Guide to the Human Genome
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Name: IL15RA Sequence: fasta or formatted (267aa) NCBI GI: 4504649
Description:

interleukin 15 receptor, alpha isoform 1 precursor

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt prot [231aa] interleukin 15 receptor, alpha isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         26           2
 C cysteine            3.0          8           1
 D aspartate           1.9          5           1
 E glutamate           4.9         13           1
 F phenylalanine       0.4          1           1
 G glycine             5.2         14           1
 H histidine           3.4          9           2
 I isoleucine          2.6          7           1
 K lysine              3.4          9           1
 L leucine            10.1         27           7
 M methionine          1.9          5           1
 N asparagine          2.6          7           2
 P proline            10.1         27           3
 Q glutamine           2.6          7           1
 R arginine            4.9         13           2
 S serine             13.9         37           2
 T threonine          10.9         29           2
 V valine              5.2         14           1
 W tryptophan          1.5          4           1
 Y tyrosine            1.9          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 15 receptor, alpha isoform 1 precursor [H... 
IL15RA                0.857   interleukin 15 receptor, alpha isoform 2 
MUC2                  0.050   mucin 2 precursor 
LOC100294420          0.050   PREDICTED: similar to mucin 2 
LOC100133756          0.039   PREDICTED: hypothetical protein, partial 
MUC5AC                0.037   mucin 5AC 
MUC5B                 0.037   mucin 5, subtype B, tracheobronchial 
MUC17                 0.037   mucin 17 
MUC12                 0.033   PREDICTED: mucin 12 
LOC100133408          0.031   PREDICTED: similar to mucin 
MUC12                 0.031   PREDICTED: mucin 12, cell surface associated 
MUC6                  0.031   mucin 6, gastric 
LOC100134138          0.029   PREDICTED: similar to mucin, partial 
MUC16                 0.029   mucin 16 
LOC100130716          0.029   PREDICTED: similar to mucin 11 
LOC100130716          0.029   PREDICTED: similar to Mucin-12 
MUC3A                 0.029   PREDICTED: mucin 3A, intestinal 
MUC12                 0.027   PREDICTED: mucin 12 
LAMP3                 0.027   lysosomal-associated membrane protein 3 
BAT2                  0.027   HLA-B associated transcript-2 
MUC3A                 0.027   PREDICTED: mucin 3A, cell surface associated, parti...
MUC12                 0.027   PREDICTED: mucin 12 
EP300                 0.025   E1A binding protein p300 
ZMIZ2                 0.025   zinc finger, MIZ-type containing 2 isoform 1 
ZMIZ2                 0.025   zinc finger, MIZ-type containing 2 isoform 2 
MDC1                  0.025   mediator of DNA-damage checkpoint 1 
LOC100132635          0.023   PREDICTED: similar to mucin 5, partial 
KRTAP4-9              0.023   PREDICTED: keratin associated protein 4-9 
CTDP1                 0.023   CTD (carboxy-terminal domain, RNA polymerase II, pol...
CTDP1                 0.023   CTD (carboxy-terminal domain, RNA polymerase II, pol...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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