LAMP3 26986

Name: LAMP3	Sequence: fasta or formatted (416aa)		NCBI GI: 38455385
Description: lysosomal-associated membrane protein 3		Referenced in: Lysosomes and Related Organelles
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 42 4 C cysteine 1.4 6 1 D aspartate 3.4 14 2 E glutamate 2.6 11 2 F phenylalanine 3.4 14 1 G glycine 5.8 24 2 H histidine 3.1 13 1 I isoleucine 4.8 20 1 K lysine 4.1 17 2 L leucine 6.7 28 3 M methionine 1.7 7 1 N asparagine 3.4 14 2 P proline 7.7 32 2 Q glutamine 7.0 29 2 R arginine 2.9 12 2 S serine 8.2 34 3 T threonine 13.7 57 3 V valine 7.2 30 2 W tryptophan 0.0 0 0 Y tyrosine 2.9 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lysosomal-associated membrane protein 3 LAMP2 0.094 lysosomal-associated membrane protein 2 isoform B pre... LAMP2 0.092 lysosomal-associated membrane protein 2 isoform C p... LAMP2 0.091 lysosomal-associated membrane protein 2 isoform A pre... CD68 0.091 CD68 antigen isoform A LAMP1 0.087 lysosomal-associated membrane protein 1 CD68 0.084 CD68 antigen isoform B MUC2 0.062 mucin 2 precursor LOC100294420 0.051 PREDICTED: similar to mucin 2 MUC5AC 0.051 mucin 5AC MUC5B 0.048 mucin 5, subtype B, tracheobronchial LOC100134147 0.041 PREDICTED: hypothetical protein LOC100132635 0.041 PREDICTED: similar to mucin 5, partial MUC17 0.041 mucin 17 LOC730474 0.040 PREDICTED: hypothetical protein, partial MUC4 0.040 mucin 4 isoform a MUC6 0.040 mucin 6, gastric LOC100128719 0.040 PREDICTED: hypothetical protein, partial LOC730474 0.040 PREDICTED: hypothetical protein LOC100128719 0.040 PREDICTED: hypothetical protein, partial LOC100133761 0.036 PREDICTED: similar to Mucin-6, partial LOC100133408 0.035 PREDICTED: similar to mucin LOC100131514 0.034 PREDICTED: similar to intestinal mucin MUC3B MUC7 0.034 mucin 7, secreted precursor MUC7 0.034 mucin 7, secreted precursor MUC7 0.034 mucin 7, secreted precursor LOC284297 0.034 hypothetical protein LOC284297 LOC100294470 0.034 PREDICTED: hypothetical protein, partial PRG4 0.032 proteoglycan 4 isoform D PRG4 0.032 proteoglycan 4 isoform C Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.