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Search of human proteins with 4503031
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503031 CASP2 and RIPK1 domain containing adaptor with death
domain [Homo sapiens]
(199 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503031 CASP2 and RIPK1 domain containing adaptor with death ... 397 e-111
gi|39995059 caspase 2 isoform 1 preproprotein [Homo sapiens] 47 1e-05
gi|39995061 caspase 2 isoform 3 [Homo sapiens] 44 7e-05
gi|154448890 THO complex 1 [Homo sapiens] 37 0.011
gi|188595682 ankyrin 2 isoform 3 [Homo sapiens] 36 0.025
gi|52426737 ankyrin 2 isoform 2 [Homo sapiens] 36 0.025
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 36 0.025
gi|4502379 B-cell CLL/lymphoma 10 [Homo sapiens] 35 0.032
gi|4505229 Fas-associated via death domain [Homo sapiens] 34 0.072
gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo sa... 33 0.12
gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo sap... 33 0.12
gi|61742786 leucine rich repeat and death domain containing prot... 31 0.61
gi|61742784 leucine rich repeat and death domain containing prot... 31 0.61
gi|61742782 leucine rich repeat and death domain containing prot... 31 0.61
gi|224494026 tumor necrosis factor receptor superfamily, member ... 29 3.0
gi|224494019 tumor necrosis factor receptor superfamily, member ... 29 3.0
gi|7662404 caspase recruitment domain family, member 8 [Homo sap... 29 3.0
gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens] 29 3.0
gi|148596998 coiled-coil domain containing 122 [Homo sapiens] 29 3.0
gi|16554562 caspase recruitment domain protein 9 isoform 2 [Homo... 28 3.9
gi|47717131 caspase recruitment domain protein 9 isoform 1 [Homo... 28 3.9
gi|169202863 PREDICTED: hypothetical protein [Homo sapiens] 28 5.1
gi|239744373 PREDICTED: hypothetical protein XP_002343130 [Homo ... 28 5.1
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi... 28 5.1
gi|55749600 spire homolog 2 [Homo sapiens] 28 5.1
gi|226246554 hypothetical protein LOC643677 [Homo sapiens] 28 6.7
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap... 28 6.7
gi|51093861 caspase recruitment domain protein 10 [Homo sapiens] 27 8.8
>gi|4503031 CASP2 and RIPK1 domain containing adaptor with death
domain [Homo sapiens]
Length = 199
Score = 397 bits (1019), Expect = e-111
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI 60
MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI
Sbjct: 1 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI 60
Query: 61 LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGDRLTGIPSHILNSSPSDRQI 120
LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGDRLTGIPSHILNSSPSDRQI
Sbjct: 61 LPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAGDRLTGIPSHILNSSPSDRQI 120
Query: 121 NQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL 180
NQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL
Sbjct: 121 NQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL 180
Query: 181 HNGLRAVEVDPSLLLHMLE 199
HNGLRAVEVDPSLLLHMLE
Sbjct: 181 HNGLRAVEVDPSLLLHMLE 199
>gi|39995059 caspase 2 isoform 1 preproprotein [Homo sapiens]
Length = 452
Score = 46.6 bits (109), Expect = 1e-05
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 1 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI 60
M ++ L+ R+ L ++L+ L L++L ++ I+T + I A+ + + LL++
Sbjct: 32 MHPHHQETLKKNRVVLAKQLLLSEL-LEHLLEKDIITLEMRELIQAKVGSFSQNVELLNL 90
Query: 61 LPSRGPKAFDTFLDSLQE 78
LP RGP+AFD F ++L+E
Sbjct: 91 LPKRGPQAFDAFCEALRE 108
>gi|39995061 caspase 2 isoform 3 [Homo sapiens]
Length = 108
Score = 44.3 bits (103), Expect = 7e-05
Identities = 24/76 (31%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 1 MEARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI 60
M ++ L+ R+ L ++L+ L L++L ++ I+T + I A+ + + LL++
Sbjct: 32 MHPHHQETLKKNRVVLAKQLLLSEL-LEHLLEKDIITLEMRELIQAKVGSFSQNVELLNL 90
