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Search of human proteins with 130980072
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|130980072 CD33 antigen isoform 2 precursor [Homo sapiens]
(237 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|130980072 CD33 antigen isoform 2 precursor [Homo sapiens] 489 e-139
gi|130979981 CD33 antigen isoform 1 precursor [Homo sapiens] 466 e-131
gi|193794821 sialic acid binding Ig-like lectin 6 isoform 1 prec... 176 1e-44
gi|193794817 sialic acid binding Ig-like lectin 6 isoform 3 prec... 176 1e-44
gi|193794819 sialic acid binding Ig-like lectin 6 isoform 2 prec... 164 8e-41
gi|23943856 sialic acid binding Ig-like lectin 9 [Homo sapiens] 153 1e-37
gi|7657570 sialic acid binding Ig-like lectin 7 isoform 1 [Homo ... 152 2e-37
gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens] 149 2e-36
gi|16506826 sialic acid binding immunoglobulin-like lectin-like ... 149 2e-36
gi|16506828 sialic acid binding immunoglobulin-like lectin-like ... 149 2e-36
gi|148762980 sialic acid binding Ig-like lectin 14 [Homo sapiens] 116 2e-26
gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens] 108 5e-24
gi|31377639 sialic acid binding Ig-like lectin 10 [Homo sapiens] 105 4e-23
gi|205830473 sialic acid binding Ig-like lectin 11 isoform 2 [Ho... 96 2e-20
gi|205830470 sialic acid binding Ig-like lectin 11 isoform 1 [Ho... 96 2e-20
gi|118197279 sialic acid binding Ig-like lectin 7 isoform 2 [Hom... 71 7e-13
gi|4758822 nephrin precursor [Homo sapiens] 44 1e-04
gi|157168355 CD22 molecule [Homo sapiens] 43 2e-04
gi|226958551 Fc receptor-like 1 isoform 3 precursor [Homo sapiens] 37 0.019
gi|16418419 Fc receptor-like 1 isoform 1 precursor [Homo sapiens] 37 0.019
gi|11225258 myelin associated glycoprotein isoform a precursor [... 35 0.057
gi|18104957 myelin associated glycoprotein isoform b precursor [... 35 0.057
gi|13489095 sialoadhesin precursor [Homo sapiens] 34 0.097
gi|209413732 poliovirus receptor isoform delta [Homo sapiens] 33 0.16
gi|209413730 poliovirus receptor isoform gamma [Homo sapiens] 33 0.16
gi|209413728 poliovirus receptor isoform beta [Homo sapiens] 33 0.16
gi|209413726 poliovirus receptor isoform alpha [Homo sapiens] 33 0.16
gi|126362957 leukocyte immunoglobulin-like receptor, subfamily B... 32 0.48
gi|116488411 leukocyte immunoglobulin-like receptor, subfamily B... 32 0.48
gi|113206030 mucin 1 isoform 8 precursor [Homo sapiens] 32 0.63
>gi|130980072 CD33 antigen isoform 2 precursor [Homo sapiens]
Length = 237
Score = 489 bits (1260), Expect = e-139
Identities = 237/237 (100%), Positives = 237/237 (100%)
Query: 1 MPLLLLLPLLWADLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSL 60
MPLLLLLPLLWADLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSL
Sbjct: 1 MPLLLLLPLLWADLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSL 60
Query: 61 GPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDG 120
GPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDG
Sbjct: 61 GPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDG 120
Query: 121 SGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSAS 180
SGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSAS
Sbjct: 121 SGKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSAS 180
Query: 181 PKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ 237
PKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ
Sbjct: 181 PKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ 237
>gi|130979981 CD33 antigen isoform 1 precursor [Homo sapiens]
Length = 364
Score = 466 bits (1198), Expect = e-131
Identities = 225/225 (100%), Positives = 225/225 (100%)
