Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: F7 Sequence: fasta or formatted (444aa) NCBI GI: 10518503
Description:

coagulation factor VII isoform b precursor

Referenced in:

Coagulation

Other entries for this name:
alt prot [466aa] coagulation factor VII isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         25           2
 C cysteine            5.9         26           1
 D aspartate           4.5         20           2
 E glutamate           6.5         29           2
 F phenylalanine       3.2         14           1
 G glycine             9.0         40           2
 H histidine           3.2         14           1
 I isoleucine          3.8         17           2
 K lysine              3.8         17           1
 L leucine            10.6         47           3
 M methionine          1.1          5           1
 N asparagine          2.9         13           1
 P proline             4.7         21           1
 Q glutamine           5.2         23           2
 R arginine            6.5         29           4
 S serine              6.8         30           2
 T threonine           5.2         23           2
 V valine              7.0         31           2
 W tryptophan          1.8          8           1
 Y tyrosine            2.7         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coagulation factor VII isoform b precursor 
F7                    0.986   coagulation factor VII isoform a precursor 
F10                   0.366   coagulation factor X preproprotein 
F9                    0.364   coagulation factor IX preproprotein 
PROC                  0.315   protein C 
PROZ                  0.166   protein Z, vitamin K-dependent plasma glycoprotein [H...
KLKB1                 0.163   plasma kallikrein B1 precursor 
PRSS8                 0.158   prostasin preproprotein 
F11                   0.156   coagulation factor XI precursor 
TMPRSS6               0.156   transmembrane protease, serine 6 
PRSS7                 0.147   enterokinase precursor 
TMPRSS2               0.147   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.147   transmembrane protease, serine 2 isoform 2 
TMPRSS9               0.146   transmembrane protease, serine 9 
PRSS2                 0.142   protease, serine, 2 preproprotein 
TMPRSS13              0.140   transmembrane protease, serine 13 
HGFAC                 0.140   HGF activator preproprotein 
PRSS3                 0.136   mesotrypsin isoform 1 preproprotein 
PRSS3                 0.136   mesotrypsin isoform 2 preproprotein 
UNQ9391               0.136   hypothetical protein LOC203074 
PLG                   0.136   plasminogen 
F2                    0.136   coagulation factor II preproprotein 
TMPRSS11A             0.135   transmembrane protease, serine 11A isoform 2 
TMPRSS11A             0.135   transmembrane protease, serine 11A isoform 1 
PRSS27                0.135   marapsin 
PRSS22                0.134   protease, serine, 22 
TMPRSS11D             0.134   transmembrane protease, serine 11D 
HPN                   0.133   hepsin 
HPN                   0.133   hepsin 
PRSS36                0.133   protease, serine, 36 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press