Guide to the Human Genome
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Name: BCL10 Sequence: fasta or formatted (233aa) NCBI GI: 4502379
Description:

B-cell CLL/lymphoma 10

Referenced in:

B cells
BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9          9           1
 C cysteine            2.1          5           1
 D aspartate           4.7         11           1
 E glutamate          11.2         26           3
 F phenylalanine       3.4          8           2
 G glycine             3.9          9           1
 H histidine           1.7          4           1
 I isoleucine          3.9          9           2
 K lysine              6.4         15           2
 L leucine            12.4         29           2
 M methionine          1.3          3           1
 N asparagine          5.2         12           2
 P proline             6.9         16           2
 Q glutamine           2.1          5           1
 R arginine            7.3         17           2
 S serine             10.7         25           2
 T threonine           8.2         19           2
 V valine              3.4          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B-cell CLL/lymphoma 10 
CRADD                 0.023   CASP2 and RIPK1 domain containing adaptor with death ...
CEL                   0.023   carboxyl ester lipase precursor 
CARD14                0.018   caspase recruitment domain protein 14 isoform 1 [Hom...
CKAP4                 0.016   cytoskeleton-associated protein 4 
MUC5B                 0.016   mucin 5, subtype B, tracheobronchial 
CARD9                 0.016   caspase recruitment domain protein 9 isoform 2 [Homo...
CARD9                 0.016   caspase recruitment domain protein 9 isoform 1 [Homo...
FAM59A                0.014   hypothetical protein LOC64762 
LOC645202             0.014   PREDICTED: hypothetical protein LOC645202 
LOC100292670          0.011   PREDICTED: similar to CYorf16 protein 
LOC100289265          0.011   PREDICTED: hypothetical protein 
LOC100289265          0.011   PREDICTED: hypothetical protein XP_002344242 
KIAA0240              0.011   hypothetical protein LOC23506 
LOC727832             0.011   golgi autoantigen, golgin subfamily a-like 
LOC283767             0.011   golgi autoantigen, golgin subfamily a-like 
LOC440243             0.011   PREDICTED: Putative golgin subfamily A member 6-lik...
C11orf63              0.011   hypothetical protein LOC79864 isoform 2 
C11orf63              0.011   hypothetical protein LOC79864 isoform 1 
ABCA5                 0.011   ATP-binding cassette, sub-family A , member 5 
ABCA5                 0.011   ATP-binding cassette, sub-family A , member 5 
LRRCC1                0.011   sodium channel associated protein 2 isoform b [Homo...
LRRCC1                0.011   sodium channel associated protein 2 isoform a [Homo...
CWF19L1               0.011   CWF19-like 1, cell cycle control 
HAUS3                 0.009   HAUS augmin-like complex, subunit 3 
PLEKHA4               0.009   pleckstrin homology domain containing family A memb...
PLEKHA4               0.009   pleckstrin homology domain containing family A memb...
EP400                 0.009   E1A binding protein p400 
ARHGEF18              0.009   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.009   Rho/Rac guanine nucleotide exchange factor 18 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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