Query: 13 DLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLII 72
DLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLII
Sbjct: 140 DLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLII 199
Query: 73 TPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVH 132
TPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVH
Sbjct: 200 TPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVH 259
Query: 133 GAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGP 192
GAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGP
Sbjct: 260 GAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGP 319
Query: 193 TETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ 237
TETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ
Sbjct: 320 TETSSCSGAAPTVEMDEELHYASLNFHGMNPSKDTSTEYSEVRTQ 364
Score = 28.5 bits (62), Expect = 5.3
Identities = 12/12 (100%), Positives = 12/12 (100%)
Query: 1 MPLLLLLPLLWA 12
MPLLLLLPLLWA
Sbjct: 1 MPLLLLLPLLWA 12
>gi|193794821 sialic acid binding Ig-like lectin 6 isoform 1
precursor [Homo sapiens]
Length = 453
Score = 176 bits (447), Expect = 1e-44
Identities = 83/108 (76%), Positives = 87/108 (80%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIIT 73
LTHRP I IPGTLE GH NLTCSV W CEQGTPPIFSW+SAAPTSLGPRTT SSVL IT
Sbjct: 144 LTHRPNISIPGTLESGHPSNLTCSVPWVCEQGTPPIFSWMSAAPTSLGPRTTQSSVLTIT 203
Query: 74 PRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGS 121
PRPQDH TNLTCQV F GAGVT ERTIQLNV+Y PQ IF G+ +
Sbjct: 204 PRPQDHSTNLTCQVTFPGAGVTMERTIQLNVSYAPQKVAISIFQGNSA 251
Score = 80.1 bits (196), Expect = 2e-15
Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 123 KQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPK 182
K E RAG V GA+ GA +T L+ LC+C I F VKT R+KAA+ +D +P S S
Sbjct: 339 KPEGRAGGVLGAVWGASITTLVFLCVCFI-FRVKTRRKKAAQPVQNTDDVNPVMVSGSRG 397
Query: 183 HQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPS--KDTSTEYSEVR 235
HQ + + ++ + +G P E ++ELHYA L+FH + P K T TEYSE++
Sbjct: 398 HQHQFQTGIVSDHPAEAG--PISEDEQELHYAVLHFHKVQPQEPKVTDTEYSEIK 450
>gi|193794817 sialic acid binding Ig-like lectin 6 isoform 3
precursor [Homo sapiens]
Length = 353
Score = 176 bits (447), Expect = 1e-44
Identities = 83/108 (76%), Positives = 87/108 (80%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIIT 73
LTHRP I IPGTLE GH NLTCSV W CEQGTPPIFSW+SAAPTSLGPRTT SSVL IT
Sbjct: 144 LTHRPNISIPGTLESGHPSNLTCSVPWVCEQGTPPIFSWMSAAPTSLGPRTTQSSVLTIT 203
Query: 74 PRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGS 121
PRPQDH TNLTCQV F GAGVT ERTIQLNV+Y PQ IF G+ +
Sbjct: 204 PRPQDHSTNLTCQVTFPGAGVTMERTIQLNVSYAPQKVAISIFQGNSA 251
>gi|193794819 sialic acid binding Ig-like lectin 6 isoform 2
precursor [Homo sapiens]
Length = 437
Score = 164 bits (414), Expect = 8e-41
Identities = 77/92 (83%), Positives = 79/92 (85%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIIT 73
LTHRP I IPGTLE GH NLTCSV W CEQGTPPIFSW+SAAPTSLGPRTT SSVL IT
Sbjct: 144 LTHRPNISIPGTLESGHPSNLTCSVPWVCEQGTPPIFSWMSAAPTSLGPRTTQSSVLTIT 203
Query: 74 PRPQDHGTNLTCQVKFAGAGVTTERTIQLNVT 105
PRPQDH TNLTCQV F GAGVT ERTIQLNV+
Sbjct: 204 PRPQDHSTNLTCQVTFPGAGVTMERTIQLNVS 235
Score = 80.1 bits (196), Expect = 2e-15
Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 123 KQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPK 182
K E RAG V GA+ GA +T L+ LC+C I F VKT R+KAA+ +D +P S S
Sbjct: 323 KPEGRAGGVLGAVWGASITTLVFLCVCFI-FRVKTRRKKAAQPVQNTDDVNPVMVSGSRG 381
Query: 183 HQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGMNPS--KDTSTEYSEVR 235
HQ + + ++ + +G P E ++ELHYA L+FH + P K T TEYSE++
Sbjct: 382 HQHQFQTGIVSDHPAEAG--PISEDEQELHYAVLHFHKVQPQEPKVTDTEYSEIK 434
>gi|23943856 sialic acid binding Ig-like lectin 9 [Homo sapiens]
