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Search of human proteins with 12707562
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|12707562 period 2 [Homo sapiens]
(1255 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|12707562 period 2 [Homo sapiens] 2544 0.0
gi|194097341 period 1 [Homo sapiens] 910 0.0
gi|8567388 period 3 [Homo sapiens] 613 e-175
gi|31745180 aryl hydrocarbon receptor nuclear translocator-like ... 109 1e-23
gi|71852580 aryl hydrocarbon receptor nuclear translocator-like ... 89 3e-17
gi|42716311 aryl hydrocarbon receptor nuclear translocator-like ... 89 3e-17
gi|71852582 aryl hydrocarbon receptor nuclear translocator-like ... 87 8e-17
gi|4502231 aryl hydrocarbon receptor nuclear translocator isofor... 73 1e-12
gi|68303555 aryl hydrocarbon receptor nuclear translocator 2 [Ho... 72 3e-12
gi|30795242 aryl hydrocarbon receptor nuclear translocator isofo... 69 2e-11
gi|22027471 neuronal PAS domain protein 2 [Homo sapiens] 67 1e-10
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 62 3e-09
gi|163965366 nascent polypeptide-associated complex alpha subuni... 60 1e-08
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 55 4e-07
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 55 4e-07
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 4e-07
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 55 4e-07
gi|4758010 clock [Homo sapiens] 54 7e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 54 7e-07
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 54 9e-07
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 54 1e-06
gi|50345997 E1A binding protein p300 [Homo sapiens] 53 2e-06
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 52 3e-06
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 52 3e-06
gi|47132519 Ras association and pleckstrin homology domains 1 is... 52 3e-06
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 52 4e-06
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 52 4e-06
gi|50345881 cytoplasmic polyadenylation element binding protein ... 51 6e-06
gi|24431935 reticulon 4 isoform A [Homo sapiens] 51 6e-06
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 50 1e-05
>gi|12707562 period 2 [Homo sapiens]
Length = 1255
Score = 2544 bits (6593), Expect = 0.0
Identities = 1255/1255 (100%), Positives = 1255/1255 (100%)
Query: 1 MNGYAEFPPSPSNPTKEPVEPQPSQVPLQEDVDMSSGSSGHETNENCSTGRDSQGSDCDD 60
MNGYAEFPPSPSNPTKEPVEPQPSQVPLQEDVDMSSGSSGHETNENCSTGRDSQGSDCDD
Sbjct: 1 MNGYAEFPPSPSNPTKEPVEPQPSQVPLQEDVDMSSGSSGHETNENCSTGRDSQGSDCDD 60
Query: 61 SGKELGMLVEPPDARQSPDTFSLMMAKSEHNPSTSGCSSDQSSKVDTHKELIKTLKELKV 120
SGKELGMLVEPPDARQSPDTFSLMMAKSEHNPSTSGCSSDQSSKVDTHKELIKTLKELKV
Sbjct: 61 SGKELGMLVEPPDARQSPDTFSLMMAKSEHNPSTSGCSSDQSSKVDTHKELIKTLKELKV 120
Query: 121 HLPADKKAKGKASTLATLKYALRSVKQVKANEEYYQLLMSSEGHPCGADVPSYTVEEMES 180
HLPADKKAKGKASTLATLKYALRSVKQVKANEEYYQLLMSSEGHPCGADVPSYTVEEMES
Sbjct: 121 HLPADKKAKGKASTLATLKYALRSVKQVKANEEYYQLLMSSEGHPCGADVPSYTVEEMES 180
Query: 181 VTSEHIVKNADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEFLAPHDVGVFH 240
VTSEHIVKNADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEFLAPHDVGVFH
Sbjct: 181 VTSEHIVKNADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEFLAPHDVGVFH 240
Query: 241 SFTSPYKLPLWSMCSGADSFTQECMEEKSFFCRVSVRKSHENEIRYHPFRMTPYLVKVRD 300
SFTSPYKLPLWSMCSGADSFTQECMEEKSFFCRVSVRKSHENEIRYHPFRMTPYLVKVRD
Sbjct: 241 SFTSPYKLPLWSMCSGADSFTQECMEEKSFFCRVSVRKSHENEIRYHPFRMTPYLVKVRD 300
Query: 301 QQGAESQLCCLLLAERVHSGYEAPRIPPEKRIFTTTHTPNCLFQDVDERAVPLLGYLPQD 360
QQGAESQLCCLLLAERVHSGYEAPRIPPEKRIFTTTHTPNCLFQDVDERAVPLLGYLPQD
Sbjct: 301 QQGAESQLCCLLLAERVHSGYEAPRIPPEKRIFTTTHTPNCLFQDVDERAVPLLGYLPQD 360
Query: 361 LIETPVLVQLHPSDRPLMLAIHKKILQSGGQPFDYSPIRFRARNGEYITLDTSWSSFINP 420
LIETPVLVQLHPSDRPLMLAIHKKILQSGGQPFDYSPIRFRARNGEYITLDTSWSSFINP
Sbjct: 361 LIETPVLVQLHPSDRPLMLAIHKKILQSGGQPFDYSPIRFRARNGEYITLDTSWSSFINP 420
Query: 421 WSRKISFIIGRHKVRVGPLNEDVFAAHPCTEEKALHPSIQELTEQIHRLLLQPVPHSGSS 480
WSRKISFIIGRHKVRVGPLNEDVFAAHPCTEEKALHPSIQELTEQIHRLLLQPVPHSGSS
Sbjct: 421 WSRKISFIIGRHKVRVGPLNEDVFAAHPCTEEKALHPSIQELTEQIHRLLLQPVPHSGSS 480
Query: 481 GYGSLGSNGSHEHLMSQTSSSDSNGHEDSRRRRAEICKNGNKTKNRSHYSHESGEQKKKS 540
GYGSLGSNGSHEHLMSQTSSSDSNGHEDSRRRRAEICKNGNKTKNRSHYSHESGEQKKKS
Sbjct: 481 GYGSLGSNGSHEHLMSQTSSSDSNGHEDSRRRRAEICKNGNKTKNRSHYSHESGEQKKKS 540
Query: 541 VTEMQTNPPAEKKAVPAMEKDSLGVSFPEELACKNQPTCSYQQISCLDSVIRYLESCNEA 600
VTEMQTNPPAEKKAVPAMEKDSLGVSFPEELACKNQPTCSYQQISCLDSVIRYLESCNEA
Sbjct: 541 VTEMQTNPPAEKKAVPAMEKDSLGVSFPEELACKNQPTCSYQQISCLDSVIRYLESCNEA 600
Query: 601 ATLKRKCEFPANVPALRSSDKRKATVSPGPHAGEAEPPSRVNSRTGVGTHLTSLALPGKA 660
ATLKRKCEFPANVPALRSSDKRKATVSPGPHAGEAEPPSRVNSRTGVGTHLTSLALPGKA
Sbjct: 601 ATLKRKCEFPANVPALRSSDKRKATVSPGPHAGEAEPPSRVNSRTGVGTHLTSLALPGKA 660
Query: 661 ESVASLTSQCSYSSTIVHVGDKKPQPELEMVEDAASGPESLDCLAGPALACGLSQEKEPF 720
ESVASLTSQCSYSSTIVHVGDKKPQPELEMVEDAASGPESLDCLAGPALACGLSQEKEPF
Sbjct: 661 ESVASLTSQCSYSSTIVHVGDKKPQPELEMVEDAASGPESLDCLAGPALACGLSQEKEPF 720
Query: 721 KKLGLTKEVLAAHTQKEEQSFLQKFKEIRKLSIFQSHCHYYLQERSKGQPSERTAPGLRN 780
KKLGLTKEVLAAHTQKEEQSFLQKFKEIRKLSIFQSHCHYYLQERSKGQPSERTAPGLRN
Sbjct: 721 KKLGLTKEVLAAHTQKEEQSFLQKFKEIRKLSIFQSHCHYYLQERSKGQPSERTAPGLRN 780
Query: 781 TSGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGPVSARPPLVGLNATAWSPSDTSQSS 840
TSGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGPVSARPPLVGLNATAWSPSDTSQSS
Sbjct: 781 TSGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGPVSARPPLVGLNATAWSPSDTSQSS 840
Query: 841 CPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPL 900
CPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPL
Sbjct: 841 CPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPL 900
Query: 901 APVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPC 960
APVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPC
Sbjct: 901 APVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPC 960
Query: 961 ACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQLEEAPEGGTGAMGTTGATETAAVGA 1020
ACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQLEEAPEGGTGAMGTTGATETAAVGA
Sbjct: 961 ACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQLEEAPEGGTGAMGTTGATETAAVGA 1020
Query: 1021 DCKPGTSRDQQPKAPLTRDEPSDTQNSDALSTSSGLLNLLLNEDLCSASGSAASESLGSG 1080
DCKPGTSRDQQPKAPLTRDEPSDTQNSDALSTSSGLLNLLLNEDLCSASGSAASESLGSG
Sbjct: 1021 DCKPGTSRDQQPKAPLTRDEPSDTQNSDALSTSSGLLNLLLNEDLCSASGSAASESLGSG 1080
Query: 1081 SLGCDASPSGAGSSDTSHTSKYFGSIDSSENNHKAKMNTGMEESEHFIKCVLQDPIWLLM 1140
SLGCDASPSGAGSSDTSHTSKYFGSIDSSENNHKAKMNTGMEESEHFIKCVLQDPIWLLM
Sbjct: 1081 SLGCDASPSGAGSSDTSHTSKYFGSIDSSENNHKAKMNTGMEESEHFIKCVLQDPIWLLM 1140
Query: 1141 ADADSSVMMTYQLPSRNLEAVLKEDREKLKLLQKLQPRFTESQKQELREVHQWMQTGGLP 1200
ADADSSVMMTYQLPSRNLEAVLKEDREKLKLLQKLQPRFTESQKQELREVHQWMQTGGLP
Sbjct: 1141 ADADSSVMMTYQLPSRNLEAVLKEDREKLKLLQKLQPRFTESQKQELREVHQWMQTGGLP 1200
Query: 1201 AAIDVAECVYCENKEKGNICIPYEEDIPSLGLSEVSDTKEDENGSPLNHRIEEQT 1255
AAIDVAECVYCENKEKGNICIPYEEDIPSLGLSEVSDTKEDENGSPLNHRIEEQT
Sbjct: 1201 AAIDVAECVYCENKEKGNICIPYEEDIPSLGLSEVSDTKEDENGSPLNHRIEEQT 1255
>gi|194097341 period 1 [Homo sapiens]
Length = 1290
Score = 910 bits (2352), Expect = 0.0
Identities = 569/1297 (43%), Positives = 743/1297 (57%), Gaps = 141/1297 (10%)
Query: 9 PSPSNPTKEPVEPQPSQVPLQEDVDMSS-GSSGHETNENCSTGRDSQGSDCDDSG--KEL 65
PSP P P P PS L +D D +S GSSG+E+N + S G + S SG K+
Sbjct: 26 PSPGPPQHRPC-PGPS---LADDTDANSNGSSGNESNGHESRGASQRSSHSSSSGNGKDS 81
Query: 66 GMLVEPPDAR----QSPD------TFSLMMAKSEH-NPSTSGCSSDQSSKVDTHKELIKT 114
+L ++ QSP +SL+ A SE NPSTSGCSS+QS++ T KEL+
Sbjct: 82 ALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDNPSTSGCSSEQSARARTQKELMTA 141
Query: 115 LKELKVHLPADKKAKGKASTLATLKYALRSVKQVKANEEYYQLLMSSEGHPCGADVPSYT 174
L+ELK+ LP +++ KG++ TLATL+YAL VKQV+AN+EYYQ EG PC D+ +YT
Sbjct: 142 LRELKLRLPPERRGKGRSGTLATLQYALACVKQVQANQEYYQQWSLEEGEPCSMDMSTYT 201
Query: 175 VEEMESVTSEHIVKNADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEFLAPH 234
+EE+E +TSE+ ++N D F+VAVS ++G+I+YIS+Q A + CKRD F +F E LAP
Sbjct: 202 LEELEHITSEYTLQNQDTFSVAVSFLTGRIVYISEQAAVLLRCKRDVFRGTRFSELLAPQ 261
Query: 235 DVGVFHSFTSPYKLPLWSMCSGADSFTQECMEEKSFFCRVSVRKSHENEIRYHPFRMTPY 294
DVGVF+ T+P +LP W + A S ++ +EKS FCR+ + RY PFR+TPY
Sbjct: 262 DVGVFYGSTAPSRLPTWGTGASAGSGLRDFTQEKSVFCRIRGGPDRDPGPRYQPFRLTPY 321
Query: 295 LVKVRDQQGAESQLCCLLLAERVHSGYEAPRIPPEKRIFTTTHTPNCLFQDVDERAVPLL 354
+ K+R GA +Q CCLL+AER+HSGYEAPRIPP+KRIFTT HTP+CLFQDVDERA PLL
Sbjct: 322 VTKIRVSDGAPAQPCCLLIAERIHSGYEAPRIPPDKRIFTTRHTPSCLFQDVDERAAPLL 381
Query: 355 GYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQSGGQPFDYSPIRFRARNGEYITLDTSW 414
GYLPQDL+ PVL+ LHP DRPLMLAIHKKILQ GQPFD+SPIRF ARNGEY+T+DTSW
Sbjct: 382 GYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVTMDTSW 441
Query: 415 SSFINPWSRKISFIIGRHKVRVGPLNEDVFAAHPCTEEKALHPSIQELTEQIHRLLLQPV 474
+ F++PWSRK++F++GRHKVR PLNEDVF + +L IQEL+EQIHRLLLQPV
Sbjct: 442 AGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPAPSPAPSLDTDIQELSEQIHRLLLQPV 501
Query: 475 PHSGSSGYGSLGSNGSHEHLMSQTSSSDSNGHE------DSRRRRAEICKNGNKTKNRSH 528
+G +G+ S L S SSSDSNG + + +ICK+ + K++
Sbjct: 502 HSPSPTGLCGVGAVTSPGPLHSPGSSSDSNGGDAEGPGPPAPVTFQQICKDVHLVKHQGQ 561
Query: 529 YSHESGEQKKKSVTEMQTNPPAEKKAVPAMEKD------SLGVS-----FPEELACKNQP 577
+ +S + + KA+P D S V PEE K
Sbjct: 562 QLFIESRARPQSRPRLPATGTFKAKALPCQSPDPELEAGSAPVQAPLALVPEEAERKEAS 621
Query: 578 TCSYQQISCLDSVIRYLESCNEAATLKRKCEFPANVPALRSSDKRKATVSPGPHAGEAEP 637
+CSYQQI+CLDS++RYLESCN +T KRKC ++ +SD + P + +P
Sbjct: 622 SCSYQQINCLDSILRYLESCNLPSTTKRKCASSSSYTTSSASDDDRQRTGPVSVGTKKDP 681
Query: 638 PSRVNSRTG--------VGTHLTSLALPGKAESVASLTSQCSYSSTIVHVGDKKP-QPEL 688
PS S G VG L+ LAL KAESV S+TSQCS+SSTIVHVGDKKP + ++
Sbjct: 682 PSAALSGEGATPRKEPVVGGTLSPLALANKAESVVSVTSQCSFSSTIVHVGDKKPPESDI 741
Query: 689 EMVEDA---ASGPESLDCLAGPALACGLSQEKEP--FKKLGLTKEVLAAHTQKEEQSFLQ 743
M+ED A GP PA + ++ + P ++ +GLTK VL+ HTQKEEQ+FL
Sbjct: 742 IMMEDLPGLAPGPAP-----SPAPSPTVAPDPAPDAYRPVGLTKAVLSLHTQKEEQAFLS 796
Query: 744 KFKEIRKLSIFQSHCHYYLQERSKGQPSERTAPGLRNTSGIDSPWKKTGKNRKLKSKRVK 803
+F+++ +L +G S TAP G + +SK +
Sbjct: 797 RFRDLGRL---------------RGLDSSSTAPSALGERGCHHGPAPPSRRHHCRSKAKR 841
Query: 804 PRDSSESTGSGGPVSARPPLVGLNATAWSPSDTSQSSCPAV-PFPAPVPAAYSLPVF-PA 861
R + P V P T + PA PFPA V Y LPVF P
Sbjct: 842 SRHHQNPRAEAPCYVSHPSPV--------PPSTPWPTPPATTPFPAVVQP-YPLPVFSPR 892
Query: 862 PGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPLA-PVMAFMLPSYSFPSGTPNL 920