Query: 61 LPSRGPKAFDTFLDSL 76
LP RGP+AFD F ++L
Sbjct: 91 LPKRGPQAFDAFCEAL 106
>gi|154448890 THO complex 1 [Homo sapiens]
Length = 657
Score = 37.0 bits (84), Expect = 0.011
Identities = 33/160 (20%), Positives = 70/160 (43%), Gaps = 12/160 (7%)
Query: 36 LTENHIQEINAQTTGLRKTMLLLDILP------SRGPKAFDTFLDSL-----QEFPWVRE 84
+ EN + +N G R LL P ++ K+ +L+++ +E P E
Sbjct: 479 MVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSE 538
Query: 85 KLKKAREEAMTDLPAGDRLTGIPSHILNSSPSDRQINQLAQRLGPEWEPMVLSLGLSQTD 144
++K +E D A + P + + QI A +LG +W+ + L + ++
Sbjct: 539 EIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSE 598
Query: 145 IYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSLHNGL 184
I + + + +++ + + + W+ + G AT ++L N L
Sbjct: 599 IRQIECD-SEDMKMRAKQLLVAWQDQEGVHATPENLINAL 637
>gi|188595682 ankyrin 2 isoform 3 [Homo sapiens]
Length = 1863
Score = 35.8 bits (81), Expect = 0.025
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 117 DRQINQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQAT 176
+ ++ +A LG W + L ++ I++ + +P+++Q Q W +R GK AT
Sbjct: 1476 EERLAYIADHLGFSWTELARELDFTEEQIHQIRIENPNSLQDQSHALLKYWLERDGKHAT 1535
Query: 177 FQSLHNGLRAVEVDPSLLLHMLE 199
+L L +++ ++H++E
Sbjct: 1536 DTNLVECL--TKINRMDIVHLME 1556
>gi|52426737 ankyrin 2 isoform 2 [Homo sapiens]
Length = 1872
Score = 35.8 bits (81), Expect = 0.025
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 117 DRQINQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQAT 176
+ ++ +A LG W + L ++ I++ + +P+++Q Q W +R GK AT
Sbjct: 1485 EERLAYIADHLGFSWTELARELDFTEEQIHQIRIENPNSLQDQSHALLKYWLERDGKHAT 1544
Query: 177 FQSLHNGLRAVEVDPSLLLHMLE 199
+L L +++ ++H++E
Sbjct: 1545 DTNLVECL--TKINRMDIVHLME 1565
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 35.8 bits (81), Expect = 0.025
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 117 DRQINQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQAT 176
+ ++ +A LG W + L ++ I++ + +P+++Q Q W +R GK AT
Sbjct: 3570 EERLAYIADHLGFSWTELARELDFTEEQIHQIRIENPNSLQDQSHALLKYWLERDGKHAT 3629
Query: 177 FQSLHNGLRAVEVDPSLLLHMLE 199
+L L +++ ++H++E
Sbjct: 3630 DTNLVECL--TKINRMDIVHLME 3650
>gi|4502379 B-cell CLL/lymphoma 10 [Homo sapiens]
Length = 233
Score = 35.4 bits (80), Expect = 0.032
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 6 KQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDILPSRG 65
K L +LR+ L +++ E +L + IL+ +EI+ +T+ ++ LLD L
Sbjct: 18 KDALENLRVYLCEKIIAERH-FDHLRAKKILSREDTEEISCRTSSRKRAGKLLDYL-QEN 75
Query: 66 PKAFDTFLDSLQEFPWVREKLKKAREEAMTD 96
PK DT ++S++ REK + + +TD
Sbjct: 76 PKGLDTLVESIR-----REKTQNFLIQKITD 101
>gi|4505229 Fas-associated via death domain [Homo sapiens]
Length = 208
Score = 34.3 bits (77), Expect = 0.072
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 121 NQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL 180
N + +G +W + L +S T I + +P N+ +V E+ W+ + AT L
Sbjct: 102 NVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHL 161
Query: 181 HNGLRAVEVD 190
LR+ +++
Sbjct: 162 VGALRSCQMN 171
>gi|33946285 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 33.5 bits (75), Expect = 0.12
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 2 EARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDIL 61
E+ D ++R R+ L + +L L GI+ E I +T + L+D +
Sbjct: 440 ESNDLLLIRKNRMALFQHLTCVIPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTI 499
Query: 62 PSRGPKAFDTFLDSLQEFP-------WVREKLKKAREEAMTDLPAGDRL 103
+G A F +SLQE +V++ +K E ++DLP ++L
Sbjct: 500 LVKGNIAATVFRNSLQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQL 548
>gi|4502139 baculoviral IAP repeat-containing protein 3 [Homo
sapiens]
Length = 604
Score = 33.5 bits (75), Expect = 0.12
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 2 EARDKQVLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDIL 61
E+ D ++R R+ L + +L L GI+ E I +T + L+D +