Length = 463
Score = 153 bits (387), Expect = 1e-37
Identities = 70/108 (64%), Positives = 83/108 (76%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIIT 73
LTHRP ILIPGTLE G +NLTCSV WACEQGTPP+ SW+ + + L P TT SSVL +
Sbjct: 142 LTHRPNILIPGTLESGCPQNLTCSVPWACEQGTPPMISWIGTSVSPLDPSTTRSSVLTLI 201
Query: 74 PRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGS 121
P+PQDHGT+LTCQV F GA VTT +T+ LNV+Y PQN T +F GDG+
Sbjct: 202 PQPQDHGTSLTCQVTFPGASVTTNKTVHLNVSYPPQNLTMTVFQGDGT 249
Score = 66.6 bits (161), Expect = 2e-11
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 123 KQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPK 182
+ + +GV G +GGAG TAL+ L C+IF +V++ R+K+AR A G DT +A
Sbjct: 338 QSKATSGVTQGVVGGAGATALVFLSFCVIFVVVRSCRKKSARPAAGVGDTGIEDANAVRG 397
Query: 183 HQKKSKLHGPTETSSCSGAAPTVEM-----DEELHYASLNFHGMNP-----SKDTSTEYS 232
+ L P S P + EL YASL+F + P + T TEYS
Sbjct: 398 SASQGPLTEPWAEDSPPDQPPPASARSSVGEGELQYASLSFQMVKPWDSRGQEATDTEYS 457
Query: 233 EVR 235
E++
Sbjct: 458 EIK 460
>gi|7657570 sialic acid binding Ig-like lectin 7 isoform 1 [Homo
sapiens]
Length = 467
Score = 152 bits (384), Expect = 2e-37
Identities = 71/108 (65%), Positives = 83/108 (76%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIIT 73
LTHRP ILIPGTLE G +NLTCSV WACEQGTPP+ SW+ + + L P TT SSVL +
Sbjct: 146 LTHRPNILIPGTLESGCFQNLTCSVPWACEQGTPPMISWMGTSVSPLHPSTTRSSVLTLI 205
Query: 74 PRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGS 121
P+PQ HGT+LTCQV GAGVTT RTIQLNV+Y PQN T +F G+G+
Sbjct: 206 PQPQHHGTSLTCQVTLPGAGVTTNRTIQLNVSYPPQNLTVTVFQGEGT 253
Score = 71.2 bits (173), Expect = 7e-13
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 29 GHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVK 88
G S L C+V + P SW + T + ++ VL + D G TC+ +
Sbjct: 269 GQSLRLVCAV----DSNPPARLSWTWRSLTLYPSQPSNPLVLELQVHLGDEG-EFTCRAQ 323
Query: 89 FAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCL 148
+ + L Y +GK +GV+ GA+GGAG TAL+ L
Sbjct: 324 NSLGSQHVSLNLSLQQEY--------------TGKMRPVSGVLLGAVGGAGATALVFLSF 369
Query: 149 CLIFFIVKTHRRKAARTA-----VGRNDTHPTTGSASPKHQKKS------KLHGPTETSS 197
C+IF +V++ R+K+AR A +G D + GSAS + +S + HG SS
Sbjct: 370 CVIFIVVRSCRKKSARPAADVGDIGMKDANTIRGSASQGNLTESWADDNPRHHGLAAHSS 429
Query: 198 CSGAAPTVEMDEELHYASLNFHGMNP-----SKDTSTEYSEVR 235
+ E+ YA L+FH P + T+ EYSE++
Sbjct: 430 GE--------EREIQYAPLSFHKGEPQDLSGQEATNNEYSEIK 464
>gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens]
Length = 499
Score = 149 bits (376), Expect = 2e-36
Identities = 71/133 (53%), Positives = 90/133 (67%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIIT 73
LTHRP ILI GTLE GHS+NLTCSV WAC+QGTPP+ SW+ A+ +S GP T SSVL +T
Sbjct: 153 LTHRPDILILGTLESGHSRNLTCSVPWACKQGTPPMISWIGASVSSPGPTTARSSVLTLT 212
Query: 74 PRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHG 133
P+PQDHGT+LTCQV G GVTT T++L+V+Y P N T +F GD + G
Sbjct: 213 PKPQDHGTSLTCQVTLPGTGVTTTSTVRLDVSYPPWNLTMTVFQGDATASTALGNGSSLS 272
Query: 134 AIGGAGVTALLAL 146
+ G + + A+
Sbjct: 273 VLEGQSLRLVCAV 285
Score = 77.4 bits (189), Expect = 1e-14
Identities = 66/219 (30%), Positives = 98/219 (44%), Gaps = 32/219 (14%)
Query: 29 GHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRP--QDHGTNLTCQ 86
G S L C+V+ P SW + T R+++ +L + PR +D G TC+
Sbjct: 276 GQSLRLVCAVN----SNPPARLSWTRGSLTLCPSRSSNPGLLEL-PRVHVRDEG-EFTCR 329
Query: 87 VKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLAL 146
+ A ++ L +G+G + V A+GGAG TAL L
Sbjct: 330 AQNAQGSQHISLSLSLQ--------------NEGTGTSRPVSQVTLAAVGGAGATALAFL 375
Query: 147 CLCLIFFIVKTHRRKAARTAVGRNDT-----HPTTGSASPKHQKKSKLHGPTETSSCSGA 201
C+IF IV++ R+K+AR A G DT GSAS +S G
