Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4502073
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502073 amelogenin, Y-linked precursor [Homo sapiens]
(192 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502073 amelogenin, Y-linked precursor [Homo sapiens] 423 e-119
gi|4502071 amelogenin (X chromosome) isoform 1 precursor [Homo s... 376 e-105
gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo ... 367 e-102
gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo ... 328 2e-90
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 63 1e-10
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 60 1e-09
gi|195232763 ADAM metallopeptidase domain 29 preproprotein [Homo... 59 3e-09
gi|195232761 ADAM metallopeptidase domain 29 preproprotein [Homo... 59 3e-09
gi|195232759 ADAM metallopeptidase domain 29 preproprotein [Homo... 59 3e-09
gi|73765552 ADAM metallopeptidase domain 29 preproprotein [Homo ... 59 3e-09
gi|117938768 GNAS complex locus alex [Homo sapiens] 59 3e-09
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 57 1e-08
gi|50345997 E1A binding protein p300 [Homo sapiens] 53 2e-07
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 52 4e-07
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 52 4e-07
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 52 4e-07
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 52 4e-07
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 51 5e-07
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 51 5e-07
gi|5174545 myocyte enhancer factor 2D [Homo sapiens] 51 7e-07
gi|90903231 huntingtin [Homo sapiens] 50 2e-06
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 50 2e-06
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 49 2e-06
gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo ... 49 3e-06
gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo ... 49 3e-06
gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo ... 49 3e-06
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 48 4e-06
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 48 4e-06
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 48 6e-06
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 48 6e-06
>gi|4502073 amelogenin, Y-linked precursor [Homo sapiens]
Length = 192
Score = 423 bits (1088), Expect = e-119
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MGTWILFACLVGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSMIRPPYSSYGYEPMGG 60
MGTWILFACLVGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSMIRPPYSSYGYEPMGG
Sbjct: 1 MGTWILFACLVGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSMIRPPYSSYGYEPMGG 60
Query: 61 WLHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNL 120
WLHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNL
Sbjct: 61 WLHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNL 120
Query: 121 PLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLHLEAW 180
PLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLHLEAW
Sbjct: 121 PLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLHLEAW 180
Query: 181 PATDKTKQEEVD 192
PATDKTKQEEVD
Sbjct: 181 PATDKTKQEEVD 192
>gi|4502071 amelogenin (X chromosome) isoform 1 precursor [Homo
sapiens]
Length = 191
