Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4503765
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503765 fragile X mental retardation 1 [Homo sapiens]
(632 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503765 fragile X mental retardation 1 [Homo sapiens] 1277 0.0
gi|61835164 fragile X mental retardation-related protein 1 isofo... 508 e-144
gi|61835148 fragile X mental retardation-related protein 1 isofo... 508 e-144
gi|4758410 fragile X mental retardation syndrome related protein... 485 e-137
gi|61835172 fragile X mental retardation-related protein 1 isofo... 366 e-101
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 44 5e-04
gi|14249158 hepatoma-derived growth factor-related protein 2 iso... 44 5e-04
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 43 8e-04
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 42 0.001
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 42 0.002
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 41 0.003
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 41 0.003
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 41 0.004
gi|28269693 xylosyltransferase I [Homo sapiens] 40 0.007
gi|145312259 tudor and KH domain containing isoform a [Homo sapi... 40 0.009
gi|145312270 tudor and KH domain containing isoform a [Homo sapi... 40 0.009
gi|145312256 tudor and KH domain containing isoform a [Homo sapi... 40 0.009
gi|167234419 thyroid hormone receptor associated protein 3 [Homo... 39 0.011
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 39 0.015
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 39 0.015
gi|15011916 nucleolar protein family A, member 1 [Homo sapiens] 39 0.015
gi|9506713 nucleolar protein family A, member 1 [Homo sapiens] 39 0.015
gi|21322252 androgen receptor isoform 1 [Homo sapiens] 38 0.025
gi|239753353 PREDICTED: hypothetical protein [Homo sapiens] 38 0.032
gi|239747921 PREDICTED: hypothetical protein XP_002346480 [Homo ... 38 0.032
gi|239741815 PREDICTED: hypothetical protein XP_002342320 [Homo ... 38 0.032
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 38 0.032
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 37 0.042
gi|12056465 fibrillarin [Homo sapiens] 37 0.042
gi|5031923 meiotic recombination 11 homolog A isoform 1 [Homo sa... 37 0.055
>gi|4503765 fragile X mental retardation 1 [Homo sapiens]
Length = 632
Score = 1277 bits (3304), Expect = 0.0
Identities = 632/632 (100%), Positives = 632/632 (100%)
Query: 1 MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPDRQIPFHDVRFPPPVGYNKDIN 60
MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPDRQIPFHDVRFPPPVGYNKDIN
Sbjct: 1 MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPDRQIPFHDVRFPPPVGYNKDIN 60
Query: 61 ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP 120
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
Sbjct: 61 ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP 120
Query: 121 ATKDTFHKIKLDVPEDLRQMCAKEAAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKR 180
ATKDTFHKIKLDVPEDLRQMCAKEAAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKR
Sbjct: 121 ATKDTFHKIKLDVPEDLRQMCAKEAAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKR 180
Query: 181 AHMLIDMHFRSLRTKLSLIMRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN 240
AHMLIDMHFRSLRTKLSLIMRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
Sbjct: 181 AHMLIDMHFRSLRTKLSLIMRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN 240
Query: 241 IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN 300
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN
Sbjct: 241 IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN 300
Query: 301 GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPSNNSRVGPNAPEEKKHLDIKE 360
GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPSNNSRVGPNAPEEKKHLDIKE
Sbjct: 301 GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPSNNSRVGPNAPEEKKHLDIKE 360
Query: 361 NSTHFSQPNSTKVQRVLVASSVVAGESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYH 420
NSTHFSQPNSTKVQRVLVASSVVAGESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYH
Sbjct: 361 NSTHFSQPNSTKVQRVLVASSVVAGESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYH 420
Query: 421 LNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRG 480
LNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRG
Sbjct: 421 LNYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRG 480
Query: 481 HGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRG 540
HGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRG
Sbjct: 481 HGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRG 540
Query: 541 QGGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSS 600
QGGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSS
Sbjct: 541 QGGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSS 600
Query: 601 EGSRLRTGKDRNQKKEKPDSVDGQQPLVNGVP 632
EGSRLRTGKDRNQKKEKPDSVDGQQPLVNGVP
Sbjct: 601 EGSRLRTGKDRNQKKEKPDSVDGQQPLVNGVP 632
>gi|61835164 fragile X mental retardation-related protein 1 isoform
b [Homo sapiens]
Length = 539
Score = 508 bits (1307), Expect = e-144
Identities = 247/334 (73%), Positives = 283/334 (84%)
Query: 1 MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPDRQIPFHDVRFPPPVGYNKDIN 60
M EL VEVRGSNGAFYK F+KDVHEDS+TV FENNWQP+RQ+PF++VR PPP K+I+
Sbjct: 1 MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS 60
Query: 61 ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP 120
E DEVEVYSRAN++EPC WWLAKVRM+KGEFYVIEYAACDATYNEIVT ERLR VN NK
Sbjct: 61 EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT 120
Query: 121 ATKDTFHKIKLDVPEDLRQMCAKEAAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKR 180
K+TF K +DVPEDLR+ CA E AHKDFKKAVGA + Y PE QL+ILS +E T KR
Sbjct: 121 VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR 180
Query: 181 AHMLIDMHFRSLRTKLSLIMRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN 240
++L DMH RS+RTKL L+ RNEEA+K LE ++QLA+ FHE+F+VREDLMGLAIGTHG+N
Sbjct: 181 VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN 240
Query: 241 IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN 300
IQQARKVPGVTAI+LDEDT TF IYGE DAVKKAR FLEF ED IQVPRNLVGKVIGKN
Sbjct: 241 IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN 300
Query: 301 GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMP 334
GK+IQEIVDKSGVVRVRIE +NE +P+E+ ++P
Sbjct: 301 GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVP 334
Score = 162 bits (409), Expect = 1e-39
Identities = 132/350 (37%), Positives = 166/350 (47%), Gaps = 74/350 (21%)
Query: 281 FAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPS 340
F E+ + V +L+G IG +G IQ+ GV + ++ + +
Sbjct: 219 FHEEFV-VREDLMGLAIGTHGSNIQQARKVPGVTAIELDED------------------T 259
Query: 341 NNSRV-GPNAPEEKKHLDIKENSTHFSQ-----------PNSTKVQRVLVASSVVA---- 384
R+ G +A KK E F Q N +Q ++ S VV
Sbjct: 260 GTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIE 319
Query: 385 GESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYHLNYLKEVDQLRLERLQIDEQLRQI 444
G+++ +L GMVPFVFVGTK+SI N VLL+YH+ YLKEV+QLR+ERLQIDEQLRQI
Sbjct: 320 GDNEN-KLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQI 378
Query: 445 GASSRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRGHGRRGPGYTS--GTNSEASNASET 502
GSR Y RG GRRGP YTS GTNSE SN SET
Sbjct: 379 ---------------------------GSRSYSGRGRGRRGPNYTSGYGTNSELSNPSET 411
Query: 503 ESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRG-QGGRGRGGGFKGNDDHSRTDN 561
ES+ +DELSDWSLA E++R+S +R RR GG GR GGRGRGG G S
Sbjct: 412 ESERKDELSDWSLA-GEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLK 470
Query: 562 RP-RNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRTGKD 610
P NP T D + S H+ N R RT +D
Sbjct: 471 DPDSNPYSLLDNTESDQ---TADTDASESHHS---TNRRRRSRRRRTDED 514
>gi|61835148 fragile X mental retardation-related protein 1 isoform
a [Homo sapiens]
Length = 621
Score = 508 bits (1307), Expect = e-144
Identities = 247/334 (73%), Positives = 283/334 (84%)
Query: 1 MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPDRQIPFHDVRFPPPVGYNKDIN 60
M EL VEVRGSNGAFYK F+KDVHEDS+TV FENNWQP+RQ+PF++VR PPP K+I+
Sbjct: 1 MAELTVEVRGSNGAFYKGFIKDVHEDSLTVVFENNWQPERQVPFNEVRLPPPPDIKKEIS 60
Query: 61 ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP 120
E DEVEVYSRAN++EPC WWLAKVRM+KGEFYVIEYAACDATYNEIVT ERLR VN NK
Sbjct: 61 EGDEVEVYSRANDQEPCGWWLAKVRMMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKT 120
Query: 121 ATKDTFHKIKLDVPEDLRQMCAKEAAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKR 180
K+TF K +DVPEDLR+ CA E AHKDFKKAVGA + Y PE QL+ILS +E T KR
Sbjct: 121 VKKNTFFKCTVDVPEDLREACANENAHKDFKKAVGACRIFYHPETTQLMILSASEATVKR 180
Query: 181 AHMLIDMHFRSLRTKLSLIMRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN 240
++L DMH RS+RTKL L+ RNEEA+K LE ++QLA+ FHE+F+VREDLMGLAIGTHG+N
Sbjct: 181 VNILSDMHLRSIRTKLMLMSRNEEATKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSN 240
Query: 241 IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN 300
IQQARKVPGVTAI+LDEDT TF IYGE DAVKKAR FLEF ED IQVPRNLVGKVIGKN
Sbjct: 241 IQQARKVPGVTAIELDEDTGTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKN 300
Query: 301 GKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMP 334
GK+IQEIVDKSGVVRVRIE +NE +P+E+ ++P
Sbjct: 301 GKVIQEIVDKSGVVRVRIEGDNENKLPREDGMVP 334
Score = 162 bits (409), Expect = 1e-39
Identities = 132/350 (37%), Positives = 166/350 (47%), Gaps = 74/350 (21%)
