKPPAPS 499
>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
gamma [Homo sapiens]
Length = 850
Score = 30.4 bits (67), Expect = 0.38
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 30/88 (34%)
Query: 67 PMPYPNLAPDVDLT------------PVVPSAVNMNPAPNPAVY--NPEAVNEPKKKKYA 112
P P+P +AP L P VP A ++P P PA + P++V P +
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Query: 113 KEAWP----------------GKKPTPS 124
E P GK P PS
Sbjct: 472 IELLPLGYSEPAFGPCFSMPRGKPPAPS 499
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 30.4 bits (67), Expect = 0.38
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 30/88 (34%)
Query: 67 PMPYPNLAPDVDLT------------PVVPSAVNMNPAPNPAVY--NPEAVNEPKKKKYA 112
P P+P +AP L P VP A ++P P PA + P++V P +
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Query: 113 KEAWP----------------GKKPTPS 124
E P GK P PS
Sbjct: 472 IELLPLGYSEPAFGPCFSMPRGKPPAPS 499
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 30.4 bits (67), Expect = 0.38
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 30/88 (34%)
Query: 67 PMPYPNLAPDVDLT------------PVVPSAVNMNPAPNPAVY--NPEAVNEPKKKKYA 112
P P+P +AP L P VP A ++P P PA + P++V P +
Sbjct: 412 PPPFPPMAPPTALLQEEPLFSPRFPFPTVPPAPGVSPLPAPAAFPPTPQSVPSPAPTPFP 471
Query: 113 KEAWP----------------GKKPTPS 124
E P GK P PS
Sbjct: 472 IELLPLGYSEPAFGPCFSMPRGKPPAPS 499
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 30.4 bits (67), Expect = 0.38
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 66 LPMPYPNLAP-----DVDLTPVVPSAVNMNPAPNP--AVYNPEAVNEPKKKKYAKEAWPG 118
+P+P P+ P + P PS V P P P A P+ P KK + G
Sbjct: 909 IPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGG 968
Query: 119 KKPTPS 124
KKP P+
Sbjct: 969 KKPPPT 974
>gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]
Length = 895
Score = 30.4 bits (67), Expect = 0.38
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 14/108 (12%)
Query: 21 GLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGTALIGGLPMPYPNLA------ 74
G E R+Q++ G+ P E G + +A + G+PMP P L
Sbjct: 45 GNREELVERLQSYTRQTGIVLNRPVLRGEDGDKAAPPPMSAQLPGIPMPPPPLGLPPLQP 104
Query: 75 --------PDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKKYAKE 114
P + L + N+ P P V P A++E ++ K A++
Sbjct: 105 PPPPPPPPPGLGLGFPMAHPPNLGPPPPLRVGEPVALSEEERLKLAQQ 152
>gi|53759129 proline rich 13 isoform 2 [Homo sapiens]
Length = 98
Score = 30.0 bits (66), Expect = 0.50
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Query: 50 AGSQPH-----GIHGTALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVN 104
AG PH G G +G P PYP AP + PV P A M PAV + +
Sbjct: 6 AGGPPHPVPQPGYPGCQPLGPYPPPYPPPAPGI--PPVNPLAPGM---VGPAVIVDKKMQ 60
Query: 105 EPKKKKYAK 113
+ KK + K
Sbjct: 61 KKMKKAHKK 69
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 29.6 bits (65), Expect = 0.65
Identities = 30/97 (30%), Positives = 36/97 (37%), Gaps = 13/97 (13%)
Query: 14 VEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGTALIGGLPMPYPNL 73
VEGPG L +RR A + G GGL + S +P P P P
Sbjct: 620 VEGPGG-ALYARVARREARPARARGEIGGLSLSPSPERRKP------------PPPDPAT 666
Query: 74 APDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKK 110
P V SA AP+P EA P K+K
Sbjct: 667 KPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRK 703
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 29.6 bits (65), Expect = 0.65
Identities = 30/97 (30%), Positives = 36/97 (37%), Gaps = 13/97 (13%)
Query: 14 VEGPGSLGLEESGSRRMQNFAFSGGLYGGLPPTHSEAGSQPHGIHGTALIGGLPMPYPNL 73
VEGPG L +RR A + G GGL + S +P P P P
Sbjct: 615 VEGPGG-ALYARVARREARPARARGEIGGLSLSPSPERRKP------------PPPDPAT 661
Query: 74 APDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKKKK 110
P V SA AP+P EA P K+K
Sbjct: 662 KPKVSWIHGKHSAAAAGRAPSPPPPGSEAAPSPSKRK 698
>gi|6912582 penta-EF-hand domain containing 1 [Homo sapiens]
Length = 284
Score = 29.6 bits (65), Expect = 0.65
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 36 SGGLYG-GLPPTHSEAGSQPHGIHGTALIGGLPMPYPN 72
SGG YG GLPP G P G +G GG P +PN
Sbjct: 32 SGGQYGSGLPPGGGYGGPAPGGPYGPP-AGGGPYGHPN 68