Score = 376 bits (966), Expect = e-105
Identities = 169/192 (88%), Positives = 179/192 (93%), Gaps = 1/192 (0%)
Query: 1 MGTWILFACLVGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSMIRPPYSSYGYEPMGG 60
MGTWILFACL+GAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQS IRPPY SYGYEPMGG
Sbjct: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQS-IRPPYPSYGYEPMGG 59
Query: 61 WLHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNL 120
WLHHQIIPV+SQQHP THTLQ HHHIPVVPAQQP + QQ +MPVPGQ SMTP QHHQPNL
Sbjct: 60 WLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNL 119
Query: 121 PLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLHLEAW 180
P PAQQP+QPQPVQPQPHQPMQPQPPV PMQPL PQPPLPPMFP++PLPP+LPDL LEAW
Sbjct: 120 PPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAW 179
Query: 181 PATDKTKQEEVD 192
P+TDKTK+EEVD
Sbjct: 180 PSTDKTKREEVD 191
>gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo
sapiens]
Length = 205
Score = 367 bits (941), Expect = e-102
Identities = 169/206 (82%), Positives = 179/206 (86%), Gaps = 15/206 (7%)
Query: 1 MGTWILFACLVGAAFAMPLPPHPGHPGYINFSYE--------------VLTPLKWYQSMI 46
MGTWILFACL+GAAFAMPLPPHPGHPGYINFSYE VLTPLKWYQS I
Sbjct: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQS-I 59
Query: 47 RPPYSSYGYEPMGGWLHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPG 106
RPPY SYGYEPMGGWLHHQIIPV+SQQHP THTLQ HHHIPVVPAQQP + QQ +MPVPG
Sbjct: 60 RPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPG 119
Query: 107 QQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLR 166
Q SMTP QHHQPNLP PAQQP+QPQPVQPQPHQPMQPQPPV PMQPL PQPPLPPMFP++
Sbjct: 120 QHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQ 179
Query: 167 PLPPILPDLHLEAWPATDKTKQEEVD 192
PLPP+LPDL LEAWP+TDKTK+EEVD
Sbjct: 180 PLPPMLPDLTLEAWPSTDKTKREEVD 205
>gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo
sapiens]
Length = 175
Score = 328 bits (840), Expect = 2e-90
Identities = 153/192 (79%), Positives = 163/192 (84%), Gaps = 17/192 (8%)
Query: 1 MGTWILFACLVGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSMIRPPYSSYGYEPMGG 60
MGTWILFACL+GAAFAMP VLTPLKWYQS IRPPY SYGYEPMGG
Sbjct: 1 MGTWILFACLLGAAFAMP----------------VLTPLKWYQS-IRPPYPSYGYEPMGG 43
Query: 61 WLHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNL 120
WLHHQIIPV+SQQHP THTLQ HHHIPVVPAQQP + QQ +MPVPGQ SMTP QHHQPNL
Sbjct: 44 WLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNL 103
Query: 121 PLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLHLEAW 180
P PAQQP+QPQPVQPQPHQPMQPQPPV PMQPL PQPPLPPMFP++PLPP+LPDL LEAW
Sbjct: 104 PPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAW 163
Query: 181 PATDKTKQEEVD 192
P+TDKTK+EEVD
Sbjct: 164 PSTDKTKREEVD 175
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 63.2 bits (152), Expect = 1e-10
Identities = 55/159 (34%), Positives = 70/159 (44%), Gaps = 29/159 (18%)
Query: 20 PPHPGHPGYINFSYEVLT--PLKWYQSMIRPPYSSYGYEPMGGWLHHQIIPVVSQQHPLT 77
PP P P +N S+ V T PL + Q P ++ G +P V ++ P+
Sbjct: 483 PPPPPPPTLLNSSHPVPTQSPLPFTQP--GPAFNQQGQQP-----------VFPRERPVR 529
Query: 78 HTLQSHHHIPVVPAQQPRVR--------QQALMPVPGQQSMTPTQHHQPNL--PL--PAQ 125
LQ + ++ QP +Q +P PGQ + PT H QPNL PL P
Sbjct: 530 PALQPPGPVGILHFSQPGSATTRPFIPPRQPFLPGPGQPFL-PT-HTQPNLQGPLHPPLP 587