Query: 281 FAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPS 340
F E+ + V +L+G IG +G IQ+ GV + ++ + +
Sbjct: 219 FHEEFV-VREDLMGLAIGTHGSNIQQARKVPGVTAIELDED------------------T 259
Query: 341 NNSRV-GPNAPEEKKHLDIKENSTHFSQ-----------PNSTKVQRVLVASSVVA---- 384
R+ G +A KK E F Q N +Q ++ S VV
Sbjct: 260 GTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIE 319
Query: 385 GESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYHLNYLKEVDQLRLERLQIDEQLRQI 444
G+++ +L GMVPFVFVGTK+SI N VLL+YH+ YLKEV+QLR+ERLQIDEQLRQI
Sbjct: 320 GDNEN-KLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQI 378
Query: 445 GASSRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRGHGRRGPGYTS--GTNSEASNASET 502
GSR Y RG GRRGP YTS GTNSE SN SET
Sbjct: 379 ---------------------------GSRSYSGRGRGRRGPNYTSGYGTNSELSNPSET 411
Query: 503 ESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRG-QGGRGRGGGFKGNDDHSRTDN 561
ES+ +DELSDWSLA E++R+S +R RR GG GR GGRGRGG G S
Sbjct: 412 ESERKDELSDWSLA-GEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLK 470
Query: 562 RP-RNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRTGKD 610
P NP T D + S H+ N R RT +D
Sbjct: 471 DPDSNPYSLLDNTESDQ---TADTDASESHHS---TNRRRRSRRRRTDED 514
>gi|4758410 fragile X mental retardation syndrome related protein 2
[Homo sapiens]
Length = 673
Score = 485 bits (1249), Expect = e-137
Identities = 237/331 (71%), Positives = 278/331 (83%)
Query: 4 LVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPDRQIPFHDVRFPPPVGYNKDINESD 63
L VEVRGSNGAFYK FVKDVHEDS+T+ FENNWQ +RQIPF DVR PPP YNK+I E D
Sbjct: 14 LPVEVRGSNGAFYKGFVKDVHEDSVTIFFENNWQSERQIPFGDVRLPPPADYNKEITEGD 73
Query: 64 EVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKPATK 123
EVEVYSRANE+EPC WWLA+VRM+KG+FYVIEYAACDATYNEIVT+ERLR VNPN ATK
Sbjct: 74 EVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACDATYNEIVTLERLRPVNPNPLATK 133
Query: 124 DTFHKIKLDVPEDLRQMCAKEAAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKRAHM 183
+F K+ + VPEDLR+ C+ E HK+FKKA+GA + + N +L ILS E KRA +
Sbjct: 134 GSFFKVTMAVPEDLREACSNENVHKEFKKALGANCIFLNITNSELFILSTTEAPVKRASL 193
Query: 184 LIDMHFRSLRTKLSLIMRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGANIQQ 243
L DMHFRSLRTKL L+ RNEEA+K LE+S+QLA+ F E+F VREDLMGLAIGTHGANIQQ
Sbjct: 194 LGDMHFRSLRTKLLLMSRNEEATKHLETSKQLAAAFQEEFTVREDLMGLAIGTHGANIQQ 253
Query: 244 ARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKNGKL 303
ARKVPGVTAI+L E+TCTF IYGE +A ++ARS+LEF+ED +QVPRNLVGKVIGKNGK+
Sbjct: 254 ARKVPGVTAIELGEETCTFRIYGETPEACRQARSYLEFSEDSVQVPRNLVGKVIGKNGKV 313
Query: 304 IQEIVDKSGVVRVRIEAENEKNVPQEEEIMP 334
IQEIVDKSGVVRVR+E +N+K P+EE ++P
Sbjct: 314 IQEIVDKSGVVRVRVEGDNDKKNPREEGMVP 344
Score = 129 bits (324), Expect = 8e-30
Identities = 99/307 (32%), Positives = 149/307 (48%), Gaps = 51/307 (16%)
Query: 264 IYGEDQDAVKKARSFLEFA---EDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEA 320
+ +++A K + + A ++ V +L+G IG +G IQ+ GV + +
Sbjct: 208 LMSRNEEATKHLETSKQLAAAFQEEFTVREDLMGLAIGTHGANIQQARKVPGVTAIELGE 267
Query: 321 ENEKNVPQEEEIMPPNSLPSNNSRVGPNAPEE----KKHLDIKENSTHFSQ--------P 368
E + R+ PE + +L+ E+S +
Sbjct: 268 E------------------TCTFRIYGETPEACRQARSYLEFSEDSVQVPRNLVGKVIGK 309
Query: 369 NSTKVQRVLVASSVVA----GESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYHLNYL 424
N +Q ++ S VV G++ K + +GMVPF+FVGT+++I+NA LL+YHL+YL
Sbjct: 310 NGKVIQEIVDKSGVVRVRVEGDNDKKNPRE-EGMVPFIFVGTRENISNAQALLEYHLSYL 368
Query: 425 KEVDQLRLERLQIDEQLRQIGASSRPPPNRT----DKEKSYVTDDGQGMGRGSR-----P 475
+EV+QLRLERLQIDEQLRQIG RPP + + Y TD+ +
Sbjct: 369 QEVEQLRLERLQIDEQLRQIGLGFRPPGSGRGSGGSDKAGYSTDESSSSSLHATRTYGGS 428
Query: 476 YRNRGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRG 535
Y RG GRR G G +S+ S ASETES+ R+E + +R+ R + RRR
Sbjct: 429 YGGRGRGRRTGGPAYGPSSDVSTASETESEKREEPN----RAGPGDRDPPTRGEESRRRP 484
Query: 536 GGGRGQG 542
GGRG+G
Sbjct: 485 TGGRGRG 491
>gi|61835172 fragile X mental retardation-related protein 1 isoform
c [Homo sapiens]
Length = 536
Score = 366 bits (939), Expect = e-101
Identities = 183/249 (73%), Positives = 209/249 (83%)
Query: 86 MIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKPATKDTFHKIKLDVPEDLRQMCAKEA 145
M+KGEFYVIEYAACDATYNEIVT ERLR VN NK K+TF K +DVPEDLR+ CA E
Sbjct: 1 MMKGEFYVIEYAACDATYNEIVTFERLRPVNQNKTVKKNTFFKCTVDVPEDLREACANEN 60
Query: 146 AHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKRAHMLIDMHFRSLRTKLSLIMRNEEA 205
AHKDFKKAVGA + Y PE QL+ILS +E T KR ++L DMH RS+RTKL L+ RNEEA
Sbjct: 61 AHKDFKKAVGACRIFYHPETTQLMILSASEATVKRVNILSDMHLRSIRTKLMLMSRNEEA 120
Query: 206 SKQLESSRQLASRFHEQFIVREDLMGLAIGTHGANIQQARKVPGVTAIDLDEDTCTFHIY 265
+K LE ++QLA+ FHE+F+VREDLMGLAIGTHG+NIQQARKVPGVTAI+LDEDT TF IY