Sbjct: 440 ESNDLLLIRKNRMALFQHLTCVIPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTI 499
Query: 62 PSRGPKAFDTFLDSLQEFP-------WVREKLKKAREEAMTDLPAGDRL 103
+G A F +SLQE +V++ +K E ++DLP ++L
Sbjct: 500 LVKGNIAATVFRNSLQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQL 548
>gi|61742786 leucine rich repeat and death domain containing protein
isoform 3 [Homo sapiens]
Length = 893
Score = 31.2 bits (69), Expect = 0.61
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 123 LAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQR 170
+A RLG +W + L LG+S ++ R + ++ Q+ W +R
Sbjct: 778 VAGRLGLDWPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLFSWAER 825
>gi|61742784 leucine rich repeat and death domain containing protein
isoform 1 [Homo sapiens]
Length = 910
Score = 31.2 bits (69), Expect = 0.61
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 123 LAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQR 170
+A RLG +W + L LG+S ++ R + ++ Q+ W +R
Sbjct: 795 VAGRLGLDWPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLFSWAER 842
>gi|61742782 leucine rich repeat and death domain containing protein
isoform 2 [Homo sapiens]
Length = 753
Score = 31.2 bits (69), Expect = 0.61
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 123 LAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQR 170
+A RLG +W + L LG+S ++ R + ++ Q+ W +R
Sbjct: 638 VAGRLGLDWPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLFSWAER 685
>gi|224494026 tumor necrosis factor receptor superfamily, member 10b
isoform 2 precursor [Homo sapiens]
Length = 411
Score = 28.9 bits (63), Expect = 3.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 131 WEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSLHNGLRAV 187
WEP++ LGL +I KA + + + I+W + G+ A+ +L + L +
Sbjct: 325 WEPLMRKLGLMDNEIKVAKAEAAGH-RDTLYTMLIKWVNKTGRDASVHTLLDALETL 380
>gi|224494019 tumor necrosis factor receptor superfamily, member 10b
isoform 1 precursor [Homo sapiens]
Length = 440
Score = 28.9 bits (63), Expect = 3.0
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 131 WEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSLHNGLRAV 187
WEP++ LGL +I KA + + + I+W + G+ A+ +L + L +
Sbjct: 354 WEPLMRKLGLMDNEIKVAKAEAAGH-RDTLYTMLIKWVNKTGRDASVHTLLDALETL 409
>gi|7662404 caspase recruitment domain family, member 8 [Homo
sapiens]
Length = 431
Score = 28.9 bits (63), Expect = 3.0
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 26 VLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDILPSRGPKAFDTFLDSLQE 78
VL L +LTEN + + + T K LL ++ +G A D S+ E
Sbjct: 365 VLDDLQDNEVLTENEKELVEQEKTRQSKNEALLSMVEKKGDLALDVLFRSISE 417
>gi|126507091 LATS, large tumor suppressor, homolog 2 [Homo sapiens]
Length = 1088
Score = 28.9 bits (63), Expect = 3.0
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 74 DSLQEFPWVREKLKKAREEAMTDLPAGDRL-TGIPSHILNSSPSDRQINQLAQRLGPEWE 132
+S Q +RE LK+ + ++ LPAG T + + +L S + RQ Q+ R P++
Sbjct: 14 NSRQRLQEIREGLKQPSKSSVQGLPAGPNSDTSLDAKVLGSKDATRQQQQM--RATPKFG 71
Query: 133 P 133
P
Sbjct: 72 P 72
>gi|148596998 coiled-coil domain containing 122 [Homo sapiens]
Length = 273
Score = 28.9 bits (63), Expect = 3.0
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 71 TFLDSLQEFPWVREKLKKAREEAMTDL--PAGDRLTGIPSHILN 112
+F+ L E +KLK +EE M DL P G+R+T + I N
Sbjct: 147 SFMTELHEKRDFVKKLKTMKEELMQDLQNPGGNRITQVQEDITN 190
>gi|16554562 caspase recruitment domain protein 9 isoform 2 [Homo
sapiens]
Length = 492
Score = 28.5 bits (62), Expect = 3.9
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 8 VLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGL---RKTMLLLDILPSR 64
VL R+ L V+ + YL Q +L + +++ + + RK +LLDIL
Sbjct: 13 VLEGFRVTL-TSVIDPSRITPYLRQCKVLNPDDEEQVLSDPNLVIRKRKVGVLLDILQRT 71
Query: 65 GPKAFDTFLDSLQ 77
G K + FL+SL+
Sbjct: 72 GHKGYVAFLESLE 84
>gi|47717131 caspase recruitment domain protein 9 isoform 1 [Homo