G PPAP +V P FPAPL P++A +LP+Y FP TP+
Sbjct: 893 GGPQPLPPAPT-----------------SVPPAAFPAPLVTPMVALVLPNYLFP--TPS- 932
Query: 921 PQAFFPSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPL 980
S+P + + P S + P P P+ PP R PL
Sbjct: 933 ------------SYPYGALQTPAEGPPTPASHSPSPSLPALAPS----PPH---RPDSPL 973
Query: 981 FQSRSSSPLQLNLLQLEEAPEG-GTGAMGTTGATETAAVGADCKPGTSRDQQPKAPLTRD 1039
F SR SSPLQLNLLQLEE P G G G++ A P ++ +P+A L
Sbjct: 974 FNSRCSSPLQLNLLQLEELPRAEGAAVAGGPGSS------AGPPPPSAEAAEPEARLA-- 1025
Query: 1040 EPSDTQNSDALSTSSGLLNLLLNEDLCSASGSAASESLGSGSLGCDASPSGAG------- 1092
E +++ N DALS SS LL LLL ED S +GSAAS SLGSG S S G
Sbjct: 1026 EVTESSNQDALSGSSDLLELLLQEDSRSGTGSAASGSLGSGLGSGSGSGSHEGGSTSASI 1085
Query: 1093 --SSDTSHTSKYFGSIDSSENNHKAKMNTGMEESEHFIKCVLQDPIWLLMADADSSVMMT 1150
SS +SHTSKYFGSIDSSE A G E + IK VLQDPIWLLMA+AD VMMT
Sbjct: 1086 TRSSQSSHTSKYFGSIDSSEAEAGAARG-GAEPGDQVIKYVLQDPIWLLMANADQRVMMT 1144
Query: 1151 YQLPSRNLEAVLKEDREKLKLLQKLQPRFTESQKQELREVHQWMQTGGLPAAIDVAECVY 1210
YQ+PSR++ +VLK+DRE+L+ +QK QPRF+E Q++EL VH W++ G LP A+DV CV
Sbjct: 1145 YQVPSRDMTSVLKQDRERLRAMQKQQPRFSEDQRRELGAVHSWVRKGQLPRALDVMACVD 1204
Query: 1211 C--ENKEKGNICIPYEEDIPSLGLSEVSDTKEDENGS 1245
C ++ G+ P ++ LGL + + ++ S
Sbjct: 1205 CGSSTQDPGHPDDPLFSELDGLGLEPMEEGGGEQGSS 1241
>gi|8567388 period 3 [Homo sapiens]
Length = 1201
Score = 613 bits (1580), Expect = e-175
Identities = 446/1190 (37%), Positives = 621/1190 (52%), Gaps = 116/1190 (9%)
Query: 99 SDQSSKVDTHKELIKTLKELKVHLPADKKAKGKASTLATLKYALRSVKQVKANEEYYQLL 158
S+Q + +ELI ++E+K + P++++ K STL L YALR V V+AN E++Q+L
Sbjct: 43 SEQQDRNRVSEELIMVVQEMKKYFPSERR--NKPSTLDALNYALRCVHSVQANSEFFQIL 100
Query: 159 MSSEGHPCGADVPSYTVEEMESVTSEHIVKNADMFAVAVSLVSGKILYISDQVASIFHCK 218
S G P ADV Y++EE+ ++ SEH KN D F S +SG++++IS+Q A I + K
Sbjct: 101 -SQNGAP-QADVSMYSLEELATIASEHTSKNTDTFVAVFSFLSGRLVHISEQAALILNRK 158
Query: 219 RDAFSDAKFVEFLAPHDVGVFHSFTSPYKLPLWSMCSGADSFTQECMEEKSFFCRVSVRK 278
+D + + FV+ LAP D+ VF++ T+ +LP W+ + + EC K FFCR+ +
Sbjct: 159 KDVLASSHFVDLLAPQDMRVFYAHTARAQLPFWNNWTQRAA-RYECAPVKPFFCRIRGGE 217
Query: 279 SHENEIRYHPFRMTPYLVKVRD--QQGAESQLCCLLLAERVHSGYEAPRIPPEKRIFTTT 336
+ E + PFR+ PYL+ V Q ES+ CCL + E++HSGYEAPRIP KRIFTTT
Sbjct: 218 DRKQEKCHSPFRIIPYLIHVHHPAQPELESEPCCLTVVEKIHSGYEAPRIPVNKRIFTTT 277
Query: 337 HTPNCLFQDVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQSGGQP-FDY 395
HTP C+F +VDE+AVPLLGYLPQDLI T +L LHP DR LM+AIH+K+L+ G P F++
Sbjct: 278 HTPGCVFLEVDEKAVPLLGYLPQDLIGTSILSYLHPEDRSLMVAIHQKVLKYAGHPPFEH 337
Query: 396 SPIRFRARNGEYITLDTSWSSFINPWSRKISFIIGRHKVRVGPLNEDVFAAHPCTEEKAL 455
SPIRF +NG+YI LD+SWSSF+NPWSRKISFIIGRHKVR PLNEDVFA T+ K +
Sbjct: 338 SPIRFCTQNGDYIILDSSWSSFVNPWSRKISFIIGRHKVRTSPLNEDVFA----TKIKKM 393
Query: 456 HPS---IQELTEQIHRLLLQPVPHSGSSGYGSLGSNGSHEHLMSQTSSSDSNGH--EDSR 510
+ + I EL EQI++LLLQPV S SSGYGSLGS+GS E L+S SSS+++GH E+++
Sbjct: 394 NDNDKDITELQEQIYKLLLQPVHVSVSSGYGSLGSSGSQEQLVSIASSSEASGHRVEETK 453
Query: 511 RRRA---EICKNGNKTKNRSH--YSHESGEQKKKSVTEMQTNPPA--EKKAVPAME---K 560
+ ++ + NK KN Y + K VT +T P E K + K
Sbjct: 454 AEQMTLQQVYASVNKIKNLGQQLYIESMTKSSFKPVTGTRTEPNGGGECKTFTSFHQTLK 513
Query: 561 DSLGVSFPEELACKNQPTCSYQQISCLDSVIRYLESCNEAATLKRKCEFPANVPALRSSD 620
++ + P E ++ + SYQQI+C+DSVIRYL+S N A LKRKC N + S +
Sbjct: 514 NNSVYTEPCEDLRNDEHSPSYQQINCIDSVIRYLKSYNIPA-LKRKCISCTNTTSSSSEE 572
Query: 621 KRKATVSPGPHAGEAEPPSRVNSRTGVGTHLTSLALPGKAESVASLT--------SQCSY 672
++ + A +A ++ + T+ S+ G A + S SQC Y
Sbjct: 573 DKQNHKADDVQALQAGLQIPAIPKSEMPTNGRSIDTGGGAPQILSTAMLSLGSGISQCGY 632
Query: 673 SSTIVHVGDKKPQPELEMVEDAASGPESLDCLAGPALACGLSQEKEPFKKLGLTKEVLAA 732
SSTIVHV P PE P +L+ P + E FK +GLT VL+A
Sbjct: 633 SSTIVHV----PPPETARDATLFCEPWTLNMQPAPLTS-------EEFKHVGLTAAVLSA 681
Query: 733 HTQKEEQSFLQKFKEIRKLSIFQSHCHYYLQERSKGQPSERTAPGLRNTSGIDSPWKKTG 792
HTQKEEQ+++ KF+E I S YLQ+ S+ + G + S + G
Sbjct: 682 HTQKEEQNYVDKFRE----KILSSPYSSYLQQESRSKAKYSYFQGDSTSKQTRSAGCRKG 737
Query: 793 KNRKLKSKRVKPRDSSESTGSGGPVSARPPLVGLNATAWSPSDTSQ--SSCPAVPFPAPV 850
K+++ K P SS +TGSG A NA PS S +S P P A V
Sbjct: 738 KHKRKKLPE-PPDSSSSNTGSGPRRGAHQ-----NAQPCCPSAASSPHTSSPTFPPAAMV 791
Query: 851 P--AAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQP-PPFPAP-LAPVMAF 906
P A Y +P FP P + P A T P L +QP P FP P L M
Sbjct: 792 PSQAPYLVPAFPLPAATS-PGREYAAPGTAPEGLHGLPLSEGLQPYPAFPFPYLDTFMTV 850
Query: 907 MLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSRTS--IPRQPCACPA 964
LP P P L +F P P L + +SA P S S + P
Sbjct: 851 FLPD---PPVCPLLSPSFLPC-------PFLGATASSAISPSMSSAMSPTLDPPPSVTSQ 900
Query: 965 TRATPPSAMGRASPPLFQSRSSSPLQLNLLQLE--------------EAPEGGTGAMGTT 1010
R P SRSSSPLQLNLLQ E P+ G
Sbjct: 901 RREEEKWEAQSEGHPFITSRSSSPLQLNLLQEEMPRPSESPDQMRRNTCPQTEYCVTGNN 960
Query: 1011 GATETAAVGADCKPGTSRDQQPKAPL-----TRDEPSDTQN---SDALSTSS-------- 1054
G+ + A G+ + P P T P + + ALST S
Sbjct: 961 GSESSPATTGALSTGSPPRENPSHPTASALSTGSPPMKNPSHPTASALSTGSPPMKNPSH 1020
Query: 1055 ---GLLNLLLNEDLCSASGSAASESLGSGSLGCDASPSGAGS--SDTSHTSKYF-GSIDS 1108
L++ L + +A S GS SPS GS S +S +S Y S+ S
Sbjct: 1021 PTASTLSMGLPPSRTPSHPTATVLSTGSPP---SESPSRTGSAASGSSDSSIYLTSSVYS 1077
Query: 1109 SENNHKAKMNTGMEESEHFIKCVLQDPIWLLMADADSSVMMTYQLPSRNLEAVLKEDREK 1168
S+ + + + +++ E F V ++PIW ++ ++MTYQ+P R E VLKED EK
Sbjct: 1078 SKISQNGQQSQDVQKKETFPN-VAEEPIWRMIRQTPERILMTYQVPERVKEVVLKEDLEK 1136
Query: 1169 LKLLQKLQPRFTESQKQELREVHQWMQTGGLPAAIDVAECVYCENKEKGN 1218
L+ +++ QP+F+ QK+EL +V+ W+Q+ + ID+ CV CEN++ +
Sbjct: 1137 LESMRQQQPQFSHGQKEELAKVYNWIQSQTVTQEIDIQACVTCENEDSAD 1186
>gi|31745180 aryl hydrocarbon receptor nuclear translocator-like 2
[Homo sapiens]
Length = 636
Score = 109 bits (273), Expect = 1e-23
Identities = 118/504 (23%), Positives = 208/504 (41%), Gaps = 70/504 (13%)
Query: 51 RDSQGSDCDDSGKELGMLVEPPDARQSPDTFSLMMAKSEHNPSTSGCSSDQSSKVDTHKE 110
R +GSD D S + G++ E + S + + +++ ++SG S+V+ +
Sbjct: 50 RKRKGSDSDPS--QSGIMTEKVVEKLSQNPLTYLLSTRIEISASSG------SRVEDGEH 101
Query: 111 LIKTLKELKVHLPADKKAKGKASTLATLKYAL--------RSVKQVKANEEYYQLLMSSE 162
+K + H +K+ + K + L A+ R + ++ Q L S +
Sbjct: 102 QVKMKAFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLRSLK 161
Query: 163 GHPCGADVPSYTVEEMESVTSEHIV-KNADMFAVAVSLVSGKILYISDQVASIFHCKRDA 221
G +Y ++ H++ K A+ F V GKIL++S V+ I + + +
Sbjct: 162 GLTNSYVGSNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQAS 221
Query: 222 FSDAKFVEFLAPHDVGVFHSFTSPYKLPLWSMCSGADSFTQECME------------EKS 269
+ +FL P DV S + + A + Q +S
Sbjct: 222 LTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRS 281
Query: 270 FFCRV-----SVRKSH--------ENEIRYHPFRMTPYL----------VKVRDQQGAES 306
FFCR+ SV++ H + +++ T YL + R+ + S
Sbjct: 282 FFCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYLRSWPPNIVGMEEERNSKKDNS 341
Query: 307 QLCCLLLAERVHSGYEAPRIPPEKRI----FTTTHTPNCLFQDVDERAVPLLGYLPQDLI 362
CL+ R+ Y P+ E + F T N F VD+RA +LGYLPQ+L+
Sbjct: 342 NFTCLVAIGRLQP-YIVPQNSGEINVKPTEFITRFAVNGKFVYVDQRATAILGYLPQELL 400
Query: 363 ETPVLVQLHPSDRPLMLAIHKKILQSGGQPFDYSPIRFRARNGEYITLDTSWSSFINPWS 422
T H D + HK +LQS + S +FRA++G ++TL + W SF NPW+
Sbjct: 401 GTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDS-YKFRAKDGSFVTLKSQWFSFTNPWT 459
Query: 423 RKISFIIGRHKVRVGPLNEDVFAAHPCTEEKALHPSIQELTEQIHRLLLQPVPHSGSS-- 480
+++ +I+ + + +G H E + P + +E+ R VP +
Sbjct: 460 KELEYIVSVNTLVLG---------HSEPGEASFLPCSSQSSEESSRQSCMSVPGMSTGTV 510
Query: 481 -GYGSLGSNGSHEHLMSQTSSSDS 503
G GS+G++ ++E L Q S S
Sbjct: 511 LGAGSIGTDIANEILDLQRLQSSS 534
>gi|71852580 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 89.0 bits (219), Expect = 3e-17
Identities = 96/409 (23%), Positives = 170/409 (41%), Gaps = 70/409 (17%)
Query: 91 NPSTSGCSSDQSSKVDT-------------HKELIKTLKELKVHLPADKKAKGK------ 131
N G S+D +DT H+ IK +E H +K+ + K
Sbjct: 36 NRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNARE--AHSQIEKRRRDKMNSFID 93
Query: 132 --ASTLATLKYALRSVKQVKANEEYYQLLMSSEGHPCGADVPSYTVEEMESVTSEHIV-K 188
AS + T R + ++ Q + + G +Y + +H++ +
Sbjct: 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
Query: 189 NADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEFLAPHDVG-----VFHSFT 243
AD F V GKIL++S+ V I + ++ ++L P D+ + S T
Sbjct: 154 AADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Query: 244 SPYK--------LPLWS--------MCSGAD-SF--TQEC------MEEKSFFCRVSVRK 278
+P + LP+ + +CSGA SF +C +E+K F S +K
Sbjct: 214 APRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK 273
Query: 279 SHENEIRYH---------PFRMTPYLVKVRDQQGAESQLCCLLLAERVHSGYEAPRIPPE 329
++ H P +M D +G L CL+ R+HS + E
Sbjct: 274 DRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN--LSCLVAIGRLHSHVVPQPVNGE 331
Query: 330 KRI----FTTTHTPNCLFQDVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKI 385
R+ + + H + F VD+RA +L YLPQ+L+ T H D + H+++
Sbjct: 332 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQV 391
Query: 386 LQSGGQPFDYSPIRFRARNGEYITLDTSWSSFINPWSRKISFIIGRHKV 434
LQ+ + + +F+ ++G +ITL + W SF+NPW++++ +I+ + V
Sbjct: 392 LQTR-EKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTV 439
>gi|42716311 aryl hydrocarbon receptor nuclear translocator-like
isoform a [Homo sapiens]
Length = 625
Score = 89.0 bits (219), Expect = 3e-17
Identities = 96/409 (23%), Positives = 170/409 (41%), Gaps = 70/409 (17%)
Query: 91 NPSTSGCSSDQSSKVDT-------------HKELIKTLKELKVHLPADKKAKGK------ 131
N G S+D +DT H+ IK +E H +K+ + K
Sbjct: 36 NRKRKGSSTDYQESMDTDKDDPHGRLEYTEHQGRIKNARE--AHSQIEKRRRDKMNSFID 93
Query: 132 --ASTLATLKYALRSVKQVKANEEYYQLLMSSEGHPCGADVPSYTVEEMESVTSEHIV-K 188
AS + T R + ++ Q + + G +Y + +H++ +
Sbjct: 94 ELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILR 153
Query: 189 NADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEFLAPHDVG-----VFHSFT 243
AD F V GKIL++S+ V I + ++ ++L P D+ + S T
Sbjct: 154 AADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDT 213
Query: 244 SPYK--------LPLWS--------MCSGAD-SF--TQEC------MEEKSFFCRVSVRK 278
+P + LP+ + +CSGA SF +C +E+K F S +K
Sbjct: 214 APRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKK 273
Query: 279 SHENEIRYH---------PFRMTPYLVKVRDQQGAESQLCCLLLAERVHSGYEAPRIPPE 329
++ H P +M D +G L CL+ R+HS + E
Sbjct: 274 DRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN--LSCLVAIGRLHSHVVPQPVNGE 331
Query: 330 KRI----FTTTHTPNCLFQDVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKI 385
R+ + + H + F VD+RA +L YLPQ+L+ T H D + H+++
Sbjct: 332 IRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQV 391
Query: 386 LQSGGQPFDYSPIRFRARNGEYITLDTSWSSFINPWSRKISFIIGRHKV 434
LQ+ + + +F+ ++G +ITL + W SF+NPW++++ +I+ + V