Sbjct: 121 TKHLECTKQLAAAFHEEFVVREDLMGLAIGTHGSNIQQARKVPGVTAIELDEDTGTFRIY 180
Query: 266 GEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENEKN 325
GE DAVKKAR FLEF ED IQVPRNLVGKVIGKNGK+IQEIVDKSGVVRVRIE +NE
Sbjct: 181 GESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNENK 240
Query: 326 VPQEEEIMP 334
+P+E+ ++P
Sbjct: 241 LPREDGMVP 249
Score = 162 bits (409), Expect = 1e-39
Identities = 132/350 (37%), Positives = 166/350 (47%), Gaps = 74/350 (21%)
Query: 281 FAEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENEKNVPQEEEIMPPNSLPS 340
F E+ + V +L+G IG +G IQ+ GV + ++ + +
Sbjct: 134 FHEEFV-VREDLMGLAIGTHGSNIQQARKVPGVTAIELDED------------------T 174
Query: 341 NNSRV-GPNAPEEKKHLDIKENSTHFSQ-----------PNSTKVQRVLVASSVVA---- 384
R+ G +A KK E F Q N +Q ++ S VV
Sbjct: 175 GTFRIYGESADAVKKARGFLEFVEDFIQVPRNLVGKVIGKNGKVIQEIVDKSGVVRVRIE 234
Query: 385 GESQKPELKAWQGMVPFVFVGTKDSIANATVLLDYHLNYLKEVDQLRLERLQIDEQLRQI 444
G+++ +L GMVPFVFVGTK+SI N VLL+YH+ YLKEV+QLR+ERLQIDEQLRQI
Sbjct: 235 GDNEN-KLPREDGMVPFVFVGTKESIGNVQVLLEYHIAYLKEVEQLRMERLQIDEQLRQI 293
Query: 445 GASSRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRGHGRRGPGYTS--GTNSEASNASET 502
GSR Y RG GRRGP YTS GTNSE SN SET
Sbjct: 294 ---------------------------GSRSYSGRGRGRRGPNYTSGYGTNSELSNPSET 326
Query: 503 ESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRG-QGGRGRGGGFKGNDDHSRTDN 561
ES+ +DELSDWSLA E++R+S +R RR GG GR GGRGRGG G S
Sbjct: 327 ESERKDELSDWSLA-GEDDRDSRHQRDSRRRPGGRGRSVSGGRGRGGPRGGKSSISSVLK 385
Query: 562 RP-RNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRTGKD 610
P NP T D + S H+ N R RT +D
Sbjct: 386 DPDSNPYSLLDNTESDQ---TADTDASESHHS---TNRRRRSRRRRTDED 429
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 43.9 bits (102), Expect = 5e-04
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 24/143 (16%)
Query: 496 ASNASETESDHRDELSDWSL----------APTEEERESFLRR-------GDGRRRGGGG 538
+S++S+++SD D +S+W A E+E LRR RRR
Sbjct: 299 SSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERAD 358
Query: 539 RGQGGRGRGGGFKGNDDHSRTDNRPRNPREAKGR----TTDGSLQIRVDCNNERSVHTKT 594
RG+ RG GG + D R D+ P R KGR + + + E K
Sbjct: 359 RGEAERGSGG---SSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKK 415
Query: 595 LQNTSSEGSRLRTGKDRNQKKEK 617
Q++S+E +R K++ + E+
Sbjct: 416 PQSSSTEPARKPGQKEKRVRPEE 438
>gi|14249158 hepatoma-derived growth factor-related protein 2
isoform 2 [Homo sapiens]
Length = 670
Score = 43.9 bits (102), Expect = 5e-04
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 24/143 (16%)
Query: 496 ASNASETESDHRDELSDWSL----------APTEEERESFLRR-------GDGRRRGGGG 538
+S++S+++SD D +S+W A E+E LRR RRR
Sbjct: 299 SSSSSDSDSDEVDRISEWKRRDEARRRELEARRRREQEEELRRLREQEKEEKERRRERAD 358
Query: 539 RGQGGRGRGGGFKGNDDHSRTDNRPRNPREAKGR----TTDGSLQIRVDCNNERSVHTKT 594
RG+ RG GG + D R D+ P R KGR + + + E K
Sbjct: 359 RGEAERGSGG---SSGDELREDDEPVKKRGRKGRGRGPPSSSDSEPEAELEREAKKSAKK 415
Query: 595 LQNTSSEGSRLRTGKDRNQKKEK 617
Q++S+E +R K++ + E+
Sbjct: 416 PQSSSTEPARKPGQKEKRVRPEE 438
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 43.1 bits (100), Expect = 8e-04
Identities = 46/139 (33%), Positives = 57/139 (41%), Gaps = 35/139 (25%)
Query: 466 GQGMGRGSRPYRNRGHGRRG---PGYTSGTNSEASNASETESDHRDELSDWSLAPTEEER 522
G+GMGRGS R RG G G P E + E+E D+ D + R
Sbjct: 258 GRGMGRGS---RGRGRGSMGGDHPEDEEDFYEEEMDYGESEEPMGDDDYDEYSKELNQYR 314
Query: 523 ESFLRRGDG--RRRGGGGRGQG---GRGRG-GGFKG-------NDD-------------- 555
S RG G R RG G RG+G GRGRG GG +G NDD
Sbjct: 315 RSKDSRGRGLSRGRGRGSRGRGKGMGRGRGRGGSRGGMNKGGMNDDEDFYDEDMGDGGGG 374
Query: 556 --HSRTDNRPRNPREAKGR 572
SR ++P + KG+
Sbjct: 375 SYRSRDHDKPHQQSDKKGK 393
Score = 40.4 bits (93), Expect = 0.005
Identities = 36/107 (33%), Positives = 45/107 (42%), Gaps = 22/107 (20%)
Query: 465 DGQGMGRGSRP----YRNRGH--GRRGPGYTSGT-----NSEASNASETESDHRDELSDW 513
+G GRGSR YR RG G RG G G+ S + E E D +E D+
Sbjct: 232 EGSSRGRGSRGRGRGYRGRGSRGGSRGRGMGRGSRGRGRGSMGGDHPEDEEDFYEEEMDY 291
Query: 514 SLAPT----------EEERESFLRRGDGRRRG-GGGRGQGGRGRGGG 549
+ +E + R D R RG GRG+G RGRG G
Sbjct: 292 GESEEPMGDDDYDEYSKELNQYRRSKDSRGRGLSRGRGRGSRGRGKG 338
Score = 33.1 bits (74), Expect = 0.80
Identities = 35/114 (30%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
Query: 450 PPPNRTD-KEKSYVTDDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNASETESDHRD 508
PP + T +K+Y D + G Y N +G Y + E E D
Sbjct: 170 PPSHATPLPKKAYSKMDSKSYGM-YEDYENEQYGE----YEG--DEEEDMGKEDYDDFTK 222
Query: 509 ELSDWSLAPTEEERESFLR------RGDGRRRGGGGRG--QGGRGRGGGFKGND 554
EL+ + A R R RG G R G GRG +G RGRG G G D
Sbjct: 223 ELNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSRGRGMGRGSRGRGRGSMGGD 276
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 42.4 bits (98), Expect = 0.001