Query: 126 QPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFP 164
P QPQP QPQ P Q QPP QP PQ PP P
Sbjct: 588 PPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQHP 626
Score = 42.4 bits (98), Expect = 2e-04
Identities = 37/111 (33%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 68 PVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPL--PAQ 125
P QQ P+ Q P++P Q P P P Q P Q P + + P
Sbjct: 324 PPPPQQQPIRSLFQPQPLQPLLPVQHPH------HPSPPQGMHMPPQLETPRMMMTPPPV 377
Query: 126 QPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQP--PLPPMFPLR-PLPPILP 173
P QP+ + PH PVQ PLLP P P P + P R P PP P
Sbjct: 378 TPQQPKNIHINPHFKGTVVTPVQ--VPLLPVPSQPRPAVGPQRFPGPPEFP 426
Score = 42.0 bits (97), Expect = 3e-04
Identities = 34/110 (30%), Positives = 44/110 (40%), Gaps = 29/110 (26%)
Query: 69 VVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQP- 127
V Q+ T + H P + QP V QA P P P P QQP
Sbjct: 288 VGDQRRESTERGRMKDHRPALLPTQPPVVPQAPPPPP---------------PPPQQQPI 332
Query: 128 ---FQPQPVQP-----QPHQPMQPQ-----PPVQPMQPLLPQPPLPPMFP 164
FQPQP+QP PH P PQ P ++ + ++ PP+ P P
Sbjct: 333 RSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLETPRMMMTPPPVTPQQP 382
Score = 40.0 bits (92), Expect = 0.001
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 106 GQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPL 165
G Q T+ + PA P QP PV PQ P P P QP++ L PL P+ P+
Sbjct: 289 GDQRRESTERGRMKDHRPALLPTQP-PVVPQAPPPPPPPPQQQPIRSLFQPQPLQPLLPV 347
Query: 166 R----PLPP 170
+ P PP
Sbjct: 348 QHPHHPSPP 356
Score = 36.2 bits (82), Expect = 0.018
Identities = 30/104 (28%), Positives = 37/104 (35%), Gaps = 7/104 (6%)
Query: 64 HQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLP 123
HQ P QHP H HHH VP LMP+ Q Q QP
Sbjct: 619 HQPPPQHPPQHPPQHQHHHHHHHLSVPPPP-------LMPMSQPQFRPHVQTAQPQASSS 671
Query: 124 AQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRP 167
Q Q Q ++ + P+Q MQP P+ P+ P
Sbjct: 672 RMQCPQRQGLRHNTTSQNVSKRPMQQMQPTAPRNSNLRELPIAP 715
Score = 30.0 bits (66), Expect = 1.3
Identities = 35/111 (31%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 63 HHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPL 122
HH P P T + P V QQP+ + P +TP Q P LP+
Sbjct: 351 HHPSPPQGMHMPPQLETPRMMMTPPPVTPQQPK--NIHINPHFKGTVVTPVQ--VPLLPV 406
Query: 123 PAQQPFQPQP-VQPQ--PHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPP 170
P+Q P+P V PQ P P PQ P+ QPP P+ PP
Sbjct: 407 PSQ----PRPAVGPQRFPGPPEFPQHTPGPVPNSFSQPPRLPLQDQWRAPP 453
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 59.7 bits (143), Expect = 1e-09
Identities = 52/140 (37%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 67 IPVVSQQHPLTHTLQSHHHI------PVVPAQQPRVRQQALMPVPGQ--QSM--TPTQHH 116
IP+++ P L H + PV PA P++ + P P Q+M TP Q
Sbjct: 884 IPLLAVAPPGVAALSIHSAVAQLPGQPVYPAAFPQMAPTDVPPSPHHTVQNMRATPPQPA 943
Query: 117 QPNLP-LPAQQPFQPQPVQPQ----PHQPMQPQPPVQPMQPLL-PQPPLPPM--FPLRPL 168
P P LP Q PQP P P QP +P PV P QP+L PQP LPP P+RP
Sbjct: 944 LPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVLPPQPALPVRP- 1002
Query: 169 PPILPDLHLEAWPATDKTKQ 188
P+ P L +A PA Q
Sbjct: 1003 EPLQPHLPEQAAPAATPGSQ 1022
Score = 51.2 bits (121), Expect = 5e-07
Identities = 39/99 (39%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 87 PVVPAQQPRVRQQA--LMPVPGQQSMTPTQHHQPNLP---LPAQQPFQPQPVQP--QPHQ 139