Sbjct: 376 SFCIIFIIVRSCRKKSARPAAGVGDTGMEDAKAIRGSASQGPLTESWKDGNPLKKPPPAV 435
Query: 202 APTVEMDEELHYASLNFHGMNP-----SKDTSTEYSEVR 235
AP+ + ELHYA+L+FH + P + T +EYSE++
Sbjct: 436 APSSGEEGELHYATLSFHKVKPQDPQGQEATDSEYSEIK 474
>gi|16506826 sialic acid binding immunoglobulin-like lectin-like
protein 1 isoform b precursor [Homo sapiens]
Length = 477
Score = 149 bits (376), Expect = 2e-36
Identities = 69/133 (51%), Positives = 88/133 (66%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIIT 73
LTH P IPGTLE GH +NLTCSV WACEQGTPP +W+ A+ +SL P T SS+L +
Sbjct: 153 LTHMPTFSIPGTLESGHPRNLTCSVPWACEQGTPPTITWMGASVSSLDPTITRSSMLSLI 212
Query: 74 PRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHG 133
P+PQDHGT+LTCQV GAGVT R ++LN++Y PQN T +F GDG+ R G
Sbjct: 213 PQPQDHGTSLTCQVTLPGAGVTMTRAVRLNISYPPQNLTMTVFQGDGTASTTLRNGSALS 272
Query: 134 AIGGAGVTALLAL 146
+ G + + A+
Sbjct: 273 VLEGQSLHLVCAV 285
Score = 70.1 bits (170), Expect = 2e-12
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 40/222 (18%)
Query: 29 GHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRP--QDHGTNLTCQ 86
G S +L C+V + P SW + T L P + + ++ PR +D G TC+
Sbjct: 276 GQSLHLVCAV----DSNPPARLSWTWGSLT-LSPSQSSNLGVLELPRVHVKDEG-EFTCR 329
Query: 87 VKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLAL 146
+ ++ L Y +GK +GV GA GGAG TAL+ L
Sbjct: 330 AQNPLGSQHISLSLSLQNEY--------------TGKMRPISGVTLGAFGGAGATALVFL 375
Query: 147 CLCLIFFIVKTHRRKAARTAVGRNDT-----HPTTGSASPKHQKKSKLHGPTETSSCSGA 201
C+IF +V++ R+K+AR AVG DT + GSAS + + P + S A
Sbjct: 376 YFCIIFVVVRSCRKKSARPAVGVGDTGMEDANAVRGSAS----QGPLIESPADDSPPHHA 431
Query: 202 APTVEM----DEELHYASLNFHGMNP-----SKDTSTEYSEV 234
P + + E+ YASL+FH P + EYSE+
Sbjct: 432 PPALATPSPEEGEIQYASLSFHKARPQYPQEQEAIGYEYSEI 473
>gi|16506828 sialic acid binding immunoglobulin-like lectin-like
protein 1 isoform a precursor [Homo sapiens]
Length = 595
Score = 149 bits (376), Expect = 2e-36
Identities = 69/133 (51%), Positives = 88/133 (66%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIIT 73
LTH P IPGTLE GH +NLTCSV WACEQGTPP +W+ A+ +SL P T SS+L +
Sbjct: 271 LTHMPTFSIPGTLESGHPRNLTCSVPWACEQGTPPTITWMGASVSSLDPTITRSSMLSLI 330
Query: 74 PRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHG 133
P+PQDHGT+LTCQV GAGVT R ++LN++Y PQN T +F GDG+ R G
Sbjct: 331 PQPQDHGTSLTCQVTLPGAGVTMTRAVRLNISYPPQNLTMTVFQGDGTASTTLRNGSALS 390
Query: 134 AIGGAGVTALLAL 146
+ G + + A+
Sbjct: 391 VLEGQSLHLVCAV 403
Score = 70.1 bits (170), Expect = 2e-12
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 40/222 (18%)
Query: 29 GHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRP--QDHGTNLTCQ 86
G S +L C+V + P SW + T L P + + ++ PR +D G TC+
Sbjct: 394 GQSLHLVCAV----DSNPPARLSWTWGSLT-LSPSQSSNLGVLELPRVHVKDEG-EFTCR 447
Query: 87 VKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLAL 146
+ ++ L Y +GK +GV GA GGAG TAL+ L
Sbjct: 448 AQNPLGSQHISLSLSLQNEY--------------TGKMRPISGVTLGAFGGAGATALVFL 493
Query: 147 CLCLIFFIVKTHRRKAARTAVGRNDT-----HPTTGSASPKHQKKSKLHGPTETSSCSGA 201
C+IF +V++ R+K+AR AVG DT + GSAS + + P + S A
Sbjct: 494 YFCIIFVVVRSCRKKSARPAVGVGDTGMEDANAVRGSAS----QGPLIESPADDSPPHHA 549
Query: 202 APTVEM----DEELHYASLNFHGMNP-----SKDTSTEYSEV 234
P + + E+ YASL+FH P + EYSE+
Sbjct: 550 PPALATPSPEEGEIQYASLSFHKARPQYPQEQEAIGYEYSEI 591
>gi|148762980 sialic acid binding Ig-like lectin 14 [Homo sapiens]
Length = 396
Score = 116 bits (290), Expect = 2e-26
Identities = 59/109 (54%), Positives = 70/109 (64%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIIT 73
L +P I LE G L+CS+ +CE G P FSW A + L P TT SS L +T
Sbjct: 142 LIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPETTRSSELTLT 201
Query: 74 PRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSG 122