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 490 SGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGG---RGQGGRGR 546
S ++S+ + +++ + R +WS P++E S R R G R + GR +
Sbjct: 332 SRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQ 391
Query: 547 GGGFKGNDDHSRTDN--------RPRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNT 598
G DHSR+ + R R+P +A+ R+ S DC+ RS + ++
Sbjct: 392 SGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSR 451
Query: 599 SSEGSRLRT-GKDRNQKKEKPDS 620
S ++ R + R+ K + S
Sbjct: 452 SRSPNKARDHSRSRSPNKARDRS 474
Score = 31.2 bits (69), Expect = 3.0
Identities = 35/179 (19%), Positives = 69/179 (38%), Gaps = 12/179 (6%)
Query: 448 SRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNASETESDHR 507
SR P D+ +S + + R PY+ R R S + ++A + S + S ++
Sbjct: 416 SRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSR------SRSPNKARDHSRSRSPNK 469
Query: 508 DELSDWSLAPTEEERESFL-----RRGDGRRRGGGGRGQGGRGRGGGFKGNDDHSRTDNR 562
S +P++E S L R R R Q + R + + SR+ ++
Sbjct: 470 ARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSK 529
Query: 563 PRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRT-GKDRNQKKEKPDS 620
R R+++ + + ER + + R R+ K+R +++ + S
Sbjct: 530 ERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSS 588
Score = 30.0 bits (66), Expect = 6.8
Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 17/145 (11%)
Query: 425 KEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRGHGRR 484
KE D R + Q RQ SR P D+ +S + + + P + R R
Sbjct: 517 KERDHRRSRSPSKERQRRQ----SRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRR- 571
Query: 485 GPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQGGR 544
+ S + S + S+ RD S +P ++ G R R R
Sbjct: 572 ---WRSPSKERERRQSRSSSEERDHSR--SRSPNKQS-------GYSRPRASSKEKAHSR 619
Query: 545 GRGGGFKGNDDHSRTDNRPRNPREA 569
R +GN SRT ++ +P ++
Sbjct: 620 SRTPSKEGNHSQSRTSSKESDPSQS 644
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 41.6 bits (96), Expect = 0.002
Identities = 47/194 (24%), Positives = 70/194 (36%), Gaps = 18/194 (9%)
Query: 450 PPPNRTDKEKSYVTDDGQGMGRGSRPYRNR-GHGRRGPGYTSGTNSEASNASETESDHRD 508
PPP + ++ + G + +P + G+ G + N S A D+
Sbjct: 956 PPPTKVEELPPKPLEQGDETPKPPKPDPLKITKGKLGGPKETPPNGNLSPAPRLRRDYSY 1015
Query: 509 ELSDWSLAPTE---EERESFLRRGDGRRRGGGGRGQGGRGRG----GGFKGNDDHSRTDN 561
E + PT R + RG G R GGRG+G R R F+G+D
Sbjct: 1016 E----RVGPTSCRGRGRGEYFARGRGFRGTYGGRGRGARSREFRSYREFRGDDGRGGGTG 1071
Query: 562 RPRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRTGKDRNQKKEKPDSV 621
P +P +GRT + R + + + + Q S GS KE P
Sbjct: 1072 GPNHPPAPRGRTAS---ETRSEGSEYEEIPKRRRQRGSETGSETHESDLAPSDKEAPTPK 1128
Query: 622 DG---QQPLVNGVP 632
+G Q PL P
Sbjct: 1129 EGTLTQVPLAPPPP 1142
Score = 29.6 bits (65), Expect = 8.8
Identities = 29/104 (27%), Positives = 38/104 (36%), Gaps = 8/104 (7%)
Query: 531 GRRRGGGGRGQGGR-GRGGGFKGNDDHSRTDNRPRNPR----EAKGRTTDGSLQIRVD-- 583
G GGGG G GGR G G G K + + +RP R S R+D
Sbjct: 1409 GSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPPSSSAVFRLDQV 1468
Query: 584 -CNNERSVHTKTLQNTSSEGSRLRTGKDRNQKKEKPDSVDGQQP 626
+N + Q +S +GS G K P + G P
Sbjct: 1469 IHSNPAGIQQALAQLSSRQGSVTAPGGHPRHKPGLPQAPQGPSP 1512
>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
isoform d [Homo sapiens]
Length = 756
Score = 41.2 bits (95), Expect = 0.003
Identities = 40/155 (25%), Positives = 55/155 (35%), Gaps = 40/155 (25%)
Query: 422 NYLKEVDQLRLERLQIDEQLRQIGASSR---PPPNRTDKEKSYVTDDGQGMGRGSRPYRN 478
++L EV + L+R + D+ +RQ R PPP + + G+G G G + Y N
Sbjct: 472 DFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYEN 531
Query: 479 RGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGG 538
RG P R F RG G GG
Sbjct: 532 RG------------------------------------PPGGNRGGFQNRGGGSGGGGNY 555
Query: 539 RGQGGRGRGGGFKGND-DHSRTDNRPRNPREAKGR 572
RG R GGG+ N ++ DN N R + R
Sbjct: 556 RGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNR 590
>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
isoform a [Homo sapiens]
Length = 856
Score = 41.2 bits (95), Expect = 0.003
Identities = 40/155 (25%), Positives = 55/155 (35%), Gaps = 40/155 (25%)
Query: 422 NYLKEVDQLRLERLQIDEQLRQIGASSR---PPPNRTDKEKSYVTDDGQGMGRGSRPYRN 478
++L EV + L+R + D+ +RQ R PPP + + G+G G G + Y N
Sbjct: 572 DFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYEN 631
Query: 479 RGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGG 538
RG P R F RG G GG
Sbjct: 632 RG------------------------------------PPGGNRGGFQNRGGGSGGGGNY 655
Query: 539 RGQGGRGRGGGFKGND-DHSRTDNRPRNPREAKGR 572
RG R GGG+ N ++ DN N R + R
Sbjct: 656 RGGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNR 690
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 40.8 bits (94), Expect = 0.004