Sbjct: 392 LQTR-EKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTV 439
>gi|71852582 aryl hydrocarbon receptor nuclear translocator-like
isoform b [Homo sapiens]
Length = 582
Score = 87.4 bits (215), Expect = 8e-17
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 46/292 (15%)
Query: 186 IVKNADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEFLAPHDVG-----VFH 240
I++ AD F V GKIL++S+ V I + ++ ++L P D+ +
Sbjct: 108 ILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSS 167
Query: 241 SFTSPYK--------LPLWS--------MCSGAD-SF--TQEC------MEEKSFFCRVS 275
S T+P + LP+ + +CSGA SF +C +E+K F S
Sbjct: 168 SDTAPRERLIDAKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCS 227
Query: 276 VRKSHENEIRYH---------PFRMTPYLVKVRDQQGAESQLCCLLLAERVHSGYEAPRI 326
+K ++ H P +M D +G L CL+ R+HS +
Sbjct: 228 KKKDRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCN--LSCLVAIGRLHSHVVPQPV 285
Query: 327 PPEKRI----FTTTHTPNCLFQDVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIH 382
E R+ + + H + F VD+RA +L YLPQ+L+ T H D + H
Sbjct: 286 NGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECH 345
Query: 383 KKILQSGGQPFDYSPIRFRARNGEYITLDTSWSSFINPWSRKISFIIGRHKV 434
+++LQ+ + + +F+ ++G +ITL + W SF+NPW++++ +I+ + V
Sbjct: 346 RQVLQTR-EKITTNCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTV 396
>gi|4502231 aryl hydrocarbon receptor nuclear translocator isoform 1
[Homo sapiens]
Length = 789
Score = 73.2 bits (178), Expect = 1e-12
Identities = 88/428 (20%), Positives = 167/428 (39%), Gaps = 68/428 (15%)
Query: 55 GSDCDDSGKELGMLVEPPDARQSPDTFSLMMAKSEHNPSTSG-CSSDQSSKVDTHK--EL 111
G D DD G+ + D + S D + E + + + + S+++ + ++
Sbjct: 46 GLDFDDDGEGNSKFLRCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIERRRRNKM 105
Query: 112 IKTLKELKVHLPADKKAKGKASTLATLKYALRSVKQVKANEEYYQLLMSSEGHPCGADVP 171
+ EL +P K L L+ A+ +K ++ + G+ P
Sbjct: 106 TAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRG---------TGNTSTDGSYKP 156
Query: 172 SY-TVEEMESVTSEHIVKNADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEF 230
S+ T +E++ + I++ AD F VS +G+++Y+SD V + + + + + +
Sbjct: 157 SFLTDQELKHL----ILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQ 212
Query: 231 LAPHDVGVFHSFTSPYKLPLWSMC----------SGADSFTQECM-EEKSFFCRVSVRKS 279
+ P DV S + L G S + CM +SF CR+ S
Sbjct: 213 VHPDDVDKLREQLSTSENALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMRCGSS 272
Query: 280 HENEIRYHPFRMT---------------PYLVKVR------------------DQQGAES 306
+ + + P+ V V D + +
Sbjct: 273 SVDPVSVNRLSFVRNRCRNGLGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQG 332
Query: 307 QLCCLLLAERVHSGYEAPRIPPEKRI-----FTTTHTPNCLFQDVDERAVPLLGYLPQDL 361
CL+ R+ +P + F + H +F VD R V +GY PQ+L
Sbjct: 333 SKFCLVAIGRLQVT-SSPNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVGYQPQEL 391
Query: 362 IETPVLVQLHPSDRPLMLAIHKKILQSGGQPFDYSPIRFRARNGEYITLDTSWSSFINPW 421
+ ++ HP D+ L+ +++++ GQ RFR++N E++ + TS +F NP+
Sbjct: 392 LGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVM-FRFRSKNQEWLWMRTSSFTFQNPY 450
Query: 422 SRKISFII 429
S +I +II
Sbjct: 451 SDEIEYII 458
>gi|68303555 aryl hydrocarbon receptor nuclear translocator 2 [Homo
sapiens]
Length = 717
Score = 72.4 bits (176), Expect = 3e-12
Identities = 83/394 (21%), Positives = 152/394 (38%), Gaps = 69/394 (17%)
Query: 89 EHNPSTSGCSSDQSSKVDTHK--ELIKTLKELKVHLPADKKAKGKASTLATLKYALRSVK 146
E S S + S+++ + ++ + + EL +P K L L+ A+ +K
Sbjct: 55 EDGEGPSKFSRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMK 114
Query: 147 QVKANEEYYQLLMSSEGHPCGADVPSYTVEEMESVTSEHIVKNADMFAVAVSLVSGKILY 206
++ + GA PS+ E+ I++ AD F V+ +G+++Y
Sbjct: 115 SMRG---------TGNKSTDGAYKPSFLTEQE---LKHLILEAADGFLFVVAAETGRVIY 162
Query: 207 ISDQVASIFHCKRDAFSDAKFVEFLAPHDVGVFHSFTSPYKLPLWSMC----------SG 256
+SD V + + + + + E + P DV + + G
Sbjct: 163 VSDSVTPVLNQPQSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEG 222
Query: 257 ADSFTQECM-EEKSFFCRV----------------SVRKSHEN--------EIRYHPFRM 291
S + CM +SF CR+ ++RK N E +Y
Sbjct: 223 QQSSMRMCMGSRRSFICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHC 282
Query: 292 TPYL---------VKVRDQQGAESQLCCLLLAERVH-------SGYEAPRIPPEKRIFTT 335
T Y+ + D + CL+ R+ +P E F +
Sbjct: 283 TGYIKAWPPAGMTIPEEDADVGQGSKYCLVAIGRLQVTSSPVCMDMNGMSVPTE---FLS 339
Query: 336 THTPNCLFQDVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQSGGQPFDY 395
H + + VD R + ++GY PQDL+ +L HP D+ + +++++ GQ
Sbjct: 340 RHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSV 399
Query: 396 SPIRFRARNGEYITLDTSWSSFINPWSRKISFII 429
RFR +N E++ + TS +F NP+S +I +II
Sbjct: 400 M-YRFRTKNREWMLIRTSSFTFQNPYSDEIEYII 432
>gi|30795242 aryl hydrocarbon receptor nuclear translocator isoform
3 [Homo sapiens]
Length = 774
Score = 69.3 bits (168), Expect = 2e-11
Identities = 89/427 (20%), Positives = 164/427 (38%), Gaps = 81/427 (18%)
Query: 55 GSDCDDSGKELGMLVEPPDARQSPDTFSLMMAKSEHNPSTSGCSSDQSSKVDTHK--ELI 112
G D DD G+ + D + S D A+ H S+++ + ++
Sbjct: 46 GLDFDDDGEGNSKFLRCDDDQMSND--KERFARENH------------SEIERRRRNKMT 91
Query: 113 KTLKELKVHLPADKKAKGKASTLATLKYALRSVKQVKANEEYYQLLMSSEGHPCGADVPS 172
+ EL +P K L L+ A+ +K ++ + G+ PS
Sbjct: 92 AYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRG---------TGNTSTDGSYKPS 142
Query: 173 Y-TVEEMESVTSEHIVKNADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEFL 231
+ T +E++ + I++ AD F VS +G+++Y+SD V + + + + + + +
Sbjct: 143 FLTDQELKHL----ILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQV 198
Query: 232 APHDVGVFHSFTSPYKLPLWSMC----------SGADSFTQECM-EEKSFFCRVSVRKSH 280
P DV S + L G S + CM +SF CR+ S
Sbjct: 199 HPDDVDKLREQLSTSENALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMRCGSSS 258
Query: 281 ENEIRYHPFRMT---------------PYLVKVR------------------DQQGAESQ 307
+ + + P+ V V D + +
Sbjct: 259 VDPVSVNRLSFVRNRCRNGLGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGS 318
Query: 308 LCCLLLAERVHSGYEAPRIPPEKRI-----FTTTHTPNCLFQDVDERAVPLLGYLPQDLI 362
CL+ R+ +P + F + H +F VD R V +GY PQ+L+
Sbjct: 319 KFCLVAIGRLQVT-SSPNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVGYQPQELL 377
Query: 363 ETPVLVQLHPSDRPLMLAIHKKILQSGGQPFDYSPIRFRARNGEYITLDTSWSSFINPWS 422
++ HP D+ L+ +++++ GQ RFR++N E++ + TS +F NP+S
Sbjct: 378 GKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVM-FRFRSKNQEWLWMRTSSFTFQNPYS 436
Query: 423 RKISFII 429
+I +II
Sbjct: 437 DEIEYII 443
>gi|22027471 neuronal PAS domain protein 2 [Homo sapiens]
Length = 824
Score = 67.0 bits (162), Expect = 1e-10
Identities = 98/422 (23%), Positives = 160/422 (37%), Gaps = 63/422 (14%)
Query: 115 LKELKVHLPADKKAKGKASTLATLKYALRSVKQVKANEEYYQLLMSSEGHPCGADVPSYT 174
+KEL LP + + K + L + L+ +V A E + + PS+
Sbjct: 29 IKELSSMLPGNTRKMDKTTVLEKVIGFLQKHNEVSAQTEICDIQQDWK--------PSFL 80
Query: 175 VEEMESVTSEHIVKNADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEFLAPH 234
E ++ +++ D F +AV+ G I+Y+SD + + D + FL
Sbjct: 81 SNEE---FTQLMLEALDGFIIAVT-TDGSIIYVSDSITPLLGHLPSDVMDQNLLNFLPEQ 136
Query: 235 DVGVFHSFTSPYKLPLWSMCSGADSFTQECMEEKS---FFCRVSVRKSHENEIRYHPFRM 291
+ + S + L DS + E ++ S F+C + + N + +
Sbjct: 137 EHSEVYKILSSHMLV-------TDSPSPEYLKSDSDLEFYCHLL--RGSLNPKEFPTYEY 187
Query: 292 TPYLVKVRDQQGAESQLC-----CLLLAERVHSGYEA----------PRIPPEKRI---- 332
++ R S C L RV G E P+ E I
Sbjct: 188 IKFVGNFRSYNNVPSPSCNGFDNTLSRPCRVPLGKEVCFIATVRLATPQFLKEMCIVDEP 247
Query: 333 ---FTTTHTPNCLFQDVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQSG 389
FT+ H+ F +D RA P++GYLP +++ T H D L+ H+ ++Q G
Sbjct: 248 LEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFG 307
Query: 390 -GQPFDYSPIRFRARNGEYITLDTSWSSFINPWSRKISFIIGRHK------VRVGPLNED 442
G+ Y RF + ++I L T + + W+ K FI+ H VRV E
Sbjct: 308 KGKSCCY---RFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQEL 364
Query: 443 VFAAHPCTEEKALHPSIQELTEQIHRLLLQPVPHSGSSGYGSLGSNGSHEHLMSQTSSSD 502
P +ALH S + L+P H + G+ G N SH S SS
Sbjct: 365 ALEDPP---SEALHSSALKDKGS----SLEPRQHFNTLDVGASGLNTSHSPSASSRSSHK 417
Query: 503 SN 504
S+
Sbjct: 418 SS 419
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 62.4 bits (150), Expect = 3e-09
Identities = 122/543 (22%), Positives = 192/543 (35%), Gaps = 74/543 (13%)
Query: 536 QKKKSVTEMQTNPPAEKKAVPAMEKDSLGVSFPEELACKNQPTCSYQQISCLDSVIRYLE 595
Q KS T+ PP +KK +E + + E +NQ + S S S IR ++
Sbjct: 86 QTIKSTTKRSPKPPNKKKTKKVIESEEI---TEEHSVSENQESSSSSSSSSSSSTIRKIK 142
Query: 596 SCNEAAT---LKRKCEFPANVPALRSSDKRKATVSPGPHAGEAEPPSRVNSRTGVGTHLT 652
S +A L++K + N ++ K +P P + N V T T
Sbjct: 143 SSKNSAANRELQKKLKVKDN-----KKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDT 197
Query: 653 SLALPGKAESVASLTS--QCSYSSTIVHVGDKKPQPELEMVEDAASGPESLDCLAGPALA 710
S K + +T+ + ++ D + L + ++ +
Sbjct: 198 STTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTST 257
Query: 711 CG----------LSQEKEPFKKLGLTKEVLAAHTQKEEQSFLQKFKEIRKLSIFQSHCHY 760
G S EK K L T +VLA T K E + + L+ +
Sbjct: 258 DGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETT-----TKGPALTTPKEPTPT 312
Query: 761 YLQERSKGQPSERTAPGLRNT-SGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGPVSA 819
+E + P E T +++ + P T K+ K P + E P +
Sbjct: 313 TPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP----APTTP 368
Query: 820 RPPLVGLNATAWSPSDTSQSSCPAVP-FPAPVPAAYSLPVFPAPGT--VAAPPAPPHASF 876
+ P T P+ T+ S P P PAP + P PAP T AP P +
Sbjct: 369 KEP---APTTTKEPAPTTTKSAPTTPKEPAP-----TTPKKPAPTTPKEPAPTTPKEPTP 420
Query: 877 TVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPT 936
T P P + A P PAP AP P P+ P+ P+ P+ PT
Sbjct: 421 TTPKEPAPTTKEPAPTTPKEPAPTAP-----------KKPAPTTPKEPAPTTPKEPA-PT 468
Query: 937 LTSEMASASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQL 996
T E PS T+ P++P P T + P+ +P +S ++P + +
Sbjct: 469 TTKE---------PSPTT-PKEP--APTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTT 516
Query: 997 EE-APEGGTGAMGTTGATETAAVGADCKPGTSRDQQP-----KAPLTRDEPSDTQNSDAL 1050
+E AP TT + P T ++ P AP T EP+ T +
Sbjct: 517 KEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETA 576
Query: 1051 STS 1053
T+
Sbjct: 577 PTT 579
Score = 53.9 bits (128), Expect = 9e-07
Identities = 113/534 (21%), Positives = 208/534 (38%), Gaps = 84/534 (15%)
Query: 569 EELACKNQPTCSYQ---QISCLDSVIRYLESCNEAATLKRKCEFPANVPALR-------S 618
+EL+CK + S++ + C +Y + C + + + P + P+ + +
Sbjct: 25 QELSCKGRCFESFERGRECDCDAQCKKYDKCCPDYESFCAEVHNPTSPPSSKKAPPPSGA 84
Query: 619 SDKRKATVSPGPHAGEAEPPSRVNSRTGVGTH-LTSLALPGKAESVASLTSQCSYSSTIV 677
S K+T P +PP++ ++ + + +T + + +S +S S SSTI
Sbjct: 85 SQTIKSTTKRSP-----KPPNKKKTKKVIESEEITEEHSVSENQESSSSSSSSSSSSTIR 139