P P QQP Q L V Q + P Q P+LP PA Q P ++P P
Sbjct: 724 PAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMPQA 783
Query: 140 PMQPQPPVQPMQPLLPQPPLPPMFPLR---PLPPILPDL 175
P+QP V P P P P +PP+ PL LPP LPDL
Sbjct: 784 PLQPLAQVPPQMP--PIPVVPPITPLAGIDGLPPALPDL 820
Score = 50.8 bits (120), Expect = 7e-07
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 16/102 (15%)
Query: 87 PVVPAQQPRV---RQQALMP------VPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQP 137
PV+P P + +Q P VP Q H P+ P + P P P P P
Sbjct: 660 PVLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSLQQHFPD-PAMSFAPVLPPPSTPMP 718
Query: 138 HQPMQPQPPVQPMQPLLPQPPLP------PMFPLRPLPPILP 173
P QP PP Q PL PLP P+ PL+P+PP LP
Sbjct: 719 TGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLP 760
Score = 47.4 bits (111), Expect = 8e-06
Identities = 41/134 (30%), Positives = 52/134 (38%), Gaps = 30/134 (22%)
Query: 78 HTLQSHHHIPVVPA--QQPRVRQQALMP----VPGQQSMTPTQHHQPNLPLPAQQPFQPQ 131
HT+Q+ P PA QP + Q ++P +P Q + P P LP Q PQ
Sbjct: 930 HTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQ 989
Query: 132 PVQP------------QPHQPMQPQPPVQPMQPLL------------PQPPLPPMFPLRP 167
PV P QPH P Q P P +L Q P P+ P
Sbjct: 990 PVLPPQPALPVRPEPLQPHLPEQAAPAATPGSQILLGHPAPYAVDVAAQVPTVPVPPAAV 1049
Query: 168 LPPILPDLHLEAWP 181
L P LP++ L A P
Sbjct: 1050 LSPPLPEVLLPAAP 1063
Score = 45.8 bits (107), Expect = 2e-05
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 11/114 (9%)
Query: 65 QIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNL---P 121
Q+ P+ Q PL Q +P +P P + P+ G + P P P
Sbjct: 774 QLKPLQMPQAPLQPLAQVPPQMPPIPVVPP------ITPLAGIDGLPPALPDLPTATVPP 827
Query: 122 LPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPL-LPQPPLPPM-FPLRPLPPILP 173
+P Q F P + P P+ P P P+Q + LP PP P+ P R + P P
Sbjct: 828 VPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHPPGAPLAMPCRTIVPNAP 881
Score = 35.4 bits (80), Expect = 0.030
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 22/135 (16%)
Query: 23 PGHPGYINFSYEVL--TPLKWYQSMIRPPYSSYGYEPMGGWLHHQIIPVVSQQHPLTHTL 80
P G I F++++ TP + Q MI G+ H + +V++ L
Sbjct: 490 PKDNGAIEFTFDLEKETPDEVAQEMIE-----------SGFFHESDVKIVAKSIRDRVAL 538
Query: 81 QSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQP 140
+ PA QP+ +Q +P + P +PL Q + Q QP P +P
Sbjct: 539 IQWRRERIWPALQPKEQQDV---------GSPDKARGPPVPLQVQVTYHAQAGQPGPPEP 589
Query: 141 MQPQPPVQPMQPLLP 155
+P+ + P LP
Sbjct: 590 EEPEADQHLLPPTLP 604
Score = 32.3 bits (72), Expect = 0.25
Identities = 46/162 (28%), Positives = 55/162 (33%), Gaps = 19/162 (11%)
Query: 16 AMPLPPHPGHPGYINFSYEVLTPLKWYQSMIRPPYSSYGYEPMGGWLHHQIIPVVSQQHP 75
A P P P P + P S + P S + G + + P
Sbjct: 1379 APPAPLAPSSPPVTALPQDGAAPAT---STMPEPASGTASQAGGPGTPQGLTSELETSQP 1435
Query: 76 LTHTLQSHHHIPVVPAQQPRVRQQA-LMPVPGQQSMTPTQHHQPNLPLPAQQPFQ----P 130
L T H P+ A QP V A P P S + LP PA +P P
Sbjct: 1436 LAET----HEAPL--AVQPLVVGLAPCTPAPEAASTRDASAPREPLPPPAPEPSPHSGTP 1489
Query: 131 QPVQPQPHQPMQPQP--PVQPMQPLLPQPPLPPMFPLRPLPP 170
QP QP P+ P V LP PPL P P P PP
Sbjct: 1490 QPALGQP-APLLPAAVGAVSLATSQLPSPPLGPTVP--PQPP 1528
Score = 28.9 bits (63), Expect = 2.8
Identities = 25/92 (27%), Positives = 30/92 (32%), Gaps = 5/92 (5%)