Identities = 41/151 (27%), Positives = 57/151 (37%), Gaps = 26/151 (17%)
Query: 469 MGRGSRPYRNRGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRR 528
MGR SR YR R R G S + S + S+ D R D + R R
Sbjct: 1 MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRD------RDRRRERSRS 54
Query: 529 GDGRRRGGGGRGQGGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTTDGSLQIRVDCNNER 588
D RR R + R R SR +R R R ++ R D R
Sbjct: 55 RDKRRSRSRDRKRLRRSR----------SRERDRSRERRRSRSR----------DRRRSR 94
Query: 589 SVHTKTLQNTSSEGSRLRTGKDRNQKKEKPD 619
S +SS G++ + ++R++ KEK D
Sbjct: 95 SRSRGRRSRSSSPGNKSKKTENRSRSKEKTD 125
>gi|28269693 xylosyltransferase I [Homo sapiens]
Length = 959
Score = 40.0 bits (92), Expect = 0.007
Identities = 36/109 (33%), Positives = 46/109 (42%), Gaps = 19/109 (17%)
Query: 529 GDGRRRGGGGRGQGGRGRGGGFKGNDDHSRTDNRPRNPREAKG---------RTTDGSL- 578
G G GGGGRG R RGGG G + +R P A T DG
Sbjct: 81 GGGGGGGGGGRGPQARARGGG-PGEPRGQQPASRGALPARALDPHPSPLITLETQDGYFS 139
Query: 579 -----QIRVDCNNERSVHTKTLQNTSSEGSRLRTGKDRNQKK--EKPDS 620
++R D NNE SV K +N + RT K ++Q + +KP S
Sbjct: 140 HRPKEKVRTDSNNENSV-PKDFENVDNSNFAPRTQKQKHQPELAKKPPS 187
>gi|145312259 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 39.7 bits (91), Expect = 0.009
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 225 VREDLMGLAIGTHGANIQQARKVPGVTAIDLDE----DTCTFHIYGEDQDAVKKARSFLE 280
V ++ + L IG GANI+Q RK G ID+D D I G K + +
Sbjct: 59 VPQEAVKLIIGRQGANIKQLRKQTGAR-IDVDTEDVGDERVLLISGFPVQVCKAKAAIHQ 117
Query: 281 F------AEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENE 323
+ + VP+ VG++IG+ G+ I+ I SG ++ + E+E
Sbjct: 118 ILTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASG-AKITCDKESE 165
>gi|145312270 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 39.7 bits (91), Expect = 0.009
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 225 VREDLMGLAIGTHGANIQQARKVPGVTAIDLDE----DTCTFHIYGEDQDAVKKARSFLE 280
V ++ + L IG GANI+Q RK G ID+D D I G K + +
Sbjct: 59 VPQEAVKLIIGRQGANIKQLRKQTGAR-IDVDTEDVGDERVLLISGFPVQVCKAKAAIHQ 117
Query: 281 F------AEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENE 323
+ + VP+ VG++IG+ G+ I+ I SG ++ + E+E
Sbjct: 118 ILTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASG-AKITCDKESE 165
>gi|145312256 tudor and KH domain containing isoform a [Homo
sapiens]
Length = 561
Score = 39.7 bits (91), Expect = 0.009
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 225 VREDLMGLAIGTHGANIQQARKVPGVTAIDLDE----DTCTFHIYGEDQDAVKKARSFLE 280
V ++ + L IG GANI+Q RK G ID+D D I G K + +
Sbjct: 59 VPQEAVKLIIGRQGANIKQLRKQTGAR-IDVDTEDVGDERVLLISGFPVQVCKAKAAIHQ 117
Query: 281 F------AEDVIQVPRNLVGKVIGKNGKLIQEIVDKSGVVRVRIEAENE 323
+ + VP+ VG++IG+ G+ I+ I SG ++ + E+E
Sbjct: 118 ILTENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASG-AKITCDKESE 165
>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
sapiens]
Length = 955
Score = 39.3 bits (90), Expect = 0.011
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 463 TDDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEER 522
++ G G RG+ +R RG G G G SG N+ SN ++ + +R+E +W T + +
Sbjct: 823 SERGGGRARGTFQFRARGRG-WGRGNYSGNNNNNSN-NDFQKRNREE--EWDPEYTPKSK 878
Query: 523 ESFL---RRGDGRRR---GGGGRGQGGRGRG 547
+ +L R G+G + G GRG RGRG
Sbjct: 879 KYYLHDDREGEGSDKWVSRGRGRGAFPRGRG 909
Score = 31.6 bits (70), Expect = 2.3
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 531 GRRRGGGGRGQGGRGRGGGFKGNDDH-------SRTDNRPRNPREAKGRTTDGSLQIRVD 583
GR RG GQ RG G ++ N + R +R R+P+ S D
Sbjct: 88 GRNRGFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSD 147
Query: 584 CNNERSVHTKTLQNTSSEGSRLRTGKDRNQKKEKPDSVDGQ 624
++ + +SS SR+ + K ++ K++K S D +
Sbjct: 148 KSSSDRSRRSSSSRSSSNHSRVESSKRKSAKEKKSSSKDSR 188
Score = 29.6 bits (65), Expect = 8.8
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 8/119 (6%)
Query: 457 KEKSYVTDDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNASE-TESDHRDELSDWSL 515
+E+S + G + R R +S +S + A E TE E S
Sbjct: 750 RERSAEKTEKTHKGSKKQKKHRRARDRSRSSSSSSQSSHSYKAEEYTEETEEREESTTGF 809
Query: 516 APTEEERESFL---RRGDGRRRGG---GGRGQGGRGRGGGFKGNDDHSRTDNRPRNPRE 568
+ + F+ RG GR RG RG+G GRG N+++S D + RN E
Sbjct: 810 DKSRLGTKDFVGPSERGGGRARGTFQFRARGRGW-GRGNYSGNNNNNSNNDFQKRNREE 867
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 38.9 bits (89), Expect = 0.015
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 446 ASSRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNAS--ETE 503
A+S PP + E+ + G G+ P + G T+ TN +S
Sbjct: 490 AASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPS 549
Query: 504 SDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQGGRGRG 547
+D DE+ D +E E+ RG RGGGG G G RG G