Query: 678 HVGD-------------------------KKPQPELEMVEDAASGPESLDC-LAGPALAC 711
+ KKP P+ +V++A SG ++ D + P +
Sbjct: 140 KIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTST 199
Query: 712 GLSQEKEPFKKLGLTKEV-----LAAHTQKEEQSFLQKFKEIRKLSIFQSHCHYYLQERS 766
+ K+ K + L ++ +++ L KE + ++ +++
Sbjct: 200 TQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKE----TTVETKETTTTNKQT 255
Query: 767 KGQPSERTAPGLRNTSGIDSPWKKTGKNRKLKSKRV-KPRDSSESTGSGGPVSARPPLVG 825
E+T + T I+ K + K+ SK + KP +E+T + GP P
Sbjct: 256 STDGKEKTTSA-KETQSIE---KTSAKDLAPTSKVLAKPTPKAETT-TKGPALTTPK--- 307
Query: 826 LNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTV-AAPPAPPHASFTVPAVPVD 884
T +P + + S+ P P P + +A + P PAP T +AP P + T P
Sbjct: 308 -EPTPTTPKEPA-STTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP-- 363
Query: 885 LQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASA 944
A P PAP P+ + P P+ P+ P+ P+ PT E A
Sbjct: 364 -----APTTPKEPAPTTT----KEPAPTTTKSAPTTPKEPAPTTPKKPA-PTTPKEPAPT 413
Query: 945 SQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRS-SSPLQLNLLQLEEAPEGG 1003
+ P+ P+ T+ P++P P T+ P+ +P + + ++P + +E
Sbjct: 414 T-PKEPTPTT-PKEP--APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 469
Query: 1004 TGAMGTTGATETAAVGADCKPGTSRDQQP----KAPLTRDEPSDTQNSDALSTS 1053
T T E A P T+++ P AP T EPS T + T+
Sbjct: 470 TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 523
Score = 39.3 bits (90), Expect = 0.024
Identities = 55/232 (23%), Positives = 79/232 (34%), Gaps = 48/232 (20%)
Query: 842 PAVPFPA-PVPAAYSLPVFPAPGTVAAP-------PAPPHASFTVPAVPVDLQHQFAVQP 893
P P P P AA + P PAP T P PAP T P P +P
Sbjct: 620 PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 679
Query: 894 PPF----PAP--LAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQP 947
P PAP LAP S + P P+ P+ P+ P+ T
Sbjct: 680 APTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTT----------- 728
Query: 948 EFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQLEEAPEGGTGAM 1007
P++P A + T P+ + +P + +P +L AP G
Sbjct: 729 --------PKEP-APTTPKGTAPTTLKEPAPT--TPKKPAPKEL-------APTTTKGPT 770
Query: 1008 GTTGATETAAVGADCKPGTSRDQQP-----KAPLTRDEPSDTQNSDALSTSS 1054
TT + P T ++ P AP T + P T + + T++
Sbjct: 771 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTT 822
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 60.5 bits (145), Expect = 1e-08
Identities = 78/294 (26%), Positives = 101/294 (34%), Gaps = 37/294 (12%)
Query: 767 KGQPSERTAPGLRNTSGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGPVSARPPLVGL 826
KG P+ + G P K G P ++ + GGP + P
Sbjct: 928 KGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPT 987
Query: 827 NATAWSPSDTSQSSCPAVPFP--APVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVD 884
A PS PA P P AP P A + P G+ AA P P AS T PA
Sbjct: 988 PPAATPPSPKGG---PATPSPKGAPTPPAVTPP--SPKGSPAATPFPKGAS-TPPA---- 1037
Query: 885 LQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTL----TSE 940
A P P +P A + P G P P A PS P+ P+L T
Sbjct: 1038 -----ATPPSPKGSPAATPL---------PKGAPTTPAATLPSPKGGPATPSLKGAPTPP 1083
Query: 941 MASASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQLEEAP 1000
A+ P+ T P+ PA ATPPS G + P + ++P +P
Sbjct: 1084 AATPPSPKGGPATPSPKGAPMPPA--ATPPSPKGGLATPPHKGAPTTP-----AATPPSP 1136
Query: 1001 EGGTGAMGTTGATETAAVGADCKPGTSRDQQPKAPLTRDEPSDTQNSDALSTSS 1054
+GG GA T A G PK T + L+T S
Sbjct: 1137 KGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPS 1190
Score = 50.8 bits (120), Expect = 8e-06
Identities = 80/320 (25%), Positives = 105/320 (32%), Gaps = 39/320 (12%)
Query: 767 KGQPSERTAP-GLRNTSGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGPVSARPPLVG 825
KG P+ P G T P K G P ++ + GGP + P
Sbjct: 1044 KGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAP 1103
Query: 826 LNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDL 885
+ A PS + P PAA P+P A P P A T A P
Sbjct: 1104 MPPAATPPSPKGGLATPPHKGAPTTPAATP----PSPKGGLATPPPKGAPTTPAATPPSP 1159
Query: 886 QHQFAVQPPPFPAPLAPVMAFMLPSYSF----PSGTPNLPQAFFPSQPQFPSHPT----L 937
+ A PPP AP P P P G P P A PS + P+
Sbjct: 1160 KGGLAT-PPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP 1218
Query: 938 TSEMASASQPEFPSRTSIPRQPCACPATRATPPSAMG--------------RASPPLFQS 983
T+ A+ P+ T P+ PA ATPPS G A+PP +
Sbjct: 1219 TTPAATPPSPKGGLATPSPKGAPTTPA--ATPPSPKGGPATPPPKGAPTPPAATPPSLKG 1276
Query: 984 RSSSPLQLN----LLQLEEAPEGGTGAMGTTGATETAAVGADCKPGTSRDQQPK-AP--- 1035
++P + +P+GG GA A G+ PK AP
Sbjct: 1277 GLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPP 1336
Query: 1036 -LTRDEPSDTQNSDALSTSS 1054
+T P T A + SS
Sbjct: 1337 AVTPPSPKGTPTLPATTPSS 1356
Score = 46.6 bits (109), Expect = 1e-04
Identities = 64/249 (25%), Positives = 86/249 (34%), Gaps = 33/249 (13%)
Query: 814 GGPVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPA--------AYSLP-------- 857
G P + + P +T S +PFP PA A S+
Sbjct: 863 GAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKAR 922
Query: 858 VFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPP---PFPAPLAPVMAFMLPSYSFP 914
PAP + A P+P A A P + A P P P P P+ P
Sbjct: 923 ATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSP 982
Query: 915 SGTPNLPQAFFPSQPQFPSHPT-----LTSEMASASQPEFPSRTSIPRQPCACPATRATP 969
G P P A PS P+ P+ + S P+ T P+ PA ATP
Sbjct: 983 KGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPA--ATP 1040
Query: 970 PSAMGR-ASPPLFQSRSSSPLQLNLLQLEEAPEGGTGAMGTTGA-TETAAVGADCKPGTS 1027
PS G A+ PL + ++P +P+GG GA T AA K G +
Sbjct: 1041 PSPKGSPAATPLPKGAPTTP-----AATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPA 1095
Query: 1028 RDQQPKAPL 1036
AP+
Sbjct: 1096 TPSPKGAPM 1104
Score = 46.6 bits (109), Expect = 1e-04
Identities = 60/234 (25%), Positives = 79/234 (33%), Gaps = 29/234 (12%)
Query: 832 SPSDTSQSSCPAVPFPAP-----VPAAYSLPVFPA---PGTVAAPPAPPHASFTVP--AV 881
+PS + PA P+P P+ P PA P P PP P A
Sbjct: 1211 TPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAAT 1270
Query: 882 PVDLQHQFAVQP---PPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFP-SHPTL 937
P L+ A P P PA + P P+ S P G P P A PS P + P
Sbjct: 1271 PPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK 1330
Query: 938 TSEMASASQPEFPSRTSIPRQPCACPATR---ATPPSAMGRASPPLFQSRSSSPLQLNLL 994
+ A P PS P P P+++ TP S G P S P
Sbjct: 1331 GAPTPPAVTP--PSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGP-----A 1383
Query: 995 QLEEAPEGGTGAMGTTGATETAAVGADCKPGTSRDQQPKAPLTRDEPSDTQNSD 1048
+P+ G G + AV S + P P+TR+ + D
Sbjct: 1384 MTPPSPKRGPAIPSPKGDPTSPAV-----IPLSPKKAPATPVTREGAATPSKGD 1432
Score = 44.3 bits (103), Expect = 7e-04
Identities = 67/290 (23%), Positives = 100/290 (34%), Gaps = 34/290 (11%)
Query: 816 PVSARPPLVGLNATAWSPSDTSQSSCP--AVPFPAPVPAAYSLPVFPAPGTVAAPPAPPH 873
P PP AT+ SP + P A PA +P+ S PA + P P
Sbjct: 1473 PSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPS--SPKEVPATPSSRRDPIAPT 1530
Query: 874 ASFTVPAVPVDLQHQFAVQPPPF--------PAPLAPVMAFMLPSYSFPSGTPNLPQAFF 925
A+ P L + A+ PP PA P A PS S P + + +
Sbjct: 1531 ATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTY 1590
Query: 926 PSQPQFPSHPTLTSEMASASQPEFPSRTSI----PRQPCACPATRATPPSAMGRASPPLF 981
P P + + S S E P+ ++ P + A PA + TP S +P
Sbjct: 1591 KGAPS-PKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSP--PVTPSSL 1647
Query: 982 QSRSSSPLQLNLLQLEEAPEGGTGAMGTTGAT------------ETAAVGADCK--PGTS 1027
+ +SP + P+ G G T T + A + P T
Sbjct: 1648 KDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTK 1707
Query: 1028 RDQQPKAPLTRDEPSDTQNSDALSTSSGLLNLLLNEDLC-SASGSAASES 1076
+ P+ D + + LST + L + +D +A G AS S
Sbjct: 1708 KSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHS 1757
Score = 39.3 bits (90), Expect = 0.024
Identities = 55/225 (24%), Positives = 77/225 (34%), Gaps = 32/225 (14%)
Query: 770 PSERTAPGLRNTSGIDSPWKKTGKNRK--------LKSKRVKPRDSSESTGSGGPVSARP 821
PS + +PG G +P T + K S + P S G P +
Sbjct: 1318 PSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPS 1377
Query: 822 PLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYS-LPVFP-----APGTVAAPPAPPHAS 875
G T SP PA+P P P + + +P+ P P T P
Sbjct: 1378 HKGGPAMTPPSPKRG-----PAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGD 1432
Query: 876 FTVPAV-PVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSH 934
T PAV PV L+ PA AP PS G P LP PS + P+
Sbjct: 1433 LTPPAVTPVSLKKA--------PATSAPKGGPATPS---SKGDPTLPAVTPPSPKEPPAP 1481
Query: 935 PTLTSEMASASQPEFPSRTSIPRQPCACPAT-RATPPSAMGRASP 978
+ + + P P+ P P P++ + P + R P
Sbjct: 1482 KQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDP 1526
Score = 38.1 bits (87), Expect = 0.053
Identities = 55/224 (24%), Positives = 85/224 (37%), Gaps = 39/224 (17%)
Query: 824 VGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPPAP---PHASF---- 876
+ + A P T C P P+ AA FP+P T+A+ P P +S
Sbjct: 32 LSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTAL 91
Query: 877 ---TVPAVPVDLQHQFAVQPPPFPAPLA---PVMAFML---PSYSFPSGTPNLPQAFFPS 927
T P P L + + PP PA LA P++A L PS S P L
Sbjct: 92 PLGTAPEAPTFLPN--LIGPPISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQK 149
Query: 928 QPQFP-----SHPTL----TSEMASASQPEFPS--RTSIPRQPCACPATRATPPSAMGRA 976
FP S P++ + + + S P PS +T++ + P P+ G
Sbjct: 150 SSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVP------SEVVPNPKGTP 203
Query: 977 SPPLFQSRSSSPLQLNLLQLEEAPEGGTGAMGTTGATETAAVGA 1020
SPP S + + + + + G ++ T T T A+ +
Sbjct: 204 SPPCI----VSTVPYHCVTPMASIQSGVASLPQTTPTTTLAIAS 243
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 55.1 bits (131), Expect = 4e-07
Identities = 47/147 (31%), Positives = 53/147 (36%), Gaps = 18/147 (12%)
Query: 842 PAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPLA 901
P+VP APVP A LP GT+ PP P S T P P PPP P P
Sbjct: 565 PSVPSRAPVPPAPPLP--GDSGTIIPPPPAPGDSTTPPPPP----------PPPPPPPPL 612
Query: 902 PVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPCA 961
P + S P GT P P P L + S P T+IP P
Sbjct: 613 PGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPL 672
Query: 962 CPATRATPPSAMGRASPPLFQSRSSSP 988
+ R PP PPL S P
Sbjct: 673 PGSARIPPP------PPPLPGSAGIPP 693
Score = 51.6 bits (122), Expect = 5e-06
Identities = 47/161 (29%), Positives = 52/161 (32%), Gaps = 20/161 (12%)
Query: 810 STGSGGPVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPP 869
S S PV PPL G + T P S P P P P P P PG V
Sbjct: 566 SVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPP-----PPPPLPGGVCISS 620
Query: 870 APPHASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQP 929