sapiens]
Length = 536
Score = 28.5 bits (62), Expect = 3.9
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 8 VLRSLRLELGAEVLVEGLVLQYLYQEGILTENHIQEINAQTTGL---RKTMLLLDILPSR 64
VL R+ L V+ + YL Q +L + +++ + + RK +LLDIL
Sbjct: 13 VLEGFRVTL-TSVIDPSRITPYLRQCKVLNPDDEEQVLSDPNLVIRKRKVGVLLDILQRT 71
Query: 65 GPKAFDTFLDSLQ 77
G K + FL+SL+
Sbjct: 72 GHKGYVAFLESLE 84
>gi|169202863 PREDICTED: hypothetical protein [Homo sapiens]
Length = 527
Score = 28.1 bits (61), Expect = 5.1
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 141 SQTDIYRCKANHPHNVQSQVVEA-FIRWRQRFGKQATFQSLHNGLRAVEVDPSL 193
S T++YR + P Q + + I W+Q+ Q +SL G+RA S+
Sbjct: 160 SYTNVYRIFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGIRAAAFSNSV 213
>gi|239744373 PREDICTED: hypothetical protein XP_002343130 [Homo
sapiens]
Length = 339
Score = 28.1 bits (61), Expect = 5.1
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 141 SQTDIYRCKANHPHNVQSQVVEA-FIRWRQRFGKQATFQSLHNGLRAVEVDPSL 193
S T++YR + P Q + + I W+Q+ Q +SL G+RA S+
Sbjct: 107 SYTNVYRVFSKDPQKSQEVLKNSEIINWKQKLQIQGFQESLGEGIRAAAFSNSV 160
>gi|148727368 bromodomain and PHD finger containing, 3 [Homo
sapiens]
Length = 1205
Score = 28.1 bits (61), Expect = 5.1
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 82 VREKLKKAREEAMTDLPAGDRLTG---IPSHILN---SSPSDRQINQLAQRLGPEW 131
+++K+KK EEA D P+ + IPS+ LN S S ++ NQ QRL W
Sbjct: 452 LKQKIKKEPEEAGQDTPSTLPMLAVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYW 507
>gi|55749600 spire homolog 2 [Homo sapiens]
Length = 714
Score = 28.1 bits (61), Expect = 5.1
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 41 IQEINAQTTGLRKTMLLLDILPSRGPKAFDTFLDSLQEFPWVREKLKKAREEAMTDLPAG 100
+Q+I A+ LRK M+ DI P A + LD ++ R LK+ E + LP
Sbjct: 283 MQDIRARNYKLRKVMVDGDIPPRVKKDAHELILDFIRS----RPPLKQVSERRLRPLPPK 338
Query: 101 DRLTGIPSHILNSSPSDRQI 120
R + IL +R++
Sbjct: 339 QR--SLHEKILEEIKQERRL 356
>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
Length = 7081
Score = 27.7 bits (60), Expect = 6.7
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
Query: 22 VEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI-LPSRGPKAFDTFLDSLQEFP 80
+E L+ Q ++ + H I + G ++ LDI L S+G F T LD+ Q+
Sbjct: 2960 LEFLIAQRAKEKDVGIAKHSVSIPWEREGSKR----LDIPLNSKGQNIFFTELDTSQQKT 3015
Query: 81 WVREKLKKAREEAMTDLPAGDRLTGIPSHILN----SSPSDRQINQ--LAQRLGPEWEPM 134
++L K + +MT+L + P H+ N + D IN+ + LG E
Sbjct: 3016 CQEQELLKQEDISMTNLGSMACPIMEPLHLENTGKVTEEEDVYINRKISSHVLGKE---- 3071
Query: 135 VLSLGLSQTDIY 146
GL +TDI+
Sbjct: 3072 ----GLKETDIF 3079
>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 27.7 bits (60), Expect = 6.7
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 19/132 (14%)
Query: 22 VEGLVLQYLYQEGILTENHIQEINAQTTGLRKTMLLLDI-LPSRGPKAFDTFLDSLQEFP 80
+E L+ Q ++ + H I + G ++ LDI L S+G F T LD+ Q+
Sbjct: 2889 LEFLIAQRAKEKDVGIAKHSVSIPWEREGSKR----LDIPLNSKGQNIFFTELDTSQQKT 2944
Query: 81 WVREKLKKAREEAMTDLPAGDRLTGIPSHILN----SSPSDRQINQ--LAQRLGPEWEPM 134
++L K + +MT+L + P H+ N + D IN+ + LG E
Sbjct: 2945 CQEQELLKQEDISMTNLGSMACPIMEPLHLENTGKVTEEEDVYINRKISSHVLGKE---- 3000
Query: 135 VLSLGLSQTDIY 146
GL +TDI+
Sbjct: 3001 ----GLKETDIF 3008
>gi|51093861 caspase recruitment domain protein 10 [Homo sapiens]
Length = 1032
Score = 27.3 bits (59), Expect = 8.8
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 18 AEVLVEGLVLQYLYQEGILTENHIQEINAQ---TTGLRKTMLLLDILPSRGPKAFDTFLD 74
A L + YL Q ++ E +E+ + + +T L+DIL RG + ++ FL+
Sbjct: 39 ARALNPAKLTPYLRQCRVIDEQDEEEVLSTYRFPCRVNRTGRLMDILRCRGKRGYEAFLE 98
Query: 75 SLQ 77
+L+
Sbjct: 99 ALE 101
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,888,492
Number of Sequences: 37866
Number of extensions: 276681
Number of successful extensions: 777
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 763
Number of HSP's gapped (non-prelim): 30
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.