PRP+DHGTNLTCQVK GA VTTERT+QLNV+Y PQN IF +G+G
Sbjct: 202 PRPEDHGTNLTCQVKRQGAQVTTERTVQLNVSYAPQNLAISIFFRNGTG 250
>gi|4502659 sialic acid binding Ig-like lectin 5 [Homo sapiens]
Length = 551
Score = 108 bits (269), Expect = 5e-24
Identities = 54/99 (54%), Positives = 64/99 (64%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIIT 73
L +P I LE G L+CS+ +CE G P FSW A + L P TT SS L +T
Sbjct: 142 LIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPETTRSSELTLT 201
Query: 74 PRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPT 112
PRP+DHGTNLTCQ+K GA VTTERT+QLNV+Y PQ T
Sbjct: 202 PRPEDHGTNLTCQMKRQGAQVTTERTVQLNVSYAPQTIT 240
Score = 88.6 bits (218), Expect = 4e-18
Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
Query: 122 GKQETRAGVVHGAIGGAGVTALLALCLCLIFF-IVKTHRRKAARTAVGRNDTHPTTGSAS 180
G+ GVV A+GGAGV ALL +CLCLIFF IVK R++AA +D P G+ +
Sbjct: 428 GRSNLGTGVVPAALGGAGVMALLCICLCLIFFLIVKARRKQAAGRPEKMDDEDPIMGTIT 487
Query: 181 PKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASLNFHGM------NPSKDTSTEYSEV 234
+KK P + +S G AP +E +ELHYASL+F M + ++TEYSE+
Sbjct: 488 SGSRKKPWPDSPGDQASPPGDAPPLEEQKELHYASLSFSEMKSREPKDQEAPSTTEYSEI 547
Query: 235 RT 236
+T
Sbjct: 548 KT 549
>gi|31377639 sialic acid binding Ig-like lectin 10 [Homo sapiens]
Length = 697
Score = 105 bits (261), Expect = 4e-23
Identities = 50/99 (50%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLG--PRTTHSSVLI 71
LT +P + IP TLEPG + C +WA E+ PP FSW AA +S G P T+H SVL
Sbjct: 142 LTQKPDVYIPETLEPGQPVTVICVFNWAFEECPPPSFSWTGAALSSQGTKPTTSHFSVLS 201
Query: 72 ITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQN 110
TPRPQDH T+LTC V F+ GV+ +RT++L V Y P++
Sbjct: 202 FTPRPQDHNTDLTCHVDFSRKGVSAQRTVRLRVAYAPRD 240
Score = 56.2 bits (134), Expect = 2e-08
Identities = 45/148 (30%), Positives = 59/148 (39%), Gaps = 42/148 (28%)
Query: 132 HGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTH----------PTTGSASP 181
+GA G G+TALL LCL LI + RR T R H PT G +
Sbjct: 550 NGAFLGIGITALLFLCLALIIMKILPKRRTQTETPRPRFSRHSTILDYINVVPTAGPLAQ 609
Query: 182 KHQKKSKLHGP--------------------------TETSSCSGAAPTVEMDEELHYAS 215
K +K+ + P E S + A + E EELHYA+
Sbjct: 610 KRNQKATPNSPRTPLPPGAPSPESKKNQKKQYQLPSFPEPKSSTQAPESQESQEELHYAT 669
Query: 216 LNFHGMNP------SKDTSTEYSEVRTQ 237
LNF G+ P K T +Y+EV+ Q
Sbjct: 670 LNFPGVRPRPEARMPKGTQADYAEVKFQ 697
>gi|205830473 sialic acid binding Ig-like lectin 11 isoform 2 [Homo
sapiens]
Length = 602
Score = 96.3 bits (238), Expect = 2e-20
Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAA--PTSLGPRTTHSSVLI 71
LT +P + IP TLEPG + C +WA ++ P FSW AA P P T+H SVL
Sbjct: 155 LTKKPDVYIPETLEPGQPVTVICVFNWAFKKCPAPSFSWTGAALSPRRTRPSTSHFSVLS 214
Query: 72 ITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVV 131
TP PQDH T+LTC V F+ GV+ +RT++L V Y P++ I D + E + V+
Sbjct: 215 FTPSPQDHDTDLTCHVDFSRKGVSAQRTVRLRVAYAPKDLIISI-SHDNTSALELQGNVI 273
Query: 132 H 132
+
Sbjct: 274 Y 274
Score = 72.4 bits (176), Expect = 3e-13
Identities = 63/216 (29%), Positives = 90/216 (41%), Gaps = 32/216 (14%)
Query: 29 GHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVK 88
G S L C P SW T + + VL + P +H TC +
Sbjct: 384 GQSLRLVC----VTHSSPPARLSWTRWGQTVGPSQPSDPGVLELPPIQMEHEGEFTCHAQ 439
Query: 89 FAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCL 148
+ ++ L+V + K E G+ GA GAGV ALLA C
Sbjct: 440 HPLG--SQHVSLSLSVHW----------------KLEHGGGLGLGAALGAGVAALLAFCS 481
Query: 149 CLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSCSGAA---PTV 205
CL+ F VK R++A + A D T G S HQ + G ++ GAA P
Sbjct: 482 CLVVFRVKICRKEARKRAAAEQDVPSTLGPISQGHQHECSA-GSSQDHPPPGAATYTPGK 540
Query: 206 EMDEELHYASLNFHGM------NPSKDTSTEYSEVR 235
++ELHYASL+F G+ + ++TEYSE++