P T + P L + PPP PL + PS S P GT P P
Sbjct: 621 PPSLPGGTAISPPPPLSGDATIPPPP---PLPEGVGIPSPS-SLPGGTAIPPPPPLPGSA 676
Query: 930 QFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPP 970
+ P P P P IP P P PP
Sbjct: 677 RIPPPP-----------PPLPGSAGIPPPPPPLPGEAGMPP 706
Score = 48.1 bits (113), Expect = 5e-05
Identities = 51/189 (26%), Positives = 64/189 (33%), Gaps = 48/189 (25%)
Query: 804 PRDSSESTGSGGPVSARPPLVG---LNATAWSPSDTSQSSCP------AVPFPAPVPAAY 854
P DS+ P PPL G +++ P T+ S P +P P P+P
Sbjct: 593 PGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGV 652
Query: 855 SLPVFPA-PGTVAAPPAPP-HASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYS 912
+P + PG A PP PP S +P P L + PPP P P
Sbjct: 653 GIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLP------------- 699
Query: 913 FPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPPSA 972
G +P P P P P + P FP IP PP
Sbjct: 700 ---GEAGMP----PPPPPLPGGPGI------PPPPPFPGGPGIP-----------PPPPG 735
Query: 973 MGRASPPLF 981
MG PP F
Sbjct: 736 MGMPPPPPF 744
Score = 48.1 bits (113), Expect = 5e-05
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 10/138 (7%)
Query: 807 SSESTGSGGPVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPA-PGTV 865
S S G +S PPL G +AT P + +P P+ +P ++P P PG+
Sbjct: 620 SPPSLPGGTAISPPPPLSG-DATIPPPPPLPEGV--GIPSPSSLPGGTAIPPPPPLPGSA 676
Query: 866 AAPPAPPH--ASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQA 923
PP PP S +P P L + + PPP P P P + P P P P
Sbjct: 677 RIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGM 736
Query: 924 FFPSQPQF----PSHPTL 937
P P F P+ P L
Sbjct: 737 GMPPPPPFGFGVPAAPVL 754
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 55.1 bits (131), Expect = 4e-07
Identities = 47/147 (31%), Positives = 53/147 (36%), Gaps = 18/147 (12%)
Query: 842 PAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPLA 901
P+VP APVP A LP GT+ PP P S T P P PPP P P
Sbjct: 574 PSVPSRAPVPPAPPLP--GDSGTIIPPPPAPGDSTTPPPPP----------PPPPPPPPL 621
Query: 902 PVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPCA 961
P + S P GT P P P L + S P T+IP P
Sbjct: 622 PGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPL 681
Query: 962 CPATRATPPSAMGRASPPLFQSRSSSP 988
+ R PP PPL S P
Sbjct: 682 PGSARIPPP------PPPLPGSAGIPP 702
Score = 51.6 bits (122), Expect = 5e-06
Identities = 47/161 (29%), Positives = 52/161 (32%), Gaps = 20/161 (12%)
Query: 810 STGSGGPVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPP 869
S S PV PPL G + T P S P P P P P P PG V
Sbjct: 575 SVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPP-----PPPPLPGGVCISS 629
Query: 870 APPHASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQP 929
P T + P L + PPP PL + PS S P GT P P
Sbjct: 630 PPSLPGGTAISPPPPLSGDATIPPPP---PLPEGVGIPSPS-SLPGGTAIPPPPPLPGSA 685
Query: 930 QFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPP 970
+ P P P P IP P P PP
Sbjct: 686 RIPPPP-----------PPLPGSAGIPPPPPPLPGEAGMPP 715
Score = 48.1 bits (113), Expect = 5e-05
Identities = 51/189 (26%), Positives = 64/189 (33%), Gaps = 48/189 (25%)
Query: 804 PRDSSESTGSGGPVSARPPLVG---LNATAWSPSDTSQSSCP------AVPFPAPVPAAY 854
P DS+ P PPL G +++ P T+ S P +P P P+P
Sbjct: 602 PGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLPEGV 661
Query: 855 SLPVFPA-PGTVAAPPAPP-HASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYS 912
+P + PG A PP PP S +P P L + PPP P P
Sbjct: 662 GIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLP------------- 708
Query: 913 FPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPPSA 972
G +P P P P P + P FP IP PP
Sbjct: 709 ---GEAGMP----PPPPPLPGGPGI------PPPPPFPGGPGIP-----------PPPPG 744
Query: 973 MGRASPPLF 981
MG PP F
Sbjct: 745 MGMPPPPPF 753
Score = 48.1 bits (113), Expect = 5e-05
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 10/138 (7%)
Query: 807 SSESTGSGGPVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPA-PGTV 865
S S G +S PPL G +AT P + +P P+ +P ++P P PG+
Sbjct: 629 SPPSLPGGTAISPPPPLSG-DATIPPPPPLPEGV--GIPSPSSLPGGTAIPPPPPLPGSA 685
Query: 866 AAPPAPPH--ASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQA 923
PP PP S +P P L + + PPP P P P + P P P P
Sbjct: 686 RIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGM 745
Query: 924 FFPSQPQF----PSHPTL 937
P P F P+ P L
Sbjct: 746 GMPPPPPFGFGVPAAPVL 763
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 855
Score = 55.1 bits (131), Expect = 4e-07
Identities = 80/312 (25%), Positives = 107/312 (34%), Gaps = 53/312 (16%)
Query: 832 SPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAV 891
SPS T S P P+ S P P A PP P A + A P+ Q A
Sbjct: 461 SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPP--PQAPPPLAAPPL----QLAK 514
Query: 892 QPPPFPAPLA--PVMAFMLPSYSFPSGTPNLPQAFFPSQP-----------------QFP 932
PP P LA P+ A P SFP P P A P P Q P
Sbjct: 515 PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVP 574
Query: 933 SHPTLTSEMASASQPEFPS-RTSI-------------PRQPCACPATRATPPSAMGRASP 978
P + + + +P P TS+ P P P++ + P G +S
Sbjct: 575 PSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS- 633
Query: 979 PLFQSRSSSPLQLNLLQLEEAPEGGTGAM----GTTGATETAAVGADCKPGTSRDQQPKA 1034
S +S+P +L + PEGG A A AA P + P A
Sbjct: 634 ----SATSTPEELR--GYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGA 687
Query: 1035 PLTRDEPSDTQNSDALSTSSGLLNLLLNEDLCSASGSAASESLGSGSLGCDASPSGAGSS 1094
PL + ++D L T + E A G+ S G A+ +GAG+S
Sbjct: 688 PLPWPPATGPGSADGLCT---IYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGAS 744
Query: 1095 DTSHTSKYFGSI 1106
S G +
Sbjct: 745 SRSPKQARLGEL 756
Score = 48.9 bits (115), Expect = 3e-05
Identities = 55/182 (30%), Positives = 71/182 (39%), Gaps = 21/182 (11%)
Query: 819 ARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFP---APGTVAAPPAPPHAS 875
A PP AT S T Q++ +P P P A P P A + APP+PP +
Sbjct: 359 ATPPS---QATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASP 415
Query: 876 FTVPAVPVDLQHQFA-----VQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQ-- 928
P Q A +Q P P P PV A +S P+ P P A PSQ
Sbjct: 416 PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA----PFSPPASPPVSPSATPPSQAP 471
Query: 929 PQFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRSSSP 988
P + P AS P PS T P+ P A PP + + P + ++ P
Sbjct: 472 PSLAAPPLQVPPSPPASPPMSPSATPPPQ----APPPLAAPPLQLAKPPPQAPPALATPP 527
Query: 989 LQ 990
LQ
Sbjct: 528 LQ 529
Score = 47.4 bits (111), Expect = 9e-05
Identities = 67/220 (30%), Positives = 86/220 (39%), Gaps = 37/220 (16%)
Query: 818 SARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFT 877
S PP L AT S S T Q + P +P P P+A P+ T+ +PPA P + T
Sbjct: 315 SQAPPT--LPATPHSSSLTCQLATP-LPLAPPSPSAP-----PSLQTLPSPPATPPSQAT 366
Query: 878 VPAVPVDLQ--HQFAVQPP----PFPAPLAPVMAFMLPSYSFPS--GTPNLPQAFFPSQP 929
LQ H F PP P P AP + P + PS +P L PS P
Sbjct: 367 TSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPS-P 425
Query: 930 QFPSHPTLTSEMASASQP-------EFPSRTSIPRQPCACPATRATPPSA--------MG 974
Q P+ + A S P F S P P A P ++A P A
Sbjct: 426 QAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP 485
Query: 975 RASPPLFQS-----RSSSPLQLNLLQLEEAPEGGTGAMGT 1009
ASPP+ S ++ PL LQL + P A+ T
Sbjct: 486 PASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT 525
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens]
Length = 816
Score = 55.1 bits (131), Expect = 4e-07
Identities = 80/312 (25%), Positives = 107/312 (34%), Gaps = 53/312 (16%)
Query: 832 SPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAV 891
SPS T S P P+ S P P A PP P A + A P+ Q A
Sbjct: 422 SPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPP--PQAPPPLAAPPL----QLAK 475
Query: 892 QPPPFPAPLA--PVMAFMLPSYSFPSGTPNLPQAFFPSQP-----------------QFP 932
PP P LA P+ A P SFP P P A P P Q P
Sbjct: 476 PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVP 535
Query: 933 SHPTLTSEMASASQPEFPS-RTSI-------------PRQPCACPATRATPPSAMGRASP 978
P + + + +P P TS+ P P P++ + P G +S
Sbjct: 536 PSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS- 594
Query: 979 PLFQSRSSSPLQLNLLQLEEAPEGGTGAM----GTTGATETAAVGADCKPGTSRDQQPKA 1034
S +S+P +L + PEGG A A AA P + P A
Sbjct: 595 ----SATSTPEELR--GYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGA 648
Query: 1035 PLTRDEPSDTQNSDALSTSSGLLNLLLNEDLCSASGSAASESLGSGSLGCDASPSGAGSS 1094
PL + ++D L T + E A G+ S G A+ +GAG+S
Sbjct: 649 PLPWPPATGPGSADGLCT---IYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGAS 705
Query: 1095 DTSHTSKYFGSI 1106
S G +
Sbjct: 706 SRSPKQARLGEL 717
Score = 48.9 bits (115), Expect = 3e-05
Identities = 55/182 (30%), Positives = 71/182 (39%), Gaps = 21/182 (11%)
Query: 819 ARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFP---APGTVAAPPAPPHAS 875
A PP AT S T Q++ +P P P A P P A + APP+PP +
Sbjct: 320 ATPPS---QATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASP 376
Query: 876 FTVPAVPVDLQHQFA-----VQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQ-- 928
P Q A +Q P P P PV A +S P+ P P A PSQ
Sbjct: 377 PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA----PFSPPASPPVSPSATPPSQAP 432
Query: 929 PQFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRSSSP 988
P + P AS P PS T P+ P A PP + + P + ++ P
Sbjct: 433 PSLAAPPLQVPPSPPASPPMSPSATPPPQ----APPPLAAPPLQLAKPPPQAPPALATPP 488
Query: 989 LQ 990
LQ
Sbjct: 489 LQ 490
Score = 46.2 bits (108), Expect = 2e-04
Identities = 67/224 (29%), Positives = 88/224 (39%), Gaps = 33/224 (14%)
Query: 815 GPVSARPPLVGLNATAWSPSDTSQSSCP-AVPFPAPVPAAYSLPVFPAPGTVAAPPAPPH 873
G + RPP V +P+ SS P A P P+ P+ S P P+ T+ +PPA P
Sbjct: 267 GLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSP-SAP--PSLQTLPSPPATPP 323
Query: 874 ASFTVPAVPVDLQ--HQFAVQPP----PFPAPLAPVMAFMLPSYSFPS--GTPNLPQAFF 925
+ T LQ H F PP P P AP + P + PS +P L
Sbjct: 324 SQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLAT 383
Query: 926 PSQPQFPSHPTLTSEMASASQP-------EFPSRTSIPRQPCACPATRATPPSA------ 972
PS PQ P+ + A S P F S P P A P ++A P A
Sbjct: 384 PS-PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQV 442
Query: 973 --MGRASPPLFQS-----RSSSPLQLNLLQLEEAPEGGTGAMGT 1009
ASPP+ S ++ PL LQL + P A+ T
Sbjct: 443 PPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALAT 486
>gi|4758010 clock [Homo sapiens]
Length = 846
Score = 54.3 bits (129), Expect = 7e-07
Identities = 68/343 (19%), Positives = 130/343 (37%), Gaps = 44/343 (12%)
Query: 115 LKELKVHLPADKKAKGKASTLATLKYALRSVKQVKANEEYYQLLMSSEGHPCGADVPSYT 174
+KEL LP + + K++ L LR K++ A + ++ + P +T
Sbjct: 54 IKELGSMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEI--RQDWKPTFLSNEEFT 111
