Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CARD10 Sequence: fasta or formatted (1032aa) NCBI GI: 51093861
Description:

caspase recruitment domain protein 10

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         84           2
 C cysteine            2.5         26           1
 D aspartate           4.2         43           1
 E glutamate          11.4        118           3
 F phenylalanine       1.4         14           1
 G glycine             6.9         71           2
 H histidine           1.5         15           1
 I isoleucine          2.4         25           1
 K lysine              3.8         39           2
 L leucine            13.4        138           3
 M methionine          1.2         12           1
 N asparagine          1.6         17           1
 P proline             6.5         67           3
 Q glutamine           6.4         66           3
 R arginine           10.3        106           2
 S serine              7.8         81           6
 T threonine           2.7         28           2
 V valine              4.8         50           2
 W tryptophan          1.6         16           1
 Y tyrosine            1.6         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   caspase recruitment domain protein 10 
CARD11                0.236   caspase recruitment domain family, member 11 
CARD14                0.137   caspase recruitment domain protein 14 isoform 1 [Hom...
CARD9                 0.128   caspase recruitment domain protein 9 isoform 1 [Homo...
CARD9                 0.127   caspase recruitment domain protein 9 isoform 2 [Homo...
CARD14                0.037   caspase recruitment domain protein 14 isoform 2 [Hom...
TCHH                  0.023   trichohyalin 
CEP250                0.022   centrosomal protein 2 
CCDC88B               0.022   coiled-coil domain containing 88 
GOLGB1                0.021   golgi autoantigen, golgin subfamily b, macrogolgin ...
CROCC                 0.020   ciliary rootlet coiled-coil 
MAD1L1                0.020   MAD1-like 1 protein 
MAD1L1                0.020   MAD1-like 1 protein 
MAD1L1                0.020   MAD1-like 1 protein 
LOC100133220          0.019   PREDICTED: hypothetical protein 
CCDC18                0.019   sarcoma antigen NY-SAR-41 
INCENP                0.018   inner centromere protein antigens 135/155kDa isofor...
NUMA1                 0.018   nuclear mitotic apparatus protein 1 
MYH7B                 0.018   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH3                  0.018   myosin, heavy chain 3, skeletal muscle, embryonic [H...
CGN                   0.018   cingulin 
MYO18A                0.018   myosin 18A isoform b 
MYO18A                0.018   myosin 18A isoform a 
MYH8                  0.018   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH14                 0.018   myosin, heavy chain 14 isoform 1 
MYH14                 0.018   myosin, heavy chain 14 isoform 2 
MYH14                 0.018   myosin, heavy chain 14 isoform 3 
CCDC123               0.018   coiled-coil domain containing 123 
GIGYF2                0.017   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.017   GRB10 interacting GYF protein 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press