Guide to the Human Genome
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Name: CRADD Sequence: fasta or formatted (199aa) NCBI GI: 4503031
Description:

CASP2 and RIPK1 domain containing adaptor with death domain

Referenced in:

Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         12           1
 C cysteine            0.5          1           1
 D aspartate           4.5          9           1
 E glutamate           8.0         16           2
 F phenylalanine       3.0          6           1
 G glycine             5.5         11           1
 H histidine           3.0          6           1
 I isoleucine          4.5          9           1
 K lysine              4.0          8           2
 L leucine            15.6         31           3
 M methionine          2.5          5           1
 N asparagine          3.5          7           1
 P proline             5.0         10           1
 Q glutamine           7.5         15           1
 R arginine            7.5         15           1
 S serine              6.0         12           2
 T threonine           4.5          9           2
 V valine              5.5         11           2
 W tryptophan          1.5          3           1
 Y tyrosine            1.5          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CASP2 and RIPK1 domain containing adaptor with death ... 
CASP2                 0.059   caspase 2 isoform 1 preproprotein 
CASP2                 0.051   caspase 2 isoform 3 
THOC1                 0.032   THO complex 1 
ANK2                  0.030   ankyrin 2 isoform 3 
ANK2                  0.030   ankyrin 2 isoform 2 
ANK2                  0.030   ankyrin 2 isoform 1 
BCL10                 0.027   B-cell CLL/lymphoma 10 
FADD                  0.024   Fas-associated via death domain 
BIRC3                 0.022   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.022   baculoviral IAP repeat-containing protein 3 
LRDD                  0.016   leucine rich repeat and death domain containing prot...
LRDD                  0.016   leucine rich repeat and death domain containing prot...
LRDD                  0.016   leucine rich repeat and death domain containing prot...
TNFRSF10B             0.011   tumor necrosis factor receptor superfamily, member ...
TNFRSF10B             0.011   tumor necrosis factor receptor superfamily, member ...
CARD8                 0.011   caspase recruitment domain family, member 8 
LATS2                 0.011   LATS, large tumor suppressor, homolog 2 
CCDC122               0.011   coiled-coil domain containing 122 
CARD9                 0.008   caspase recruitment domain protein 9 isoform 2 [Homo...
CARD9                 0.008   caspase recruitment domain protein 9 isoform 1 [Homo...
LOC643637             0.008   PREDICTED: hypothetical protein 
LOC100287520          0.008   PREDICTED: hypothetical protein XP_002343130 
BRPF3                 0.008   bromodomain and PHD finger containing, 3 
SPIRE2                0.008   spire homolog 2 
LOC643677             0.008   hypothetical protein LOC643677 
LOC643677             0.008   PREDICTED: hypothetical protein LOC643677 
CARD10                0.005   caspase recruitment domain protein 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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