Query: 175 VEEMESVTSEHIVKNADMFAVAVSLVSGKILYISDQVASIFHCKRDAFSDAKFVEFLAPH 234
+E++ D F +A+ + G I+Y+S+ V S+ D F+
Sbjct: 112 QLMLEAL---------DGFFLAI-MTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEG 161
Query: 235 DVGVFHSFTSPYKLPLWSMCSGADSFTQECMEEKSF--FCRVSVRKSHE----------- 281
+ + S + L +DS T E ++ K+ FC +R + +
Sbjct: 162 EHSEVYKILSTHLLE-------SDSLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVK 214
Query: 282 --------NEIRYHPFRMTPYLVKVRDQQGAESQLCCLLLAERVHSGY--EAPRIPPEKR 331
N + ++ + E ++C + + E +
Sbjct: 215 FIGNFKSLNSVSSSAHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNE 274
Query: 332 IFTTTHTPNCLFQDVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQSGGQ 391
FT+ H+ F +D RA P++GYLP +++ T H D + H+ ++Q G
Sbjct: 275 EFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKG 334
Query: 392 PFDYSPIRFRARNGEYITLDTSWSSFINPWSRKISFIIGRHKV 434
Y RF + ++I L T + + W+ + FI+ H V
Sbjct: 335 KSCY--YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTV 375
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens]
Length = 1124
Score = 54.3 bits (129), Expect = 7e-07
Identities = 87/345 (25%), Positives = 117/345 (33%), Gaps = 70/345 (20%)
Query: 816 PVSARPPL-VGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPA------------- 861
P A PPL V + A P S + P P P P P PA
Sbjct: 697 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPR 756
Query: 862 -PGTVAAPP--APPHASFTVPAVPVDLQHQFAVQPPPFPAPLA--PVMAFMLPSYSFPSG 916
P +AAPP PP ++P P+ A PP P LA P+ A P SFP
Sbjct: 757 VPPLLAAPPLQVPPSPPASLPMSPL------AKPPPQAPPALATPPLQALPSPPASFPGQ 810
Query: 917 TPNLPQAFFPSQP-----------------QFPSHPTLTSEMASASQPEFPS-RTSI--- 955
P P A P P Q P P + + + +P P TS+
Sbjct: 811 APFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP 870
Query: 956 ----------PRQPCACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQLEEAPEGGTG 1005
P P P++ + P G +S S +S+P +L + PEGG
Sbjct: 871 RLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS-----SATSTPEELR--GYDSGPEGGAA 923
Query: 1006 AM----GTTGATETAAVGADCKPGTSRDQQPKAPLTRDEPSDTQNSDALSTSSGLLNLLL 1061
A A AA P + P APL + ++D L T +
Sbjct: 924 ASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCT---IYETEG 980
Query: 1062 NEDLCSASGSAASESLGSGSLGCDASPSGAGSSDTSHTSKYFGSI 1106
E A G+ S G A+ +GAG+S S G +
Sbjct: 981 PESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGEL 1025
Score = 52.4 bits (124), Expect = 3e-06
Identities = 58/182 (31%), Positives = 71/182 (39%), Gaps = 31/182 (17%)
Query: 816 PVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHAS 875
P A PPL GL + SP T P P +LP + APP+PP +
Sbjct: 596 PALASPPLQGLPSPPLSPLATP---------PPQAPPXLALP------PLQAPPSPPASP 640
Query: 876 FTVPAVPVDLQHQFA-----VQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQ-- 928
P Q A +Q P P P PV A +S P+ P P A PSQ
Sbjct: 641 PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQA----PFSPPASPPVSPSATPPSQAP 696
Query: 929 PQFPSHPTLTSEMASASQPEFPSRTSIPR--QPCACPATRATPPSAMGRASPPLFQSRSS 986
P + P AS P PS T P+ P A P + PPS ASPP+ S +
Sbjct: 697 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQ-VPPSP--PASPPMSPSATP 753
Query: 987 SP 988
P
Sbjct: 754 PP 755
Score = 51.2 bits (121), Expect = 6e-06
Identities = 58/190 (30%), Positives = 74/190 (38%), Gaps = 21/190 (11%)
Query: 816 PVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPV---PAAYSLPVFPAPGTVAAPP--A 870
P A PPL TA +P T P P P P+ P+ + P P ++A PP A
Sbjct: 539 PSLAPPPL----QTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQA 594
Query: 871 PPH-ASFTVPAVPVDLQHQFAVQPPPFPAPLA--PVMAFMLPSYSFP-----SGTPNLPQ 922
PP AS + +P A PP P LA P+ A P S P + +P P
Sbjct: 595 PPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPN 654
Query: 923 AFFPSQPQFP-SHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPPSAM---GRASP 978
A Q P S P A S P P + P P + A PP + ASP
Sbjct: 655 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP 714
Query: 979 PLFQSRSSSP 988
P+ S + P
Sbjct: 715 PMSPSATPPP 724
Score = 43.9 bits (102), Expect = 0.001
Identities = 68/255 (26%), Positives = 89/255 (34%), Gaps = 30/255 (11%)
Query: 821 PPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHAS----- 875
PP + A P+ S P AP P+ + P+ P A+PP P A+
Sbjct: 668 PPSPPVQAPFSPPASPPVSPSATPPSQAP-PSLAAPPLQVPPSPPASPPMSPSATPPPQA 726
Query: 876 ---------FTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFP 926
P+ P + PPP PL +P S P+ P P A P
Sbjct: 727 PPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPP-SPPASLPMSPLAKPP 785
Query: 927 SQ--PQFPSHP--TLTSEMAS-ASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPLF 981
Q P + P L S AS Q F S+P P A P PP A + PL
Sbjct: 786 PQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATP-----PPQAPPVLAAPLL 840
Query: 982 QSRSSSPLQLNLLQLEEAPEGGTGAMGTTGATETAAVGADCKPGTSRDQQPKAPLTRDEP 1041
Q S P L P G +G T A+ P SR P + L+ +
Sbjct: 841 QVPPSPPASPTLQAPRRPPTPGPDT-SVSGPRLTLALAPGPPPPPSR--SPSSTLSGPDL 897
Query: 1042 SDTQNSDALSTSSGL 1056
+ +S A ST L
Sbjct: 898 AG-HSSSATSTPEEL 911
Score = 40.0 bits (92), Expect = 0.014
Identities = 77/311 (24%), Positives = 105/311 (33%), Gaps = 89/311 (28%)
Query: 815 GPVSARPPLV---------GLNATAWSPSDT-SQSSCPAVPFPAPVPAAYSLPVF----- 859
G + RPP V L + SP T S S A P P P AA LP
Sbjct: 276 GLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSP 335
Query: 860 ----------PAPG------TVAAPPAPPHA----SFTVPAV----------PVDLQHQF 889
P+P T+ +PPA P + S T P + P+ + H
Sbjct: 336 PLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSL 395
Query: 890 ---AVQPPPFPAPLAPVMA-------FMLPSYSFPSGTPNLPQAFF--PSQP-------- 929
++Q PP P L+ + A + ++SF + +P QA PS+P
Sbjct: 396 TSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSP 455
Query: 930 ------QFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQS 983
P+ P L + ++ A P T P Q + A+ + PPL
Sbjct: 456 PLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQ 515
Query: 984 RSSSPLQL-------------NLLQLEEAPEGGTGAMGTTGATETAAVGADCKPGTSRDQ 1030
S +P L NL L P A TT ET A C Q
Sbjct: 516 SSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPL-----Q 570
Query: 1031 QPKAPLTRDEP 1041
P +PLT P
Sbjct: 571 APPSPLTTPPP 581
Score = 37.4 bits (85), Expect = 0.091
Identities = 51/227 (22%), Positives = 81/227 (35%), Gaps = 14/227 (6%)
Query: 770 PSERTAPGLRNTSGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGP-VSARPPLVGLNA 828
P + P L+ I P T + + + +T G P + A + ++
Sbjct: 375 PPMQAPPSLQTIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSP 434
Query: 829 TAWSPSDTSQSSCPAVPFPAP-VPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQH 887
S TS S + P +P + A SLP P T +P P +S P+ +
Sbjct: 435 RQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSS------PLTIHP 488
Query: 888 QFAVQPPPFPAPLAPVMAFMLPSYSFPSGT--PNL--PQAFFPSQPQFPSHPTLTSEMAS 943
A+ +P AP+ + ++P S P+L P A + P + +
Sbjct: 489 LQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQT 548
Query: 944 ASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRSSSPLQ 990
AS P P PC P PPS + P S ++ P Q
Sbjct: 549 ASAPLTTPHLETP--PCPAPCPLQAPPSPLTTPPPETPSSIATPPPQ 593
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 53.9 bits (128), Expect = 9e-07
Identities = 117/532 (21%), Positives = 191/532 (35%), Gaps = 108/532 (20%)
Query: 536 QKKKSVTEMQTNPPAEKKAVPAMEKDSLGVSFPEELACKNQPTCSYQQISCLDSVIRYLE 595
Q KS T+ PP +KK +E + + E +NQ + S S S IR ++
Sbjct: 127 QTIKSTTKRSPKPPNKKKTKKVIESEEIT---EEHSVSENQESSSSSSSSSSSSTIRKIK 183
Query: 596 SCNEAAT---LKRKCEFPANVPALRSSDKRKATVSPGPHAGEAEPPSRVNSRTGVGTHLT 652
S +A L++K + ++ + K + P P +PP + +G+
Sbjct: 184 SSKNSAANRELQKKLK-------VKDNKKNRTKKKPTP-----KPPVVDEAGSGLDNGDF 231
Query: 653 SLALPGKAESVASLTSQCSYSSTIVHVGDKKPQPELEMVEDAASGPESLDCLAGPALACG 712
+ P + T+Q + ST + KP + S P + D +L
Sbjct: 232 KVTTPDTS------TTQHNKVSTSPKITTAKP------INPRPSLPPNSDTSKETSLTVN 279
Query: 713 LSQEKEPFKKLGLTKEVLAAHTQ-----KEEQSFLQKFKEIRKLSIFQSHCHYYLQERSK 767
E TKE + Q KE+ + ++ + I K S
Sbjct: 280 KETTVE-------TKETTTTNKQTSTDGKEKTTSAKETQSIEKTS--------------- 317
Query: 768 GQPSERTAPGLRNTSGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGPVSARPPLVGLN 827
A L TS + KP +E+T + GP P
Sbjct: 318 -------AKDLAPTSKV----------------LAKPTPKAETT-TKGPALTTPK----E 349
Query: 828 ATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTV-AAPPAPPHASFTVPAVPVDLQ 886
T +P + + S+ P P P + +A + P PAP T +AP P + T P
Sbjct: 350 PTPTTPKEPA-STTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEP---- 404
Query: 887 HQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQ 946
A P PAP P+ + P P+ P+ P+ P+ PT E A +
Sbjct: 405 ---APTTPKEPAPTTT----KEPAPTTTKSAPTTPKEPAPTTPKKPA-PTTPKEPAPTT- 455
Query: 947 PEFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRS-SSPLQLNLLQLEEAPEGGTG 1005
P+ P+ T+ P++P P T+ P+ +P + + ++P + +E T
Sbjct: 456 PKEPTPTT-PKEP--APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTK 512
Query: 1006 AMGTTGATETAAVGADCKPGTSRDQQP----KAPLTRDEPSDTQNSDALSTS 1053
T E A P T+++ P AP T EPS T + T+
Sbjct: 513 EPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTT 564
Score = 39.3 bits (90), Expect = 0.024
Identities = 55/232 (23%), Positives = 79/232 (34%), Gaps = 48/232 (20%)
Query: 842 PAVPFPA-PVPAAYSLPVFPAPGTVAAP-------PAPPHASFTVPAVPVDLQHQFAVQP 893
P P P P AA + P PAP T P PAP T P P +P
Sbjct: 661 PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 720
Query: 894 PPF----PAP--LAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQP 947
P PAP LAP S + P P+ P+ P+ P+ T
Sbjct: 721 APTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTT----------- 769
Query: 948 EFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQLEEAPEGGTGAM 1007
P++P A + T P+ + +P + +P +L AP G
Sbjct: 770 --------PKEP-APTTPKGTAPTTLKEPAPT--TPKKPAPKEL-------APTTTKGPT 811
Query: 1008 GTTGATETAAVGADCKPGTSRDQQP-----KAPLTRDEPSDTQNSDALSTSS 1054
TT + P T ++ P AP T + P T + + T++
Sbjct: 812 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTT 863
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 53.5 bits (127), Expect = 1e-06
Identities = 88/321 (27%), Positives = 119/321 (37%), Gaps = 27/321 (8%)
Query: 824 VGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPA-VP 882
+ ++A+ P S VP AP PA S+PV P + P PP A V A VP
Sbjct: 275 LSVSASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLALIQAPVPPSAPTLVLAPVP 334
Query: 883 VD-LQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPS-HPTLT-- 938
L A PP PAP + M PS S P TP L AF P+ P+ P T
Sbjct: 335 TPVLAPMPASTPPAAPAPPSVPMPTPTPS-SGPPSTPTLIPAFAPTPVPAPTPAPIFTPA 393