Query: 82 SHHHIPVVPAQQPRVRQQALMPVPGQQSMTP----TQHHQPNLPLPAQQPFQPQPVQPQP 137
+ H P P P + +L P Q S + QP+ Q Q P P P
Sbjct: 1319 AEHPAPEAPESSPPLPLSSLPPEASQDSAPYKDQLSSKEQPSFLASQQLLSQAGPSNP-P 1377
Query: 138 HQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLP 169
P P P P LPQ P P P
Sbjct: 1378 GAPPAPLAPSSPPVTALPQDGAAPATSTMPEP 1409
>gi|195232763 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.9 bits (141), Expect = 3e-09
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 68 PVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQP 127
P+ QQ T + + I P + P Q +MP Q +TP+Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 128 FQPQPVQPQPHQPMQPQPPVQPMQ---PLLPQPPLPPMFPLRPLPPILP 173
P QP+ P Q QPPV P Q L P PP+ P + P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 38.5 bits (88), Expect = 0.004
Identities = 31/84 (36%), Positives = 36/84 (42%), Gaps = 17/84 (20%)
Query: 71 SQQHPLTHTLQSHHHIPVVPAQ-QPRVR----QQALMPVPGQQSMTPTQHHQPNLPLPAQ 125
SQ HP + S PV P+Q QPRV Q +MP +TP+Q
Sbjct: 748 SQSHP--QVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSHPQLTPSQSQ--------- 796
Query: 126 QPFQPQPVQPQPHQPMQPQPPVQP 149
P P QPQ P Q QPPV P
Sbjct: 797 PPVTPSQRQPQ-LMPSQSQPPVTP 819
>gi|195232761 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.9 bits (141), Expect = 3e-09
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 68 PVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQP 127
P+ QQ T + + I P + P Q +MP Q +TP+Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 128 FQPQPVQPQPHQPMQPQPPVQPMQ---PLLPQPPLPPMFPLRPLPPILP 173
P QP+ P Q QPPV P Q L P PP+ P + P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 38.5 bits (88), Expect = 0.004
Identities = 31/84 (36%), Positives = 36/84 (42%), Gaps = 17/84 (20%)
Query: 71 SQQHPLTHTLQSHHHIPVVPAQ-QPRVR----QQALMPVPGQQSMTPTQHHQPNLPLPAQ 125
SQ HP + S PV P+Q QPRV Q +MP +TP+Q
Sbjct: 748 SQSHP--QVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSHPQLTPSQSQ--------- 796
Query: 126 QPFQPQPVQPQPHQPMQPQPPVQP 149
P P QPQ P Q QPPV P
Sbjct: 797 PPVTPSQRQPQ-LMPSQSQPPVTP 819
>gi|195232759 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.9 bits (141), Expect = 3e-09
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 68 PVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQP 127
P+ QQ T + + I P + P Q +MP Q +TP+Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 128 FQPQPVQPQPHQPMQPQPPVQPMQ---PLLPQPPLPPMFPLRPLPPILP 173
P QP+ P Q QPPV P Q L P PP+ P + P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 38.5 bits (88), Expect = 0.004
Identities = 31/84 (36%), Positives = 36/84 (42%), Gaps = 17/84 (20%)
Query: 71 SQQHPLTHTLQSHHHIPVVPAQ-QPRVR----QQALMPVPGQQSMTPTQHHQPNLPLPAQ 125
SQ HP + S PV P+Q QPRV Q +MP +TP+Q
Sbjct: 748 SQSHP--QVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSHPQLTPSQSQ--------- 796
Query: 126 QPFQPQPVQPQPHQPMQPQPPVQP 149
P P QPQ P Q QPPV P
Sbjct: 797 PPVTPSQRQPQ-LMPSQSQPPVTP 819
>gi|73765552 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.9 bits (141), Expect = 3e-09
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 68 PVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQP 127
P+ QQ T + + I P + P Q +MP Q +TP+Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 128 FQPQPVQPQPHQPMQPQPPVQPMQ---PLLPQPPLPPMFPLRPLPPILP 173
