Guide to the Human Genome
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Name: MNAT1 Sequence: fasta or formatted (309aa) NCBI GI: 4505225
Description:

menage a trois 1 (CAK assembly factor)

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         13           2
 C cysteine            2.6          8           1
 D aspartate           4.9         15           2
 E glutamate          11.3         35           2
 F phenylalanine       3.6         11           1
 G glycine             4.2         13           2
 H histidine           2.3          7           1
 I isoleucine          3.6         11           1
 K lysine              8.7         27           3
 L leucine            12.6         39           3
 M methionine          1.9          6           1
 N asparagine          4.9         15           2
 P proline             5.2         16           1
 Q glutamine           6.8         21           2
 R arginine            5.5         17           2
 S serine              4.5         14           2
 T threonine           4.2         13           2
 V valine              5.8         18           1
 W tryptophan          0.3          1           1
 Y tyrosine            2.9          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   menage a trois 1 (CAK assembly factor) 
TRIM22                0.033   tripartite motif-containing 22 
MSN                   0.033   moesin 
TMF1                  0.033   TATA element modulatory factor 1 
LOC642446             0.032   PREDICTED: tripartite motif-containing protein 64B-...
CROCC                 0.030   ciliary rootlet coiled-coil 
MAP7D2                0.030   MAP7 domain containing 2 
AKAP9                 0.028   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.028   A-kinase anchor protein 9 isoform 3 
ITSN2                 0.028   intersectin 2 isoform 3 
ITSN2                 0.028   intersectin 2 isoform 1 
ITSN2                 0.028   intersectin 2 isoform 2 
TRIM60                0.027   ring finger protein 129 
CCDC46                0.027   coiled-coil domain containing 46 isoform a 
PIBF1                 0.027   progesterone-induced blocking factor 1 
TRIM10                0.027   tripartite motif-containing 10 isoform 1 
TRIM10                0.027   tripartite motif-containing 10 isoform 2 
MYH15                 0.027   myosin, heavy polypeptide 15 
SWAP70                0.025   SWAP-70 protein 
TCHH                  0.025   trichohyalin 
WDR87                 0.025   NYD-SP11 protein 
ZNF853                0.023   zinc finger protein 853 
LOC283767             0.023   golgi autoantigen, golgin subfamily a-like 
MYO6                  0.023   myosin VI 
MAP9                  0.023   aster-associated protein 
CCDC68                0.023   coiled-coil domain containing 68 
CCDC68                0.023   coiled-coil domain containing 68 
CLIP1                 0.023   restin isoform b 
CLIP1                 0.023   restin isoform a 
ROCK1                 0.023   Rho-associated, coiled-coil containing protein kinase...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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