Query: 939 -SEMASASQPEFPSRTSIPR----QPCACPATRATPPSAMGRASPPLFQSRSSSPLQLNL 993
+ M +A+ P+ IP PA +A + + P S PL
Sbjct: 394 PTPMPAATPAAIPTSAPIPASFSLSRVCFPAAQAPAMQKVPLSFQPGTVLTPSQPLVYIP 453
Query: 994 LQLEEAPEGGTGAMGTTGATETAAVGA-------DCKPGTSRDQQPKAPLTRDEPSDTQN 1046
P T G + T + C PG +P R P
Sbjct: 454 PPSCGQPLSVATLPTTLGVSSTLTLPVLPSYLQDRCLPGVL-----ASPELRSYPYAFSV 508
Query: 1047 SDALSTSSGLLNLLLNEDLC-SASGSAASESLGSGSLGCDASPS-GAGSSDTSHTSKYF- 1103
+ L++ S L++L +N C S SGS ++ G G A S S+ T +
Sbjct: 509 ARPLTSDSKLVSLEVNRLPCTSPSGSTTTQPAPDGVPGPLADTSLVTASAKVLPTPQPLL 568
Query: 1104 -GSIDSSENNHKAKMNTGMEE 1123
SS H AKM +G E+
Sbjct: 569 PAPSGSSAPPHPAKMPSGTEQ 589
Score = 47.4 bits (111), Expect = 9e-05
Identities = 75/272 (27%), Positives = 101/272 (37%), Gaps = 48/272 (17%)
Query: 816 PVSARPPLVGLNATAWSPSDTSQSSCPAVPF------PAPVPAAYSLPVF-PAPGTV-AA 867
P + PP V + P+ T S P+ P P PVPA P+F PAP + AA
Sbjct: 347 PAAPAPPSVPM------PTPTPSSGPPSTPTLIPAFAPTPVPAPTPAPIFTPAPTPMPAA 400
Query: 868 PPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSG---TPNLPQAF 924
PA S +PA F++ FPA AP M + SF G TP+ P +
Sbjct: 401 TPAAIPTSAPIPA-------SFSLSRVCFPAAQAPAMQKV--PLSFQPGTVLTPSQPLVY 451
Query: 925 F--PSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATP-----PSAMGRAS 977
PS Q S TL + + +S P S + C P A+P P A A
Sbjct: 452 IPPPSCGQPLSVATLPTTLGVSSTLTLPVLPSYLQDRC-LPGVLASPELRSYPYAFSVAR 510
Query: 978 PPLFQSRSSSPLQLNLL---------QLEEAPEGGTGAMGTTGATETAA----VGADCKP 1024
P S+ S L++N L + AP+G G + T +A P
Sbjct: 511 PLTSDSKLVS-LEVNRLPCTSPSGSTTTQPAPDGVPGPLADTSLVTASAKVLPTPQPLLP 569
Query: 1025 GTSRDQQPKAPLTRDEPSDTQNSDALSTSSGL 1056
S P P ++ Q T S L
Sbjct: 570 APSGSSAPPHPAKMPSGTEQQTEGTSVTFSPL 601
Score = 45.8 bits (107), Expect = 3e-04
Identities = 66/238 (27%), Positives = 85/238 (35%), Gaps = 61/238 (25%)
Query: 812 GSGGPVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPPAP 871
G+G PV PLV N + P PAP+ PAPG+ + P +
Sbjct: 180 GTGVPVEGTLPLVTTNFS---------------PLPAPICP-------PAPGSASVPHSV 217
Query: 872 PHASFTVP-AVPVDLQH------QFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAF 924
P A F VP +VP + H Q A P PLAPV A
Sbjct: 218 PDA-FQVPLSVPAPVPHSGLVPVQVATSVPAPSPPLAPVPAL------------------ 258
Query: 925 FPSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSR 984
P PS PTL S+ S P S + + P + P + P SA A PL
Sbjct: 259 ---APAPPSVPTLISD----SNPLSVSASVLVPVPASAPPSGPVPLSA--PAPAPLSVPV 309
Query: 985 SSSPLQLNLLQLEEAPEGGTGAMGTTGATETAAVGADCKPGTSRDQQPKAPLTRDEPS 1042
S+ PL L+Q P T + A + A P + P P+ PS
Sbjct: 310 SAPPLA--LIQAPVPPSAPTLVLAPVPTPVLAPMPASTPP--AAPAPPSVPMPTPTPS 363
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 53.1 bits (126), Expect = 2e-06
Identities = 64/226 (28%), Positives = 89/226 (39%), Gaps = 52/226 (23%)
Query: 834 SDTSQSSCPAVPFPA-------PVPAAYSLPVFPAPGTVAA-PPAP--PHASFTVPAVPV 883
S S CP +P PA PVP+ P P A PPA P T PA+P
Sbjct: 812 SQGSHIHCPQLPQPALHQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMPP 871
Query: 884 DLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMAS 943
Q Q A+ PPP P P T LPQ PS P PS
Sbjct: 872 GPQSQ-ALHPPPRQTPTPP--------------TTQLPQQVQPSLPAAPS---------- 906
Query: 944 ASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQLEEAPEGG 1003
A QP+ +QP + +T A+ P+ + PL + ++PL + +E G
Sbjct: 907 ADQPQ--------QQPRSQQSTAASVPTP----TAPLLPPQPATPLSQPAVSIE----GQ 950
Query: 1004 TGAMGTTGATETAAVG-ADCKPGTSRDQQPKAPLTRDEPSDTQNSD 1048
+T +TE + A+ +P + K + + EP+DTQ D
Sbjct: 951 VSNPPSTSSTEVNSQAIAEKQPSQEVKMEAKMEVDQPEPADTQPED 996
Score = 32.0 bits (71), Expect = 3.8
Identities = 33/131 (25%), Positives = 43/131 (32%), Gaps = 6/131 (4%)
Query: 860 PAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPN 919
P+P T A P P T P P P P L A S +G
Sbjct: 1848 PSP-TPATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQGKAAGQVT 1906
Query: 920 LPQAFFPSQPQFPSHPTLTSEMA-----SASQPEFPSRTSIPRQPCACPATRATPPSAMG 974
P +QP P P EMA +A + I ++P TP + MG
Sbjct: 1907 PPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQMPPMTPMAPMG 1966
Query: 975 RASPPLFQSRS 985
PP+ + S
Sbjct: 1967 MNPPPMTRGPS 1977
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 52.4 bits (124), Expect = 3e-06
Identities = 89/385 (23%), Positives = 155/385 (40%), Gaps = 43/385 (11%)
Query: 682 KKPQPELEMVEDAASGPESLDC-LAGPALACGLSQEKEPFKKLGLTKEV-----LAAHTQ 735
KKP P+ +V++A SG ++ D + P + + K+ K + L ++
Sbjct: 76 KKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSD 135
Query: 736 KEEQSFLQKFKEIRKLSIFQSHCHYYLQERSKGQPSERTAPGLRNTSGIDSPWKKTGKNR 795
+++ L KE + ++ +++ E+T + T I+ K + K+
Sbjct: 136 TSKETSLTVNKE----TTVETKETTTTNKQTSTDGKEKTTSA-KETQSIE---KTSAKDL 187
Query: 796 KLKSKRV-KPRDSSESTGSGGPVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAY 854
SK + KP +E+T + GP P T +P + + S+ P P P + +A
Sbjct: 188 APTSKVLAKPTPKAETT-TKGPALTTPK----EPTPTTPKEPA-STTPKEPTPTTIKSAP 241
Query: 855 SLPVFPAPGTV-AAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSF 913
+ P PAP T +AP P + T P A P PAP P+ +
Sbjct: 242 TTPKEPAPTTTKSAPTTPKEPAPTTTKEP-------APTTPKEPAPTTT----KEPAPTT 290
Query: 914 PSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPPSAM 973
P P+ P+ P+ P+ PT E A + P+ P+ T+ P++P P T+ P+
Sbjct: 291 TKSAPTTPKEPAPTTPKKPA-PTTPKEPAPTT-PKEPTPTT-PKEP--APTTKEPAPTTP 345
Query: 974 GRASPPLFQSRS-SSPLQLNLLQLEEAPEGGTGAMGTTGATETAAVGADCKPGTSRDQQP 1032
+P + + ++P + +E T T E A P T+++ P
Sbjct: 346 KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 405
Query: 1033 ----KAPLTRDEPSDTQNSDALSTS 1053
AP T EPS T + T+
Sbjct: 406 TTTKSAPTTPKEPSPTTTKEPAPTT 430
Score = 39.3 bits (90), Expect = 0.024
Identities = 55/232 (23%), Positives = 79/232 (34%), Gaps = 48/232 (20%)
Query: 842 PAVPFPA-PVPAAYSLPVFPAPGTVAAP-------PAPPHASFTVPAVPVDLQHQFAVQP 893
P P P P AA + P PAP T P PAP T P P +P
Sbjct: 527 PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 586
Query: 894 PPF----PAP--LAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQP 947
P PAP LAP S + P P+ P+ P+ P+ T
Sbjct: 587 APTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTT----------- 635
Query: 948 EFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQLEEAPEGGTGAM 1007
P++P A + T P+ + +P + +P +L AP G
Sbjct: 636 --------PKEP-APTTPKGTAPTTLKEPAPT--TPKKPAPKEL-------APTTTKGPT 677
Query: 1008 GTTGATETAAVGADCKPGTSRDQQP-----KAPLTRDEPSDTQNSDALSTSS 1054
TT + P T ++ P AP T + P T + + T++
Sbjct: 678 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTT 729
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 52.4 bits (124), Expect = 3e-06
Identities = 89/385 (23%), Positives = 155/385 (40%), Gaps = 43/385 (11%)
Query: 682 KKPQPELEMVEDAASGPESLDC-LAGPALACGLSQEKEPFKKLGLTKEV-----LAAHTQ 735
KKP P+ +V++A SG ++ D + P + + K+ K + L ++
Sbjct: 117 KKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSD 176
Query: 736 KEEQSFLQKFKEIRKLSIFQSHCHYYLQERSKGQPSERTAPGLRNTSGIDSPWKKTGKNR 795
+++ L KE + ++ +++ E+T + T I+ K + K+
Sbjct: 177 TSKETSLTVNKE----TTVETKETTTTNKQTSTDGKEKTTSA-KETQSIE---KTSAKDL 228
Query: 796 KLKSKRV-KPRDSSESTGSGGPVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAY 854
SK + KP +E+T + GP P T +P + + S+ P P P + +A
Sbjct: 229 APTSKVLAKPTPKAETT-TKGPALTTPK----EPTPTTPKEPA-STTPKEPTPTTIKSAP 282
Query: 855 SLPVFPAPGTV-AAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSF 913
+ P PAP T +AP P + T P A P PAP P+ +
Sbjct: 283 TTPKEPAPTTTKSAPTTPKEPAPTTTKEP-------APTTPKEPAPTTT----KEPAPTT 331
Query: 914 PSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSRTSIPRQPCACPATRATPPSAM 973
P P+ P+ P+ P+ PT E A + P+ P+ T+ P++P P T+ P+
Sbjct: 332 TKSAPTTPKEPAPTTPKKPA-PTTPKEPAPTT-PKEPTPTT-PKEP--APTTKEPAPTTP 386
Query: 974 GRASPPLFQSRS-SSPLQLNLLQLEEAPEGGTGAMGTTGATETAAVGADCKPGTSRDQQP 1032
+P + + ++P + +E T T E A P T+++ P
Sbjct: 387 KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAP 446
Query: 1033 ----KAPLTRDEPSDTQNSDALSTS 1053
AP T EPS T + T+
Sbjct: 447 TTTKSAPTTPKEPSPTTTKEPAPTT 471
Score = 39.3 bits (90), Expect = 0.024
Identities = 55/232 (23%), Positives = 79/232 (34%), Gaps = 48/232 (20%)
Query: 842 PAVPFPA-PVPAAYSLPVFPAPGTVAAP-------PAPPHASFTVPAVPVDLQHQFAVQP 893
P P P P AA + P PAP T P PAP T P P +P
Sbjct: 568 PEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEP 627
Query: 894 PPF----PAP--LAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQP 947
P PAP LAP S + P P+ P+ P+ P+ T
Sbjct: 628 APTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTT----------- 676
Query: 948 EFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQLEEAPEGGTGAM 1007
P++P A + T P+ + +P + +P +L AP G
Sbjct: 677 --------PKEP-APTTPKGTAPTTLKEPAPT--TPKKPAPKEL-------APTTTKGPT 718
Query: 1008 GTTGATETAAVGADCKPGTSRDQQP-----KAPLTRDEPSDTQNSDALSTSS 1054
TT + P T ++ P AP T + P T + + T++
Sbjct: 719 STTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTT 770
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 52.4 bits (124), Expect = 3e-06
Identities = 46/158 (29%), Positives = 65/158 (41%), Gaps = 17/158 (10%)
Query: 840 SCPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAP 899
+ P P P PVP A P FPA +PP PP VP + Q F +PPP P
Sbjct: 801 AAPPTPTP-PVPPAKKQPAFPASYIPPSPPTPP---VPVPPPTLPKQQSFCAKPPPSPLS 856
Query: 900 LAPVMAFMLPSYSFPSGTPNLPQAFFPSQP--QFPSHPTLTSEMASASQPEF-PSRTSIP 956
P + + S P TP + SQP P++ S A ++P++ PS +P
Sbjct: 857 PVPSVVKQIASQFPPPPTPPAME----SQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVP 912
Query: 957 RQPCACPATRAT------PPSAMGRASPPLFQSRSSSP 988
P ++ PPS + PP + S +P
Sbjct: 913 SPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTP 950
Score = 44.7 bits (104), Expect = 6e-04
Identities = 49/173 (28%), Positives = 63/173 (36%), Gaps = 40/173 (23%)
Query: 849 PVPAAYSLPVFPAPG-----------TVAAPPAPPHASFTVPAVPVDLQHQFAVQP-PPF 896
P P A SLP F AP T APP PP P +P L Q +P
Sbjct: 730 PAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPP----PPIPAPLPPQAPPKPLVTI 785
Query: 897 PAP-----LAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPS 951
PAP +APV+ P P P Q FP+ PS PT P P
Sbjct: 786 PAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPPT---PPVPVPPPTLPK 842
Query: 952 RTSIPRQPCACP-----------ATRATPPSAMGRASPPLFQSRSSSPLQLNL 993
+ S +P P A++ PP +PP +S+ P+ N+
Sbjct: 843 QQSFCAKPPPSPLSPVPSVVKQIASQFPPP-----PTPPAMESQPLKPVPANV 890
Score = 39.3 bits (90), Expect = 0.024
Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 9/141 (6%)
Query: 767 KGQPSERTAPGLRNTSGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGPVSARPPLVG- 825
K P+ + ++++SG + P K L SK P +S + P A PP G