Sbjct: 541 GEEQELHYASLSFQGLRLWEPADQEAPSTTEYSEIK 576
>gi|205830470 sialic acid binding Ig-like lectin 11 isoform 1 [Homo
sapiens]
Length = 698
Score = 96.3 bits (238), Expect = 2e-20
Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 14 LTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLSAA--PTSLGPRTTHSSVLI 71
LT +P + IP TLEPG + C +WA ++ P FSW AA P P T+H SVL
Sbjct: 155 LTKKPDVYIPETLEPGQPVTVICVFNWAFKKCPAPSFSWTGAALSPRRTRPSTSHFSVLS 214
Query: 72 ITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVV 131
TP PQDH T+LTC V F+ GV+ +RT++L V Y P++ I D + E + V+
Sbjct: 215 FTPSPQDHDTDLTCHVDFSRKGVSAQRTVRLRVAYAPKDLIISI-SHDNTSALELQGNVI 273
Query: 132 H 132
+
Sbjct: 274 Y 274
Score = 73.2 bits (178), Expect = 2e-13
Identities = 48/123 (39%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 122 GKQETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASP 181
GK E G+ GA GAGV ALLA C CL+ F VK R++A + A D T G S
Sbjct: 551 GKLEHGGGLGLGAALGAGVAALLAFCSCLVVFRVKICRKEARKRAAAEQDVPSTLGPISQ 610
Query: 182 KHQKKSKLHGPTETSSCSGAA---PTVEMDEELHYASLNFHGM------NPSKDTSTEYS 232
HQ + G ++ GAA P ++ELHYASL+F G+ + ++TEYS
Sbjct: 611 GHQHECSA-GSSQDHPPPGAATYTPGKGEEQELHYASLSFQGLRLWEPADQEAPSTTEYS 669
Query: 233 EVR 235
E++
Sbjct: 670 EIK 672
>gi|118197279 sialic acid binding Ig-like lectin 7 isoform 2 [Homo
sapiens]
Length = 374
Score = 71.2 bits (173), Expect = 7e-13
Identities = 63/223 (28%), Positives = 97/223 (43%), Gaps = 43/223 (19%)
Query: 29 GHSKNLTCSVSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVK 88
G S L C+V + P SW + T + ++ VL + D G TC+ +
Sbjct: 176 GQSLRLVCAV----DSNPPARLSWTWRSLTLYPSQPSNPLVLELQVHLGDEG-EFTCRAQ 230
Query: 89 FAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAGVTALLALCL 148
+ + L Y +GK +GV+ GA+GGAG TAL+ L
Sbjct: 231 NSLGSQHVSLNLSLQQEY--------------TGKMRPVSGVLLGAVGGAGATALVFLSF 276
Query: 149 CLIFFIVKTHRRKAARTA-----VGRNDTHPTTGSASPKHQKKS------KLHGPTETSS 197
C+IF +V++ R+K+AR A +G D + GSAS + +S + HG SS
Sbjct: 277 CVIFIVVRSCRKKSARPAADVGDIGMKDANTIRGSASQGNLTESWADDNPRHHGLAAHSS 336
Query: 198 CSGAAPTVEMDEELHYASLNFHGMNP-----SKDTSTEYSEVR 235
+ E+ YA L+FH P + T+ EYSE++
Sbjct: 337 GE--------EREIQYAPLSFHKGEPQDLSGQEATNNEYSEIK 371
>gi|4758822 nephrin precursor [Homo sapiens]
Length = 1241
Score = 43.9 bits (102), Expect = 1e-04
Identities = 31/92 (33%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 24 GTLEPGHSKNLTCSVSWACEQGTP-PIFSWL-SAAPTSLGPRTTHS-----SVLIITPRP 76
G + G S L C G P WL + P S T H+ SVL++T RP
Sbjct: 253 GHVRAGQSLELPC----VARGGNPLATLQWLKNGQPVSTAWGTEHTQAVARSVLVMTVRP 308
Query: 77 QDHGTNLTCQVKFAGAGVTTERTIQLNVTYVP 108
+DHG L+C+ + + T E I L VT+ P
Sbjct: 309 EDHGAQLSCEAHNSVSAGTQEHGITLQVTFPP 340
Score = 34.7 bits (78), Expect = 0.074
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 17/96 (17%)
Query: 26 LEPGHSKNLTC-SVSWACEQGTPPI-FSWLS--------AAPTSLGPRTTHSSV--LIIT 73
L PG + NLTC SVS PP+ SW AAP P ++ +++
Sbjct: 557 LRPGDALNLTCVSVS-----SNPPVNLSWDKEGERLEGVAAPPRRAPFKGSAAARSVLLQ 611
Query: 74 PRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQ 109
+DHG +TC+ A T +LNV Y P+
Sbjct: 612 VSSRDHGQRVTCRAHSAELRETVSSFYRLNVLYRPE 647
>gi|157168355 CD22 molecule [Homo sapiens]
Length = 847
Score = 43.1 bits (100), Expect = 2e-04
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 18 PKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWL---------SAAPTSLGPRTTHS- 67
P I +P ++ LTC ++++C G P WL + TSL ++ +
Sbjct: 143 PHIQLPPEIQESQEVTLTCLLNFSC-YGYPIQLQWLLEGVPMRQAAVTSTSLTIKSVFTR 201
Query: 68 SVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQ 109
S L +P+ HG +TCQ++ A + T+QLNV + P+
Sbjct: 202 SELKFSPQWSHHGKIVTCQLQDADGKFLSNDTVQLNVKHTPK 243