Sbjct: 550 ADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGG-GLGARGSG 592
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 38.9 bits (89), Expect = 0.015
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 446 ASSRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNAS--ETE 503
A+S PP + E+ + G G+ P + G T+ TN +S
Sbjct: 87 AASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSGGGGHSPS 146
Query: 504 SDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQGGRGRG 547
+D DE+ D +E E+ RG RGGGG G G RG G
Sbjct: 147 ADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGG-GLGARGSG 189
>gi|15011916 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 38.9 bits (89), Expect = 0.015
Identities = 19/27 (70%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Query: 528 RGDGRRRGGGGRGQGGRG--RGGGFKG 552
RG GR GGGRG GGRG RGGGF+G
Sbjct: 169 RGGGRGGRGGGRGGGGRGGGRGGGFRG 195
Score = 32.7 bits (73), Expect = 1.0
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 8/34 (23%)
Query: 527 RRGDGRRRGGGGRG-------QGGR-GRGGGFKG 552
R G G RGGGGRG +GGR G GGGF+G
Sbjct: 173 RGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRG 206
Score = 32.7 bits (73), Expect = 1.0
Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 528 RGDGRRRGGGGRGQGGRG-RGGGFKG 552
RG G R G GG G G RG RGGGF+G
Sbjct: 189 RGGGFRGGRGGGGGGFRGGRGGGFRG 214
Score = 32.0 bits (71), Expect = 1.8
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 488 YTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRR---RGGGGRGQGGR 544
Y S SE AS + + + + L P + FL R G + RGGG G+GG
Sbjct: 124 YFSVKLSENMKASSFKKLQKFYIDPYKLLPLQR----FLPRPPGEKGPPRGGGRGGRGG- 178
Query: 545 GRGGGFKG 552
GRGGG +G
Sbjct: 179 GRGGGGRG 186
>gi|9506713 nucleolar protein family A, member 1 [Homo sapiens]
Length = 217
Score = 38.9 bits (89), Expect = 0.015
Identities = 19/27 (70%), Positives = 20/27 (74%), Gaps = 2/27 (7%)
Query: 528 RGDGRRRGGGGRGQGGRG--RGGGFKG 552
RG GR GGGRG GGRG RGGGF+G
Sbjct: 169 RGGGRGGRGGGRGGGGRGGGRGGGFRG 195
Score = 32.7 bits (73), Expect = 1.0
Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 8/34 (23%)
Query: 527 RRGDGRRRGGGGRG-------QGGR-GRGGGFKG 552
R G G RGGGGRG +GGR G GGGF+G
Sbjct: 173 RGGRGGGRGGGGRGGGRGGGFRGGRGGGGGGFRG 206
Score = 32.7 bits (73), Expect = 1.0
Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 528 RGDGRRRGGGGRGQGGRG-RGGGFKG 552
RG G R G GG G G RG RGGGF+G
Sbjct: 189 RGGGFRGGRGGGGGGFRGGRGGGFRG 214
Score = 32.0 bits (71), Expect = 1.8
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Query: 488 YTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRR---RGGGGRGQGGR 544
Y S SE AS + + + + L P + FL R G + RGGG G+GG
Sbjct: 124 YFSVKLSENMKASSFKKLQKFYIDPYKLLPLQR----FLPRPPGEKGPPRGGGRGGRGG- 178
Query: 545 GRGGGFKG 552
GRGGG +G
Sbjct: 179 GRGGGGRG 186
>gi|21322252 androgen receptor isoform 1 [Homo sapiens]
Length = 920
Score = 38.1 bits (87), Expect = 0.025
Identities = 27/70 (38%), Positives = 33/70 (47%), Gaps = 14/70 (20%)
Query: 480 GHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGR 539
G G GPG SG+ S A+++S W T EE + + G G GGGG
Sbjct: 416 GAGAAGPG--SGSPSAAASSS------------WHTLFTAEEGQLYGPCGGGGGGGGGGG 461
Query: 540 GQGGRGRGGG 549
G GG G GGG
Sbjct: 462 GGGGGGGGGG 471
>gi|239753353 PREDICTED: hypothetical protein [Homo sapiens]
Length = 448
Score = 37.7 bits (86), Expect = 0.032
Identities = 33/106 (31%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 479 RGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEE-------RESFLRRGDG 531
R G RG G GT + ASE R A R+ L G G
Sbjct: 19 RVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASISRDPALSPGRG 78
Query: 532 RRRGGGGRGQGGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTTDGS 577
RR+ G G+G + RGG D R++ RP REA + GS
Sbjct: 79 RRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPF--REAFAKLLSGS 122
>gi|239747921 PREDICTED: hypothetical protein XP_002346480 [Homo
sapiens]
Length = 448
Score = 37.7 bits (86), Expect = 0.032
Identities = 33/106 (31%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 479 RGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEE-------RESFLRRGDG 531
R G RG G GT + ASE R A R+ L G G
Sbjct: 19 RVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASISRDPALSPGRG 78
Query: 532 RRRGGGGRGQGGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTTDGS 577
RR+ G G+G + RGG D R++ RP REA + GS
Sbjct: 79 RRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPF--REAFAKLLSGS 122
>gi|239741815 PREDICTED: hypothetical protein XP_002342320 [Homo
sapiens]
Length = 448
Score = 37.7 bits (86), Expect = 0.032
Identities = 33/106 (31%), Positives = 41/106 (38%), Gaps = 9/106 (8%)
Query: 479 RGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEE-------RESFLRRGDG 531
