Guide to the Human Genome
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Name: MAP9 Sequence: fasta or formatted (647aa) NCBI GI: 88759339
Description:

aster-associated protein

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         48           2
 C cysteine            0.5          3           1
 D aspartate           6.3         41           3
 E glutamate          13.6         88           3
 F phenylalanine       3.1         20           2
 G glycine             1.7         11           1
 H histidine           1.5         10           1
 I isoleucine          4.2         27           1
 K lysine             15.3         99           3
 L leucine             6.6         43           2
 M methionine          1.7         11           1
 N asparagine          5.4         35           2
 P proline             3.6         23           2
 Q glutamine           2.9         19           1
 R arginine            4.8         31           2
 S serine             11.1         72           3
 T threonine           5.3         34           3
 V valine              2.8         18           2
 W tryptophan          0.9          6           1
 Y tyrosine            1.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aster-associated protein 
CCDC34                0.051   coiled-coil domain containing 34 isoform 1 
LOC100133599          0.048   PREDICTED: hypothetical protein 
INCENP                0.047   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.046   inner centromere protein antigens 135/155kDa isofor...
LOC283685             0.044   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CALD1                 0.044   caldesmon 1 isoform 1 
LOC283685             0.042   PREDICTED: golgi autoantigen, golgin subfamily a-li...
RBM25                 0.041   RNA binding motif protein 25 
LOC100133599          0.040   PREDICTED: hypothetical protein 
TCHH                  0.040   trichohyalin 
ANKRD12               0.040   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.040   ankyrin repeat domain 12 isoform 1 
ANKRD11               0.040   ankyrin repeat domain 11 
LOC727832             0.039   golgi autoantigen, golgin subfamily a-like 
LOC440243             0.039   PREDICTED: Putative golgin subfamily A member 6-lik...
NEFH                  0.037   neurofilament, heavy polypeptide 200kDa 
EIF5B                 0.037   eukaryotic translation initiation factor 5B 
CCDC41                0.037   NY-REN-58 antigen 
CCDC41                0.037   NY-REN-58 antigen 
LOC283767             0.036   golgi autoantigen, golgin subfamily a-like 
PPIG                  0.036   peptidylprolyl isomerase G 
LOC645202             0.035   PREDICTED: hypothetical protein LOC645202 
BAT2D1                0.035   HBxAg transactivated protein 2 
LOC100132816          0.035   PREDICTED: similar to Putative golgin subfamily A m...
BOD1L                 0.035   biorientation of chromosomes in cell division 1-like...
GOLGA4                0.035   golgi autoantigen, golgin subfamily a, 4 
MAP1A                 0.034   microtubule-associated protein 1A 
LOC400352             0.034   PREDICTED: similar to Putative golgin subfamily A m...
WDR87                 0.034   NYD-SP11 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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