Guide to the Human Genome
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Name: PPIL4 Sequence: fasta or formatted (492aa) NCBI GI: 20911035
Description:

peptidylprolyl isomerase-like 4

Referenced in:

Peptidylprolyl Isomerases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.8         14           1
 C cysteine            1.8          9           1
 D aspartate           9.8         48           2
 E glutamate          10.4         51           4
 F phenylalanine       4.3         21           2
 G glycine             5.5         27           2
 H histidine           2.8         14           2
 I isoleucine          6.1         30           2
 K lysine             11.4         56           3
 L leucine             5.9         29           2
 M methionine          1.4          7           1
 N asparagine          3.3         16           2
 P proline             4.1         20           2
 Q glutamine           3.5         17           1
 R arginine            5.9         29           2
 S serine              6.7         33           2
 T threonine           5.1         25           2
 V valine              5.1         25           2
 W tryptophan          0.6          3           1
 Y tyrosine            3.7         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peptidylprolyl isomerase-like 4 
PPIL3                 0.115   peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo...
PPIL3                 0.115   peptidylprolyl isomerase-like 3 isoform PPIL3b [Homo...
SDCCAG10              0.111   serologically defined colon cancer antigen 10 
PPIL2                 0.098   peptidylprolyl isomerase-like 2 isoform b 
PPIL2                 0.098   peptidylprolyl isomerase-like 2 isoform a 
PPIL2                 0.098   peptidylprolyl isomerase-like 2 isoform a 
PPIL1                 0.097   peptidylprolyl isomerase-like 1 
PPWD1                 0.088   peptidylprolyl isomerase domain and WD repeat contai...
PPIG                  0.085   peptidylprolyl isomerase G 
PPIB                  0.071   peptidylprolyl isomerase B precursor 
NKTR                  0.071   natural killer-tumor recognition sequence 
PPIF                  0.062   peptidylprolyl isomerase F precursor 
PPIL3                 0.058   peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo...
PPIC                  0.058   peptidylprolyl isomerase C 
FUSIP1                0.056   FUS interacting protein (serine-arginine rich) 1 iso...
PPID                  0.055   peptidylprolyl isomerase D 
RANBP2                0.055   RAN binding protein 2 
PPIE                  0.055   peptidylprolyl isomerase E isoform 3 
PPIE                  0.055   peptidylprolyl isomerase E isoform 1 
PPIE                  0.053   peptidylprolyl isomerase E isoform 2 
PPIL6                 0.052   peptidylprolyl isomerase-like 6 isoform 1 
PPIL6                 0.052   peptidylprolyl isomerase-like 6 isoform 2 
SNRNP35               0.051   small nuclear ribonucleoprotein 35kDa (U11/U12) isof...
SNRNP35               0.051   small nuclear ribonucleoprotein 35kDa (U11/U12) isof...
SNRNP35               0.051   small nuclear ribonucleoprotein 35kDa (U11/U12) isof...
SNRNP70               0.051   U1 small nuclear ribonucleoprotein 70 kDa 
PPIA                  0.050   peptidylprolyl isomerase A 
PPIH                  0.048   peptidylprolyl isomerase H 
LOC643997             0.045   PREDICTED: similar to TRIMCyp isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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