P QP+ P Q QPPV P Q L P PP+ P + P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 38.5 bits (88), Expect = 0.004
Identities = 31/84 (36%), Positives = 36/84 (42%), Gaps = 17/84 (20%)
Query: 71 SQQHPLTHTLQSHHHIPVVPAQ-QPRVR----QQALMPVPGQQSMTPTQHHQPNLPLPAQ 125
SQ HP + S PV P+Q QPRV Q +MP +TP+Q
Sbjct: 748 SQSHP--QVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSHPQLTPSQSQ--------- 796
Query: 126 QPFQPQPVQPQPHQPMQPQPPVQP 149
P P QPQ P Q QPPV P
Sbjct: 797 PPVTPSQRQPQ-LMPSQSQPPVTP 819
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 58.5 bits (140), Expect = 3e-09
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 87 PVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPP 146
P++ QP+ +P PGQ T H +P P Q P PQP+ P P +P+ PQP
Sbjct: 338 PILTPGQPQK-----IPTPGQHQPILTPGHSQPIPTPGQ-PLPPQPI-PTPGRPLTPQPI 390
Query: 147 VQPMQPLLPQPPLPPMFPLRPLPPI 171
P +PL PQP P PLR PP+
Sbjct: 391 PTPGRPLTPQPIQMPGRPLRLPPPL 415
Score = 52.4 bits (124), Expect = 2e-07
Identities = 44/123 (35%), Positives = 55/123 (44%), Gaps = 19/123 (15%)
Query: 66 IIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQ--QALMP----VPGQQSMTPTQ-HHQP 118
++P +++PL T P+ P Q R+ Q L P PGQ PT HQP
Sbjct: 303 LMPRREEKYPLRGT------DPLPPGQPQRIPLPGQPLQPQPILTPGQPQKIPTPGQHQP 356
Query: 119 NLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLHLE 178
L P QP+ P P QP+ PQP P +PL PQP P PL P P +P L
Sbjct: 357 ILT-----PGHSQPI-PTPGQPLPPQPIPTPGRPLTPQPIPTPGRPLTPQPIQMPGRPLR 410
Query: 179 AWP 181
P
Sbjct: 411 LPP 413
Score = 48.5 bits (114), Expect = 3e-06
Identities = 46/126 (36%), Positives = 59/126 (46%), Gaps = 33/126 (26%)
Query: 65 QIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPA 124
Q IP Q P+ L H P+ QP Q +P PG+ +TP QP +P P
Sbjct: 346 QKIPTPGQHQPI---LTPGHSQPIPTPGQPLPPQP--IPTPGRP-LTP----QP-IPTPG 394
Query: 125 QQPFQPQPVQPQPHQPMQPQPPV------QPMQPLL--------PQPPLPPMFP------ 164
+ P PQP+Q P +P++ PP+ QPM P L PQP LPP P
Sbjct: 395 R-PLTPQPIQ-MPGRPLRLPPPLRLLRPGQPMSPQLRQTQGLPLPQPLLPPGQPKSAGRP 452
Query: 165 LRPLPP 170
L+PLPP
Sbjct: 453 LQPLPP 458
Score = 33.9 bits (76), Expect = 0.087
Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 20/101 (19%)
Query: 105 PGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLP-PMF 163
PGQ M+P LPLP QP P +P+QP PP P + PP P
Sbjct: 420 PGQP-MSPQLRQTQGLPLP--QPLLPPGQPKSAGRPLQPLPP-GPDARSISDPPAPRSRL 475
Query: 164 PLRPLPPILPDL---------------HLEAWPATDKTKQE 189
P+R L +L L ++ WPA T E
Sbjct: 476 PIRLLRGLLARLPGGASPRAAAAAACTTMKGWPAATMTPAE 516
Score = 33.1 bits (74), Expect = 0.15
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 125 QQPFQPQPVQPQPHQPMQPQPPVQPM------QPLLPQPPLPPMFPLR-PLP----PILP 173
++P P+ + P + P PP QP QPL PQP L P P + P P PIL
Sbjct: 300 KEPLMPRREEKYPLRGTDPLPPGQPQRIPLPGQPLQPQPILTPGQPQKIPTPGQHQPILT 359
Query: 174 DLHLEAWP 181
H + P
Sbjct: 360 PGHSQPIP 367
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 57.0 bits (136), Expect = 1e-08
Identities = 33/97 (34%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 86 IPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQ-----PHQP 140
+P P P + PVP M P P P+P P P P P P
Sbjct: 285 VPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPP 344
Query: 141 MQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLHL 177
