Guide to the Human Genome
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Name: F2 Sequence: fasta or formatted (622aa) NCBI GI: 4503635
Description:

coagulation factor II preproprotein

Referenced in:

Coagulation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         42           2
 C cysteine            4.2         26           1
 D aspartate           5.6         35           1
 E glutamate           8.2         51           3
 F phenylalanine       3.4         21           2
 G glycine             7.9         49           2
 H histidine           2.1         13           1
 I isoleucine          3.5         22           1
 K lysine              4.7         29           2
 L leucine             8.2         51           2
 M methionine          1.4          9           1
 N asparagine          4.0         25           2
 P proline             5.3         33           2
 Q glutamine           4.2         26           2
 R arginine            7.1         44           2
 S serine              6.1         38           2
 T threonine           5.8         36           2
 V valine              5.9         37           2
 W tryptophan          2.3         14           1
 Y tyrosine            3.4         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coagulation factor II preproprotein 
PLG                   0.169   plasminogen 
LPA                   0.166   lipoprotein Lp(a) precursor 
PROC                  0.120   protein C 
F10                   0.116   coagulation factor X preproprotein 
F9                    0.106   coagulation factor IX preproprotein 
TMPRSS6               0.103   transmembrane protease, serine 6 
HGF                   0.102   hepatocyte growth factor isoform 3 precursor 
HGF                   0.102   hepatocyte growth factor isoform 1 preproprotein [Ho...
HGFAC                 0.102   HGF activator preproprotein 
TMPRSS9               0.100   transmembrane protease, serine 9 
ST14                  0.098   matriptase 
PRSS8                 0.097   prostasin preproprotein 
F7                    0.097   coagulation factor VII isoform b precursor 
F7                    0.097   coagulation factor VII isoform a precursor 
PRSS7                 0.096   enterokinase precursor 
KLKB1                 0.095   plasma kallikrein B1 precursor 
MASP1                 0.095   mannan-binding lectin serine protease 1 isoform 1 pr...
PRSS27                0.095   marapsin 
UNQ9391               0.093   hypothetical protein LOC203074 
PRSS21                0.092   testisin isoform 1 
PRSS21                0.091   testisin isoform 2 
C1R                   0.090   complement component 1, r subcomponent 
HPN                   0.090   hepsin 
HPN                   0.090   hepsin 
HABP2                 0.090   hyaluronan binding protein 2 preproprotein 
TMPRSS11B             0.089   transmembrane protease, serine 11B 
PRSS2                 0.089   protease, serine, 2 preproprotein 
PRSS1                 0.087   protease, serine, 1 preproprotein 
CTRL                  0.087   chymotrypsin-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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