>gi|226958551 Fc receptor-like 1 isoform 3 precursor [Homo sapiens]
Length = 428
Score = 36.6 bits (83), Expect = 0.019
Identities = 41/157 (26%), Positives = 59/157 (37%), Gaps = 29/157 (18%)
Query: 42 CE--QGTPPIFSWLSAAPTSLGPRTTHS--SVLIITPRPQDHGTNLTCQVKFAGAGVTTE 97
CE +G+PPI W +LG R+ S ++H N +C+ G G
Sbjct: 229 CEALRGSPPILYWFYHEDITLGSRSAPSGGGASFNLSLTEEHSGNYSCEAN-NGLGAQRS 287
Query: 98 RTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAG-VTALLALCLCLIFFIVK 156
+ LN T PT G+ +GV+ G + G T L C L
Sbjct: 288 EAVTLNFTV----PT-------GARSNHLTSGVIEGLLSTLGPATVALLFCYGL------ 330
Query: 157 THRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGPT 193
+RK R R+ P SP Q+ + L+ PT
Sbjct: 331 --KRKIGR----RSARDPLRSLPSPLPQEFTYLNSPT 361
>gi|16418419 Fc receptor-like 1 isoform 1 precursor [Homo sapiens]
Length = 429
Score = 36.6 bits (83), Expect = 0.019
Identities = 41/157 (26%), Positives = 59/157 (37%), Gaps = 29/157 (18%)
Query: 42 CE--QGTPPIFSWLSAAPTSLGPRTTHS--SVLIITPRPQDHGTNLTCQVKFAGAGVTTE 97
CE +G+PPI W +LG R+ S ++H N +C+ G G
Sbjct: 229 CEALRGSPPILYWFYHEDITLGSRSAPSGGGASFNLSLTEEHSGNYSCEAN-NGLGAQRS 287
Query: 98 RTIQLNVTYVPQNPTTGIFPGDGSGKQETRAGVVHGAIGGAG-VTALLALCLCLIFFIVK 156
+ LN T PT G+ +GV+ G + G T L C L
Sbjct: 288 EAVTLNFTV----PT-------GARSNHLTSGVIEGLLSTLGPATVALLFCYGL------ 330
Query: 157 THRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGPT 193
+RK R R+ P SP Q+ + L+ PT
Sbjct: 331 --KRKIGR----RSARDPLRSLPSPLPQEFTYLNSPT 361
>gi|11225258 myelin associated glycoprotein isoform a precursor
[Homo sapiens]
Length = 626
Score = 35.0 bits (79), Expect = 0.057
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 11/106 (10%)
Query: 13 DLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLS----AAPTSLGPRTTHS- 67
D+ + P I++P + G ++C V C + P + SWL P LG
Sbjct: 136 DIVNTPNIVVPPEVVAGTEVEVSCMVPDNCPELRPEL-SWLGHEGLGEPAVLGRLREDEG 194
Query: 68 -----SVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVP 108
S+L P + +G L CQ F + E ++V Y P
Sbjct: 195 TWVQVSLLHFVPTREANGHRLGCQASFPNTTLQFEGYASMDVKYPP 240
>gi|18104957 myelin associated glycoprotein isoform b precursor
[Homo sapiens]
Length = 582
Score = 35.0 bits (79), Expect = 0.057
Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 11/106 (10%)
Query: 13 DLTHRPKILIPGTLEPGHSKNLTCSVSWACEQGTPPIFSWLS----AAPTSLGPRTTHS- 67
D+ + P I++P + G ++C V C + P + SWL P LG
Sbjct: 136 DIVNTPNIVVPPEVVAGTEVEVSCMVPDNCPELRPEL-SWLGHEGLGEPAVLGRLREDEG 194
Query: 68 -----SVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVP 108
S+L P + +G L CQ F + E ++V Y P
Sbjct: 195 TWVQVSLLHFVPTREANGHRLGCQASFPNTTLQFEGYASMDVKYPP 240
>gi|13489095 sialoadhesin precursor [Homo sapiens]
Length = 1709
Score = 34.3 bits (77), Expect = 0.097
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
Query: 25 TLEPGHSKNLTCSVSWACEQGTPPIFSWL-SAAPTSLGPRTTHSSVLIITPRPQDHGTNL 83
TL+ G NLTC+VS G+P FSW + + GP T + + P +
Sbjct: 718 TLQEGTEANLTCNVSREA-AGSPANFSWFRNGVLWAQGPLET----VTLLPVARTDAALY 772
Query: 84 TCQVKFAGAGVTTERTIQLNVTYVPQNPTTGIFPGDGSG 122
C++ AG + L+V Y P P G G
Sbjct: 773 ACRI-LTEAGAQLSTPVLLSVLYPPDRPKLSALLDMGQG 810
Score = 33.1 bits (74), Expect = 0.22
Identities = 31/104 (29%), Positives = 39/104 (37%), Gaps = 18/104 (17%)
Query: 18 PKILIPGTLEPGHSKNLTCSVSWACEQ--------GTPPI----FSWLSAAPTSLGPRTT 65
P I P L G + CS + C Q G P F+ PT +G
Sbjct: 142 PTIASPVELLEGTEVDFNCSTPYVCLQEQVRLQWQGQDPARSVTFNSQKFEPTGVG---- 197
Query: 66 HSSVLIITPRPQDHGTNLTCQVKFAGAGVTTERTIQLNVTYVPQ 109
H L + QDHG L CQ+ A +E I L V Y P+
Sbjct: 198 HLETLHMAMSWQDHGRILRCQLSVANHRAQSE--IHLQVKYAPK 239
>gi|209413732 poliovirus receptor isoform delta [Homo sapiens]
Length = 392
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 38 VSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTE 97