R G RG G GT + ASE R A R+ L G G
Sbjct: 19 RVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASISRDPALSPGRG 78
Query: 532 RRRGGGGRGQGGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTTDGS 577
RR+ G G+G + RGG D R++ RP REA + GS
Sbjct: 79 RRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPF--REAFAKLLSGS 122
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 37.7 bits (86), Expect = 0.032
Identities = 44/187 (23%), Positives = 61/187 (32%), Gaps = 28/187 (14%)
Query: 451 PPNRTDKEKSYVTDDGQGMGRGSR--------PYRNRGHGRRGPGYTSGTNSEASNASET 502
PPN + V G G R S P G G G SG+ S +S +
Sbjct: 201 PPNFGTNTQGAVAQPGYGSVRASNQNEGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSN 260
Query: 503 ESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQGG------------RGRGGGF 550
++ S S + + S G GG RG G G GG
Sbjct: 261 GDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGS 320
Query: 551 KGNDDHSRTDNRPRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSRLRTGKD 610
G + H +P N EA+G G R + ++ S EG+RL G
Sbjct: 321 GGGNGHKPGCEKPGN--EARGSGESGIQGFR------GQGVSSNMREISKEGNRLLGGSG 372
Query: 611 RNQKKEK 617
N + +
Sbjct: 373 DNYRNSE 379
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 37.4 bits (85), Expect = 0.042
Identities = 45/179 (25%), Positives = 62/179 (34%), Gaps = 51/179 (28%)
Query: 447 SSRPPPNRTDKEKSYVTDDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNASETESDH 506
++RPPP G G SR R+R GR GPG+ G + A A
Sbjct: 239 AARPPP-------------APGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGR 285
Query: 507 RDELSDWSLAPTEEERESF---------LRRGDGRRRGG------GGRGQ------GGRG 545
+ P+ ++++ LRRGD R G G G+ R
Sbjct: 286 NPGALGRAAPPSRARQDAWGLSGCATVGLRRGDCDRAGSSQPPATSGNGERCRFCRRRRR 345
Query: 546 RGGGFKGNDDHSRTDNRPRNPREAKGRTTDGSLQIRVDCNNERSVHTKTLQNTSSEGSR 604
RGGG +G H+ P GR ++ V L+ S EGSR
Sbjct: 346 RGGGGEGEGTHA-----THGPASPPGR------------RHDEEVGAAVLRAGSGEGSR 387
>gi|12056465 fibrillarin [Homo sapiens]
Length = 321
Score = 37.4 bits (85), Expect = 0.042
Identities = 19/28 (67%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Query: 527 RRGDGRRRGGGGRGQ--GGRGRGGGFKG 552
R G G R G GGRG GGRGRGGGF+G
Sbjct: 15 RGGFGDRGGRGGRGGFGGGRGRGGGFRG 42
Score = 35.8 bits (81), Expect = 0.12
Identities = 16/22 (72%), Positives = 16/22 (72%)
Query: 528 RGDGRRRGGGGRGQGGRGRGGG 549
RG GR GGGG G GG GRGGG
Sbjct: 41 RGRGRGGGGGGGGGGGGGRGGG 62
Score = 34.7 bits (78), Expect = 0.27
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 525 FLRRGDGRRRGGGGRGQGGRGRGGGFKGNDDHSRTDNRPRNPREAK 570
F RG G GGGG G GGRG GGGF + R R + K
Sbjct: 40 FRGRGRGGGGGGGGGGGGGRG-GGGFHSGGNRGRGRGGKRGNQSGK 84
Score = 33.5 bits (75), Expect = 0.61
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 529 GDGRRRGGGGRGQG------GRGRGGGFKGNDDHSRTDNRPRNPREAKGRTTDGSLQI 580
G GR RGGG RG+G G G GGG +G NR R +G + ++ +
Sbjct: 31 GGGRGRGGGFRGRGRGGGGGGGGGGGGGRGGGGFHSGGNRGRGRGGKRGNQSGKNVMV 88
Score = 29.6 bits (65), Expect = 8.8
Identities = 17/28 (60%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 527 RRGDGRRRGGGGRGQG--GRGRGGGFKG 552
R G G GG GRG G GRGRGGG G
Sbjct: 24 RGGRGGFGGGRGRGGGFRGRGRGGGGGG 51
>gi|5031923 meiotic recombination 11 homolog A isoform 1 [Homo
sapiens]
Length = 708
Score = 37.0 bits (84), Expect = 0.055
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 30/205 (14%)
Query: 401 FVFVGTKDSIANATVLLDYHLN----YLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTD 456
FV KD+I L+ Y L +LKE LE +IDE++R+ + + N D
Sbjct: 461 FVDKEEKDAIEE---LVKYQLEKTQRFLKERHIDALED-KIDEEVRRFRETRQKNTNEED 516
Query: 457 KEKSYVTDDGQGMGRGSRPYRNRGHGRRGPGYTSGTNSEASNASETESDHRDELSDWSLA 516
E + M R +R R++ + E+++A + +L++
Sbjct: 517 DEVR------EAMTR-ARALRSQ-------------SEESASAFSADDLMSIDLAEQMAN 556
Query: 517 PTEEERESFLRRGDGRRRGG-GGRGQGGRGRGGGFKGNDDHS-RTDNRPRNPREAKGRTT 574
+++ + +G GR RG GGRGQ RGG +G D T R RN + A +
Sbjct: 557 DSDDSISAATNKGRGRGRGRRGGRGQNSASRGGSQRGRADTGLETSTRSRNSKTAVSASR 616
Query: 575 DGSLQIRVDCNNERSVHTKTLQNTS 599
+ S+ ++ T +N S
Sbjct: 617 NMSIIDAFKSTRQQPSRNVTTKNYS 641
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.132 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,758,379
Number of Sequences: 37866
Number of extensions: 1277447
Number of successful extensions: 7840
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 188
Number of HSP's that attempted gapping in prelim test: 6017
Number of HSP's gapped (non-prelim): 1358
length of query: 632
length of database: 18,247,518
effective HSP length: 108
effective length of query: 524
effective length of database: 14,157,990
effective search space: 7418786760
effective search space used: 7418786760
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.