Guide to the Human Genome
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Name: F10 Sequence: fasta or formatted (488aa) NCBI GI: 4503625
Description:

coagulation factor X preproprotein

Referenced in:

Coagulation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         29           2
 C cysteine            4.9         24           1
 D aspartate           5.5         27           1
 E glutamate           9.0         44           2
 F phenylalanine       4.3         21           1
 G glycine             8.2         40           2
 H histidine           1.8          9           1
 I isoleucine          3.7         18           2
 K lysine              6.8         33           2
 L leucine             8.0         39           4
 M methionine          1.6          8           1
 N asparagine          4.3         21           2
 P proline             3.9         19           1
 Q glutamine           3.9         19           1
 R arginine            5.9         29           2
 S serine              5.9         29           3
 T threonine           7.4         36           1
 V valine              4.7         23           2
 W tryptophan          1.2          6           1
 Y tyrosine            2.9         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coagulation factor X preproprotein 
F9                    0.372   coagulation factor IX preproprotein 
F7                    0.335   coagulation factor VII isoform b precursor 
F7                    0.332   coagulation factor VII isoform a precursor 
PROC                  0.288   protein C 
PROZ                  0.167   protein Z, vitamin K-dependent plasma glycoprotein [H...
F2                    0.150   coagulation factor II preproprotein 
TMPRSS13              0.128   transmembrane protease, serine 13 
UNQ9391               0.127   hypothetical protein LOC203074 
PRSS2                 0.126   protease, serine, 2 preproprotein 
PRSS1                 0.125   protease, serine, 1 preproprotein 
TMPRSS6               0.125   transmembrane protease, serine 6 
TMPRSS9               0.124   transmembrane protease, serine 9 
PRSS3                 0.123   mesotrypsin isoform 2 preproprotein 
KLKB1                 0.122   plasma kallikrein B1 precursor 
PRSS3                 0.121   mesotrypsin isoform 1 preproprotein 
TMPRSS2               0.119   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.119   transmembrane protease, serine 2 isoform 2 
PRSS12                0.119   neurotrypsin precursor 
PRSS27                0.118   marapsin 
MASP2                 0.117   mannan-binding lectin serine protease 2 isoform 1 pr...
PRSS8                 0.117   prostasin preproprotein 
TMPRSS5               0.117   transmembrane protease, serine 5 
TMPRSS3               0.116   transmembrane protease, serine 3 isoform 1 
ST14                  0.116   matriptase 
C1R                   0.115   complement component 1, r subcomponent 
HABP2                 0.115   hyaluronan binding protein 2 preproprotein 
F11                   0.115   coagulation factor XI precursor 
OVCH1                 0.114   ovochymase 1 
TMPRSS11D             0.113   transmembrane protease, serine 11D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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