Guide to the Human Genome
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Name: LIFR Sequence: fasta or formatted (1097aa) NCBI GI: 189083786
Description:

leukemia inhibitory factor receptor precursor

Referenced in:

Fibronectin Family
Interleukins and Their Receptors

Other entries for this name:
alt mRNA [1097aa] leukemia inhibitory factor receptor precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         47           2
 C cysteine            2.3         25           2
 D aspartate           5.2         57           2
 E glutamate           7.0         77           3
 F phenylalanine       3.3         36           2
 G glycine             4.9         54           3
 H histidine           1.9         21           2
 I isoleucine          7.5         82           2
 K lysine              6.2         68           2
 L leucine             7.5         82           2
 M methionine          1.6         18           2
 N asparagine          6.6         72           2
 P proline             6.2         68           2
 Q glutamine           3.3         36           2
 R arginine            3.8         42           1
 S serine              9.7        106           2
 T threonine           6.1         67           2
 V valine              6.9         76           3
 W tryptophan          2.4         26           1
 Y tyrosine            3.4         37           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leukemia inhibitory factor receptor precursor [Homo... 
LIFR                  1.000   leukemia inhibitory factor receptor precursor 
OSMR                  0.173   oncostatin M receptor 
IL6ST                 0.073   interleukin 6 signal transducer isoform 1 precursor ...
IL31RA                0.049   gp130-like monocyte receptor 
IL12RB2               0.045   interleukin 12 receptor, beta 2 precursor 
CSF3R                 0.035   colony stimulating factor 3 receptor isoform d precu...
CSF3R                 0.035   colony stimulating factor 3 receptor isoform c precu...
CSF3R                 0.035   colony stimulating factor 3 receptor isoform a precur...
CSF3R                 0.032   colony stimulating factor 3 receptor isoform b precu...
IL6ST                 0.026   interleukin 6 signal transducer isoform 2 precursor ...
LEPR                  0.022   leptin receptor isoform 3 
LEPR                  0.022   leptin receptor isoform 2 
LEPR                  0.022   leptin receptor isoform 1 
PTPRD                 0.019   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.019   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.019   protein tyrosine phosphatase, receptor type, D isofo...
NRCAM                 0.018   neuronal cell adhesion molecule isoform B precursor ...
FNDC1                 0.017   fibronectin type III domain containing 1 
CHL1                  0.017   cell adhesion molecule with homology to L1CAM precur...
CRLF1                 0.017   cytokine receptor-like factor 1 
NRCAM                 0.017   neuronal cell adhesion molecule isoform A precursor ...
PTPRF                 0.017   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.017   protein tyrosine phosphatase, receptor type, F isof...
IL23R                 0.017   interleukin 23 receptor precursor 
PTPRD                 0.015   protein tyrosine phosphatase, receptor type, D isof...
PTPRD                 0.015   protein tyrosine phosphatase, receptor type, D isofo...
CNTN3                 0.015   contactin 3 
PTPRQ                 0.015   protein tyrosine phosphatase, receptor type, Q [Hom...
PTPRS                 0.013   protein tyrosine phosphatase, receptor type, sigma ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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