Guide to the Human Genome
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Name: F9 Sequence: fasta or formatted (461aa) NCBI GI: 4503649
Description:

coagulation factor IX preproprotein

Referenced in:

Coagulation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         22           2
 C cysteine            5.2         24           1
 D aspartate           4.1         19           2
 E glutamate           9.3         43           2
 F phenylalanine       4.6         21           1
 G glycine             7.8         36           2
 H histidine           2.2         10           2
 I isoleucine          5.4         25           2
 K lysine              6.1         28           1
 L leucine             6.1         28           2
 M methionine          1.3          6           1
 N asparagine          6.9         32           2
 P proline             3.3         15           1
 Q glutamine           3.0         14           1
 R arginine            4.3         20           1
 S serine              5.9         27           1
 T threonine           6.7         31           2
 V valine              8.0         37           2
 W tryptophan          1.5          7           1
 Y tyrosine            3.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coagulation factor IX preproprotein 
F10                   0.392   coagulation factor X preproprotein 
F7                    0.351   coagulation factor VII isoform b precursor 
F7                    0.344   coagulation factor VII isoform a precursor 
PROC                  0.274   protein C 
PROZ                  0.175   protein Z, vitamin K-dependent plasma glycoprotein [H...
PRSS2                 0.161   protease, serine, 2 preproprotein 
KLKB1                 0.161   plasma kallikrein B1 precursor 
PRSS1                 0.155   protease, serine, 1 preproprotein 
ST14                  0.153   matriptase 
PRSS3                 0.151   mesotrypsin isoform 1 preproprotein 
PRSS3                 0.151   mesotrypsin isoform 2 preproprotein 
TMPRSS9               0.144   transmembrane protease, serine 9 
F2                    0.144   coagulation factor II preproprotein 
OVCH1                 0.143   ovochymase 1 
PRSS8                 0.142   prostasin preproprotein 
MASP1                 0.142   mannan-binding lectin serine protease 1 isoform 2 pr...
PRSS7                 0.139   enterokinase precursor 
PRSS27                0.138   marapsin 
HABP2                 0.138   hyaluronan binding protein 2 preproprotein 
F11                   0.138   coagulation factor XI precursor 
TMPRSS2               0.133   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.133   transmembrane protease, serine 2 isoform 2 
TMPRSS11E             0.133   transmembrane protease, serine 11E 
TMPRSS11E2            0.133   transmembrane protease, serine 11E2 
KLK11                 0.132   kallikrein 11 isoform 1 preproprotein 
KLK11                 0.132   kallikrein 11 isoform 2 precursor 
KLK11                 0.132   kallikrein 11 isoform 1 preproprotein 
KLK13                 0.131   kallikrein 13 precursor 
MASP2                 0.131   mannan-binding lectin serine protease 2 isoform 1 pr...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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