M P PP PM PL P PP+ P+ P P+ P+ P H+
Sbjct: 345 MAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPPRSHV 381
Score = 53.9 bits (128), Expect = 8e-08
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 19/77 (24%)
Query: 115 HHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPP---------------- 158
H P LP P P P P +P P PM P+PP+ PM P+ P PP
Sbjct: 236 HLVPQLPRPPVLPVPPMPPRP-PMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPV 294
Query: 159 --LPPMFPLRPLPPILP 173
PPM P+ P PP+ P
Sbjct: 295 PPWPPMAPVPPWPPMAP 311
Score = 52.8 bits (125), Expect = 2e-07
Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Query: 68 PVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQP 127
P ++ P+ PV P PR + PVP M P P P+P P
Sbjct: 265 PPIAPMPPMAPVPPGSRMAPVPPG--PR-----MAPVPPWPPMAPVPPWPPMAPVPTGPP 317
Query: 128 FQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLHLEAWP 181
P P P P + P PP+ + P P PLPP P+ PLPP P L P
Sbjct: 318 MAPVPPGP-PMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGP 370
Score = 51.6 bits (122), Expect = 4e-07
Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 86 IPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQP----QPVQPQPHQPM 141
+ +VP Q PR + P+P + M P P P+P P P PV P P
Sbjct: 235 VHLVP-QLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMA- 292
Query: 142 QPQPPVQPMQPLLPQPPLPPMFPLRPLPPILP 173
PV P P+ P PP PPM P+ PP+ P
Sbjct: 293 ----PVPPWPPMAPVPPWPPMAPVPTGPPMAP 320
Score = 47.8 bits (112), Expect = 6e-06
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 123 PAQQPFQPQPVQPQ-PHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLHLEAWP 181
PA P + PQ P P+ P PP+ P P++P PP PP+ P+ P+ P+ P + P
Sbjct: 227 PALDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVP 286
Score = 47.0 bits (110), Expect = 1e-05
Identities = 28/84 (33%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 86 IPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQP 145
+P P P + PVP M P +P P P P P PM P P
Sbjct: 303 VPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLP----PGPPMAPLP 358
Query: 146 PVQPMQPLLPQPPLPPMFPLRPLP 169
P PM PL P PP+ P+ P +P
Sbjct: 359 PGPPMAPLPPGPPMAPLPPRSHVP 382
Score = 27.7 bits (60), Expect = 6.3
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 114 QHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPP 170
Q +P L P QQ +P ++ + Q PQ V+ PQP P P PP
Sbjct: 85 QQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEG-----PQPAEGPQTAEGPQPP 136
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 52.8 bits (125), Expect = 2e-07
Identities = 42/110 (38%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 82 SHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQP- 140
SH H P +P QP + Q + PVP S TPT HH P + AQQP P P P
Sbjct: 815 SHIHCPQLP--QPALHQNSPSPVP---SRTPTPHHTPP-SIGAQQPPATTIPAPVPTPPA 868
Query: 141 MQPQPPVQPMQPLLPQPPLPPMFPL-RPLPPILPDLHLEAWPATDKTKQE 189
M P P Q + P Q P PP L + + P LP A P+ D+ +Q+
Sbjct: 869 MPPGPQSQALHPPPRQTPTPPTTQLPQQVQPSLP-----AAPSADQPQQQ 913
Score = 46.2 bits (108), Expect = 2e-05
Identities = 34/100 (34%), Positives = 40/100 (40%), Gaps = 12/100 (12%)
Query: 64 HQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPT----QHHQPN 119
H P + Q P T+ + +P PA P + QAL P P Q PT Q QP+