Sbjct: 970 KPPPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGK 1029
Query: 826 LNATAWSPSDTSQSSCPAVPFPAPVPAAY---SLPVFPAPGTVA-APPAPPHASFTVPAV 881
LN + + Q C V APV + S+ FP+P + + PP PP +P
Sbjct: 1030 LNLSGVNLPGVLQQGC--VSAKAPVLSGRGKDSVVEFPSPPSDSDFPPPPPETELPLP-- 1085
Query: 882 PVDLQHQFAVQPPPFPAPLAP 902
P+++ F+ P A + P
Sbjct: 1086 PIEIPAVFSGNTSPKVAVVNP 1106
Score = 38.1 bits (87), Expect = 0.053
Identities = 65/267 (24%), Positives = 93/267 (34%), Gaps = 32/267 (11%)
Query: 752 SIFQSHCHYYLQERSKGQPSERTAPGLRNTSGIDSPWKKTGKNRKLKSKRVKPRDSSES- 810
SI +S ++ Q S G + A +R+ S + S + + K + K R S +
Sbjct: 542 SIPESQSNHSNQSDS-GVSDTQPAGHVRSQSIVSSVFSEAWKRGTQLEESSKARMESMNR 600
Query: 811 --TGSGGPVSARPPLVG-LNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAA 867
T P+S +P +V A+ SP P P P P P LP AP +A
Sbjct: 601 PYTSLVPPLSPQPKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSA 660
Query: 868 PP-------------APPH--ASFTVPAVPVDLQHQFA----------VQPPPFPAPLAP 902
P A H A F P PV +Q Q V PPP P P P
Sbjct: 661 APMFVKYSTITRLQNASQHSGALFKPPTPPV-MQSQSVKPQILVPPNGVVPPPPPPPPPP 719
Query: 903 VMAFMLPSYSFPSGTPNLPQAFFPSQP-QFPSHPTLTSEMASASQPEFPSRTSIPRQPCA 961
+ P+LPQ P P + +T P P +P Q
Sbjct: 720 TPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQAPP 779
Query: 962 CPATRATPPSAMGRASPPLFQSRSSSP 988
P P++ +P + Q+ +P
Sbjct: 780 KPLVTIPAPTSTKTVAPVVTQAAPPTP 806
Score = 34.7 bits (78), Expect = 0.59
Identities = 46/175 (26%), Positives = 67/175 (38%), Gaps = 36/175 (20%)
Query: 797 LKSKRVKPRDSSESTGSGGPVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAAYSL 856
++S+ +KP ++ + S V A+P W PS P+ FP P P S
Sbjct: 878 MESQPLKPVPANVAPQSPPAVKAKPK--------WQPSSIP---VPSPDFPPPPPE--SS 924
Query: 857 PVFPAPG--TVAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFP 914
VFP P V APP PP + A P P +P P P
Sbjct: 925 LVFPPPPPSPVPAPPPPPPPT----ASPT---------PDKSGSPGKKTSKTSSPGGKKP 971
Query: 915 SGTPNLPQAFFPS------QPQFPSHPTLTSEMASASQPEFPSRTSIPRQPCACP 963
TP + S +P+ PS +L S+ ++ PS+ ++P P A P
Sbjct: 972 PPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLP--PPAAP 1024
Score = 30.8 bits (68), Expect = 8.5
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 7 FPPSPSNPTKEPVEPQPSQVPLQEDVDMSSGSSGHETNENCSTG 50
FPP P +P P P P P SGS G +T++ S G
Sbjct: 927 FPPPPPSPVPAPPPPPP---PTASPTPDKSGSPGKKTSKTSSPG 967
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 52.0 bits (123), Expect = 4e-06
Identities = 76/290 (26%), Positives = 103/290 (35%), Gaps = 34/290 (11%)
Query: 826 LNATAWSPSDTSQSSCPAVPFPAPVPAAYSLPVFPAP-GTVAAPPAPPHASFTVPAV--- 881
L +W+ TS SS P P P + P+ P P + +PP P S P
Sbjct: 792 LEHRSWTAFSTSSSS-PGTPLSPGNPFSPGTPISPGPIFPITSPPCHPSPSPFSPISSQV 850
Query: 882 -------PVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSH 934
P F+ P FP PL+ LP+ S P+ +P Q S P FP
Sbjct: 851 SSNPSPHPTSSPLPFSSSTPEFPVPLSQCPWSSLPTTSPPTFSPTCSQVTL-SSPFFPPC 909
Query: 935 PTLTSEMASASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPP---LFQSRSSSPLQL 991
P+ +S FPS T+ P A + A A SP L QS + P L
Sbjct: 910 PSTSS---------FPSTTAAPLLSLASAFSLAVMTVAQSLLSPSPGLLSQSPPAPPSPL 960
Query: 992 NLLQLEE--APEGGTGAMGTTGATETAAVGADCK--PGTSRDQQPKAPLTRD-EPSDTQN 1046
L L AP G T E+ A + PG +R AP++ + +P
Sbjct: 961 PSLPLPPPVAPGGQESPSPHTAEVESEASPPPARPLPGEAR----LAPISEEGKPQLVGR 1016
Query: 1047 SDALSTSSGLLNLLLNEDLCSASGSAASESLGSGSLGCDASPSGAGSSDT 1096
S+ L L + SGS + S D S G +T
Sbjct: 1017 FQVTSSKEPAEPLPLQPTSPTLSGSPKPSTPQLTSESSDTEDSAGGGPET 1066
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 52.0 bits (123), Expect = 4e-06
Identities = 107/499 (21%), Positives = 162/499 (32%), Gaps = 74/499 (14%)
Query: 535 EQKKKSVTEMQTNPPAEKKAVPAMEKDSLGVSFPEELACKNQPTCSYQQISCLDSVIR-- 592
E+ +V+ PP + A P+ S S + + + Q+++ L ++
Sbjct: 462 EEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAV 521
Query: 593 --YLESCNEAATLKRKCEFPANVPALRSSDKRKATVSPGPHAGEAEPPSRVNSRTGVGTH 650
L + ++ K K + + KRK V + EPP + +
Sbjct: 522 HEQLAALSQPQQNKPKKKEKDKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNS 581
Query: 651 LTSLALPGKAESVASLTSQCSYSSTIVHVGDKKPQPELEMVEDAASGPESLDCLAGPALA 710
S P +S KP P E E+ P S +
Sbjct: 582 NVSKKEPAPMKS--------------------KPPPTYESEEEDKCKPMSYE----EKRQ 617
Query: 711 CGLSQEKEPFKKLGLTKEVLAAHTQKEEQSFLQKFK---------EIRKLSIFQSHCHYY 761
L K P +KLG ++ + + S + + +R+L + + C
Sbjct: 618 LSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCL-- 675
Query: 762 LQERSKGQPSERTAPGLRNTSGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGPVSARP 821
R K +P + +S + K + S DS +S P S +
Sbjct: 676 ---RKKRKPQAEKVDVIAGSSKM----KGFSSSESESSSESSSSDSEDSETEMAPKSKKK 728
Query: 822 PLVGLNATAWSPSDTSQSSCPAVPFPA-PVPAAYSLPVFPAPGTVAAPPAPPHASFTVPA 880
G Q P P P P P P P PP PP P+
Sbjct: 729 GHPGREQKKHHHHHHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPP----PS 784
Query: 881 VPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSF-PSGTPNLPQAFFPSQPQFPSH----- 934
+P PPPF A PV+ LP F P G P P QP+ P H
Sbjct: 785 MPQQAAPAMKSSPPPFIATQVPVLEPQLPGSVFDPIGHFTQPILHLP-QPELPPHLPQPP 843
Query: 935 ----PTLTSEMASASQPEFPSRTSIPRQP-------CACPATRATPP--SAMGRASPPLF 981
P ++ A S P ++P+QP A P A PP S +P L
Sbjct: 844 EHSTPPHLNQHAVVSPPAL--HNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLP 901
Query: 982 QSRSSSPLQLNLLQLEEAP 1000
Q + P Q+ LL+ EE P
Sbjct: 902 QPPMAQPPQV-LLEDEEPP 919
Score = 33.9 bits (76), Expect = 1.0
Identities = 40/166 (24%), Positives = 54/166 (32%), Gaps = 31/166 (18%)
Query: 809 ESTGSGGPVSARPPLVGLNATAWSPSDTSQSSCPAVP----FPAPVPAAYSLPVFPAPGT 864
+ TG+ P + P N T S +Q+ P P P P PA + P
Sbjct: 184 KETGTAKPGVSTVP----NTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVM 239
Query: 865 VAAPPAPPHASFTVPAVPVDLQHQFAVQPPPFPAPL-----APVMAFMLPSYSFPSGTPN 919
PP P VP P QPPP PAP P++A G
Sbjct: 240 TVVPPQPLQTPPPVPPQP---------QPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKR 290
Query: 920 LPQAFFPS-------QPQFPSHPTLT--SEMASASQPEFPSRTSIP 956
P+ P P P T + +S+P P + +P
Sbjct: 291 KADTTTPTTIDPIHEPPSLPPEPKTTKLGQRRESSRPVKPPKKDVP 336
Score = 32.0 bits (71), Expect = 3.8
Identities = 67/272 (24%), Positives = 89/272 (32%), Gaps = 70/272 (25%)
Query: 769 QPSERTAPGLRNTSGIDSPWKKTGKNRKLKSKRVKPRDSSESTGSGGPVSARPPLVGLNA 828
QP E + P N + SP + L + +P S + P ARPP V
Sbjct: 841 QPPEHSTPPHLNQHAVVSP---PALHNALPQQPSRP---SNRAAALPPKPARPPAV---- 890
Query: 829 TAWSPSDTSQSSCPAVPF-------------PAPVPAAYSL--------------PVFPA 861
SP+ T P P PAP + + P+ P+
Sbjct: 891 ---SPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPS 947
Query: 862 PGTVAAPPAP----PHASFTVPAVPVDLQHQFAVQPPPFPAP------LAPVMAFMLPSY 911
+ PP P PH P+V LQ Q PPP P P P L
Sbjct: 948 VKVQSQPPPPLPPPPH-----PSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPM 1002
Query: 912 SFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSRT----SIPRQPCACPATRA 967
F + P P Q Q P HP + QP P + PR + P +
Sbjct: 1003 QFSTHIQQPP----PPQGQQPPHPP-PGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTG 1057
Query: 968 ---TPPSAMGRASPPLFQSRS---SSPLQLNL 993
PS + SP + Q +S SP Q N+
Sbjct: 1058 HLREAPSPLMIHSPQMSQFQSLTHQSPPQQNV 1089
>gi|50345881 cytoplasmic polyadenylation element binding protein 3
[Homo sapiens]
Length = 698
Score = 51.2 bits (121), Expect = 6e-06
Identities = 53/201 (26%), Positives = 77/201 (38%), Gaps = 16/201 (7%)
Query: 835 DTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPPA---PPHASFTVPAVPVDLQHQFAV 891
++S S P+ P + P PA AAPPA P P +P HQ
Sbjct: 29 ESSVSEAPSTPLSSETPKPEENSAVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQ 88
Query: 892 QPPPFPAPLAPVMAFMLPSY--SFPSGTPN-LPQAFFPS---------QPQFPSHPTLTS 939
QPPP P AP A + PS+ ++ +GT N + +FF FP H
Sbjct: 89 QPPPPQEPAAP-GASLSPSFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVF 147
Query: 940 EMASASQPEFPSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRSSSPLQLNLLQLEEA 999
+ Q + P PA + P+ +A PP + +SP Q Q A
Sbjct: 148 GGTFSPQIGLAQTQHHQQPPPPAPAPQPAQPAQPPQAQPPQQRRSPASPSQAPYAQRSAA 207
Query: 1000 PEGGTGAMGTTGATETAAVGA 1020
G + T+ + ++AV A
Sbjct: 208 AAYGHQPIMTSKPSSSSAVAA 228
>gi|24431935 reticulon 4 isoform A [Homo sapiens]
Length = 1192
Score = 51.2 bits (121), Expect = 6e-06
Identities = 51/164 (31%), Positives = 64/164 (39%), Gaps = 25/164 (15%)
Query: 815 GPVSARPPLVGLNATAWSPSDTSQSSCPAVPFPAPVPAA----YSLPVFPAPGTVAAPPA 870
GP+ A PP+ +W PS S + VP P+P+ AA LP P A PP
Sbjct: 92 GPLPAAPPVAPERQPSWDPSPVSST----VPAPSPLSAAAVSPSKLPEDDEP--PARPPP 145
Query: 871 PPHASFTVPAVPVDLQHQFAVQPPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQ 930
PP AS + A P V PP PAP AP P SG+ + P+
Sbjct: 146 PPPASVSPQAEP--------VWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLFALPA--- 194
Query: 931 FPSHPTLTSEMASASQPEFPSRTSIPRQ---PCACPATRATPPS 971
S P + S + E P T Q P T A+ PS
Sbjct: 195 -ASEPVIRSSAENMDLKEQPGNTISAGQEDFPSVLLETAASLPS 237
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 50.4 bits (119), Expect = 1e-05
Identities = 60/223 (26%), Positives = 79/223 (35%), Gaps = 52/223 (23%)
Query: 833 PSDTSQSSCPAVPFPAPVPAAYSLPVFPAPGTVAAPPAPPHASFTVPAVPVDLQHQFAVQ 892
PS QS PAVP P + AA LP FPA G P PP +Q
Sbjct: 858 PSPPVQSVSPAVPTPPSMSAA--LP-FPAGGLGMPPSLPPPP----------------LQ 898
Query: 893 PPPFPAPLAPVMAFMLPSYSFPSGTPNLPQAFFPSQPQFPSHPTLTSEMASASQPEFPSR 952
PP P + PV+ Y+ P P P P PT+ + P
Sbjct: 899 PPSLPLSMGPVLPDPFTHYAPLPSWPCYPHVSPSGYPCLPPPPTVPLVSGTPGAYAVPPT 958
Query: 953 TSIPRQPCACPATRAT----------------------------PPSAMGRASP-PLFQS 983
S+P P P + + PP+++GRA P P +S
Sbjct: 959 CSVPWAPPPAPVSPYSSTCTYGPLGWGPGPQHAPFWSTVPPPPLPPASIGRAVPQPKMES 1018
Query: 984 RS--SSPLQLNLLQLEEAPEGGTGAMGTTGATETAAVGADCKP 1024
R + P + N+L L AP G G GA +T + KP
Sbjct: 1019 RGTPAGPPE-NVLPLSMAPPLSLGLPG-HGAPQTEPTKVEVKP 1059
Score = 31.6 bits (70), Expect = 5.0
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 484 SLGSNGSHEHLMSQTSSSDSNGHEDSRRRRAEICKNGNKTKNRSHYSHESGEQKKKSVTE 543
S S+ S S +SSS S S RRR++ + + ++ HY + QK++++ E
Sbjct: 1482 SSSSSSSSSSSSSSSSSSRSRSRSPSPRRRSDRRRRYSSYRSHDHYQRQRVLQKERAIEE 1541
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,200,060
Number of Sequences: 37866
Number of extensions: 3060316
Number of successful extensions: 17358
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 914
Number of HSP's that attempted gapping in prelim test: 12677
Number of HSP's gapped (non-prelim): 3918
length of query: 1255
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1141
effective length of database: 13,930,794
effective search space: 15895035954
effective search space used: 15895035954
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.