++W + G P S P L T +S+ I+ P Q G N+TC+V+
Sbjct: 177 ITWHSDLGGMPN---TSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQL 233
Query: 98 RTIQLNVTYVPQNPTTG 114
T+ L V Y P+ +G
Sbjct: 234 LTVNLTVYYPPEVSISG 250
>gi|209413730 poliovirus receptor isoform gamma [Homo sapiens]
Length = 364
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 38 VSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTE 97
++W + G P S P L T +S+ I+ P Q G N+TC+V+
Sbjct: 177 ITWHSDLGGMPN---TSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQL 233
Query: 98 RTIQLNVTYVPQNPTTG 114
T+ L V Y P+ +G
Sbjct: 234 LTVNLTVYYPPEVSISG 250
>gi|209413728 poliovirus receptor isoform beta [Homo sapiens]
Length = 372
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 38 VSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTE 97
++W + G P S P L T +S+ I+ P Q G N+TC+V+
Sbjct: 177 ITWHSDLGGMPN---TSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQL 233
Query: 98 RTIQLNVTYVPQNPTTG 114
T+ L V Y P+ +G
Sbjct: 234 LTVNLTVYYPPEVSISG 250
>gi|209413726 poliovirus receptor isoform alpha [Homo sapiens]
Length = 417
Score = 33.5 bits (75), Expect = 0.16
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 38 VSWACEQGTPPIFSWLSAAPTSLGPRTTHSSVLIITPRPQDHGTNLTCQVKFAGAGVTTE 97
++W + G P S P L T +S+ I+ P Q G N+TC+V+
Sbjct: 177 ITWHSDLGGMPN---TSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQL 233
Query: 98 RTIQLNVTYVPQNPTTG 114
T+ L V Y P+ +G
Sbjct: 234 LTVNLTVYYPPEVSISG 250
>gi|126362957 leukocyte immunoglobulin-like receptor, subfamily B,
member 1 isoform 4 [Homo sapiens]
Length = 651
Score = 32.0 bits (71), Expect = 0.48
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 20/120 (16%)
Query: 108 PQNPTTGIFPGDGSGKQ---------ETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTH 158
P +PTTG G Q ++ G G + G V +L L L L+ F++ H
Sbjct: 426 PSSPTTGPTSTSGPEDQPLTPTGSDPQSGLGRHLGVVIGILVAVILLLLLLLLLFLILRH 485
Query: 159 RRKAAR-TAVGRN-DTHPTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASL 216
RR+ T+ R D G+ P+ PT+ ++P + EE YA++
Sbjct: 486 RRQGKHWTSTQRKADFQHPAGAVGPE---------PTDRGLQWRSSPAADAQEENLYAAV 536
>gi|116488411 leukocyte immunoglobulin-like receptor, subfamily B,
member 1 isoform 1 [Homo sapiens]
Length = 650
Score = 32.0 bits (71), Expect = 0.48
Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 20/120 (16%)
Query: 108 PQNPTTGIFPGDGSGKQ---------ETRAGVVHGAIGGAGVTALLALCLCLIFFIVKTH 158
P +PTTG G Q ++ G G + G V +L L L L+ F++ H
Sbjct: 426 PSSPTTGPTSTSGPEDQPLTPTGSDPQSGLGRHLGVVIGILVAVILLLLLLLLLFLILRH 485
Query: 159 RRKAAR-TAVGRN-DTHPTTGSASPKHQKKSKLHGPTETSSCSGAAPTVEMDEELHYASL 216
RR+ T+ R D G+ P+ PT+ ++P + EE YA++
Sbjct: 486 RRQGKHWTSTQRKADFQHPAGAVGPE---------PTDRGLQWRSSPAADAQEENLYAAV 536
>gi|113206030 mucin 1 isoform 8 precursor [Homo sapiens]
Length = 158
Score = 31.6 bits (70), Expect = 0.63
Identities = 19/60 (31%), Positives = 26/60 (43%)
Query: 139 GVTALLALCLCLIFFIVKTHRRKAARTAVGRNDTHPTTGSASPKHQKKSKLHGPTETSSC 198
G + L L L V T A+ T G +T T S+ P +K+ + PT T SC
Sbjct: 4 GTQSPFFLLLLLTVLTVVTGSGHASSTPGGEKETSATQRSSVPSSTEKNAIPAPTTTKSC 63
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,915,570
Number of Sequences: 37866
Number of extensions: 544327
Number of successful extensions: 1673
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1554
Number of HSP's gapped (non-prelim): 131
length of query: 237
length of database: 18,247,518
effective HSP length: 99
effective length of query: 138
effective length of database: 14,498,784
effective search space: 2000832192
effective search space used: 2000832192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.