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 29.3 bits (64), Expect = 0.85
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 18/81 (22%)
Query: 39 LYGGLPPTHSEAGSQPHGIHGTALIGGLPMPY----------PNLAPDVDLTPVVPSAVN 88
L+ +PP + PH G P P+ LAPDV L P +
Sbjct: 1074 LFSDIPPRYPFQALPPHY--------GRPYPFLLQPTAAADADGLAPDVPLPADGPERLA 1125
Query: 89 MNPAPNPAVYNPEAVNEPKKK 109
++P P +P + EP ++
Sbjct: 1126 LSPEDKPIRLSPSKITEPLRE 1146
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 29.3 bits (64), Expect = 0.85
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 43 LPPTHSEAGSQPHGIHGT-ALIGGLPMPYPNLAPDVDLTPVVPSAVNMNPAPNP 95
LPP +GS P + ++ G P P + L P P+ V ++PAP P
Sbjct: 1072 LPPLQPNSGSLPQVLPSPLGVLSGTSRPP---TPTLSLKPTPPAPVRLSPAPPP 1122
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 28.9 bits (63), Expect = 1.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
Query: 82 VVPSAVNMNP---APNPAVYNPEAVNEPKKKKYAKEAWP------GKKPTPS 124
V AV P +P P V +PEAV PK+ K + + P KPTP+
Sbjct: 32655 VTEKAVTSPPRVKSPEPRVKSPEAVKSPKRVKSPEPSHPKAVSPTETKPTPT 32706
Score = 27.7 bits (60), Expect = 2.5
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Query: 66 LPMPYPNLAPDVDLTPVVPSAVNMNPAPNPA-----VYNPEAVNEPKKKKYAKEAWPGK- 119
LP P P P+ ++ + P V P P A V +A + K++ AK P K
Sbjct: 11016 LPAPEPKPKPEAEVKTIKPPPVEPEPTPIAAPVTVPVVGKKAEAKAPKEEAAKPKGPIKG 11075
Query: 120 --KPTPS 124
K TPS
Sbjct: 11076 VPKKTPS 11082
Score = 26.2 bits (56), Expect = 7.2
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
Query: 73 LAPDVDLTPVVPSAVNMNPAPNPAVYNPEAVNEPKK----KKY----AKEAWPGKKPTPS 124
+AP+ ++ P V + P V P EPKK KK EA P K+P P
Sbjct: 10810 IAPEEEIAPEEEKPVPVAEEEEPEVPPPAVPEEPKKIIPEKKVPVIKKPEAPPPKEPEPE 10869
Query: 125 LLI 127
+I
Sbjct: 10870 KVI 10872
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 28.9 bits (63), Expect = 1.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
Query: 82 VVPSAVNMNP---APNPAVYNPEAVNEPKKKKYAKEAWP------GKKPTPS 124
V AV P +P P V +PEAV PK+ K + + P KPTP+
Sbjct: 26350 VTEKAVTSPPRVKSPEPRVKSPEAVKSPKRVKSPEPSHPKAVSPTETKPTPT 26401
Score = 27.7 bits (60), Expect = 2.5
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Query: 66 LPMPYPNLAPDVDLTPVVPSAVNMNPAPNPA-----VYNPEAVNEPKKKKYAKEAWPGK- 119
LP P P P+ ++ + P V P P A V +A + K++ AK P K
Sbjct: 4711 LPAPEPKPKPEAEVKTIKPPPVEPEPTPIAAPVTVPVVGKKAEAKAPKEEAAKPKGPIKG 4770
Query: 120 --KPTPS 124
K TPS
Sbjct: 4771 VPKKTPS 4777
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 28.9 bits (63), Expect = 1.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
Query: 82 VVPSAVNMNP---APNPAVYNPEAVNEPKKKKYAKEAWP------GKKPTPS 124
V AV P +P P V +PEAV PK+ K + + P KPTP+
Sbjct: 26283 VTEKAVTSPPRVKSPEPRVKSPEAVKSPKRVKSPEPSHPKAVSPTETKPTPT 26334
Score = 27.7 bits (60), Expect = 2.5
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Query: 66 LPMPYPNLAPDVDLTPVVPSAVNMNPAPNPA-----VYNPEAVNEPKKKKYAKEAWPGK- 119
LP P P P+ ++ + P V P P A V +A + K++ AK P K
Sbjct: 4644 LPAPEPKPKPEAEVKTIKPPPVEPEPTPIAAPVTVPVVGKKAEAKAPKEEAAKPKGPIKG 4703
Query: 120 --KPTPS 124
K TPS
Sbjct: 4704 VPKKTPS 4710
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 28.9 bits (63), Expect = 1.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 9/52 (17%)
Query: 82 VVPSAVNMNP---APNPAVYNPEAVNEPKKKKYAKEAWP------GKKPTPS 124
V AV P +P P V +PEAV PK+ K + + P KPTP+
Sbjct: 26158 VTEKAVTSPPRVKSPEPRVKSPEAVKSPKRVKSPEPSHPKAVSPTETKPTPT 26209
Score = 27.7 bits (60), Expect = 2.5
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Query: 66 LPMPYPNLAPDVDLTPVVPSAVNMNPAPNPA-----VYNPEAVNEPKKKKYAKEAWPGK- 119
LP P P P+ ++ + P V P P A V +A + K++ AK P K
Sbjct: 4519 LPAPEPKPKPEAEVKTIKPPPVEPEPTPIAAPVTVPVVGKKAEAKAPKEEAAKPKGPIKG 4578
Query: 120 --KPTPS 124
K TPS
Sbjct: 4579 VPKKTPS 4585
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,849,101
Number of Sequences: 37866
Number of extensions: 408207
Number of successful extensions: 1231
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 1130
Number of HSP's gapped (non-prelim): 187
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.