Sbjct: 843 HHTPPSIGAQQPPATTIPAP--VPTPPAMPPGPQSQALHPPPRQTPTPPTTQLPQQVQPS 900
Query: 120 LPL------PAQQPFQPQPVQPQPHQPMQPQPPVQPMQPL 153
LP P QQP Q P P P QP PL
Sbjct: 901 LPAAPSADQPQQQPRSQQSTAASVPTPTAPLLPPQPATPL 940
Score = 40.0 bits (92), Expect = 0.001
Identities = 36/128 (28%), Positives = 47/128 (36%), Gaps = 11/128 (8%)
Query: 72 QQHPLTHTLQSHHHIPVVPAQQPR---VRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPF 128
+Q L H LQ + A R V QQ +P P + T QP P Q
Sbjct: 1814 RQQQLQHRLQQAQMLRRRMASMQRTGVVGQQQGLPSPTPATPTTPTGQQPTTPQTPQPTS 1873
Query: 129 QPQPVQPQPHQPMQPQ-----PPVQPMQPLLPQPPLPPMFPLRPL---PPILPDLHLEAW 180
QPQP P P P+ P Q PP PP PL PP ++ ++
Sbjct: 1874 QPQPTPPNSMPPYLPRTQAAGPVSQGKAAGQVTPPTPPQTAQPPLPGPPPAAVEMAMQIQ 1933
Query: 181 PATDKTKQ 188
A + +Q
Sbjct: 1934 RAAETQRQ 1941
Score = 34.3 bits (77), Expect = 0.067
Identities = 27/90 (30%), Positives = 35/90 (38%), Gaps = 24/90 (26%)
Query: 91 AQQPRVRQQAL------MPVPGQQSMTPTQHHQPNL-----------------PLPAQQP 127
A Q R+ QQ + P+ QQ M P Q P+L P+P+ +P
Sbjct: 2259 AYQQRLLQQQMGSPVQPNPMSPQQHMLPNQAQSPHLQGQQIPNSLSNQVRSPQPVPSPRP 2318
Query: 128 FQPQPVQPQPHQPMQPQPPVQPMQPLLPQP 157
Q QP P MQPQP + P P
Sbjct: 2319 -QSQPPHSSPSPRMQPQPSPHHVSPQTSSP 2347
Score = 33.5 bits (75), Expect = 0.11
Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 37/151 (24%)
Query: 60 GWLHHQIIPVVSQQHPLTHTLQ-SHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQP 118
G + +Q++P ++ Q L Q S P+VP Q P ++ + PG ++ P + P
Sbjct: 696 GSVPNQMMPRITPQSGLNQFGQMSMAQPPIVPRQTPPLQHHGQLAQPG--ALNPPMGYGP 753
Query: 119 NLPLPAQQ-PFQPQPVQPQ--------PHQPMQPQPPVQPMQ------------------ 151
+ P+ Q F PQ P P P Q PV Q
Sbjct: 754 RMQQPSNQGQFLPQTQFPSQGMNVTNIPLAPSSGQAPVSQAQMSSSSCPVNSPIMPPGSQ 813
Query: 152 ------PLLPQPPLPPMFPLRPLPPILPDLH 176
P LPQP L P P+P P H
Sbjct: 814 GSHIHCPQLPQPALHQNSP-SPVPSRTPTPH 843
Score = 30.0 bits (66), Expect = 1.3
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
Query: 103 PVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQP------QPPVQPMQPLLPQ 156
P+PGQ M Q +P QQ P Q PMQ P QP Q L Q
Sbjct: 2099 PIPGQPGMPQGQPGLQPPTMPGQQGVHSNPAM-QNMNPMQAGVQRAGLPQQQPQQQL--Q 2155
Query: 157 PPLPPMFP 164
PP+ M P
Sbjct: 2156 PPMGGMSP 2163
Score = 29.6 bits (65), Expect = 1.6
Identities = 24/76 (31%), Positives = 30/76 (39%), Gaps = 18/76 (23%)
Query: 87 PVVPAQQPRVR------QQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQP 140
P +P QP ++ QQ + P Q+M P Q LP QQP Q
Sbjct: 2104 PGMPQGQPGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLPQQQPQQ----------- 2152
Query: 141 MQPQPPVQPMQPLLPQ 156
Q QPP+ M P Q
Sbjct: 2153 -QLQPPMGGMSPQAQQ 2167
Score = 28.5 bits (62), Expect = 3.7
Identities = 25/88 (28%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 90 PAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQP------HQPMQP 143
P Q + Q P P Q + P P A Q + Q Q +P+Q
Sbjct: 1895 PVSQGKAAGQVTPPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQH 1954
Query: 144 Q-PPVQPMQPLLPQPPLPPMFPLRPLPP 170
Q PP+ PM P+ PP P L P
Sbjct: 1955 QMPPMTPMAPMGMNPPPMTRGPSGHLEP 1982
Score = 27.7 bits (60), Expect = 6.3
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 63 HHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVP-GQQSMTPTQHHQPNLP 121
H+Q +P + HH+ + QQ + Q +P G ++ Q +Q L
Sbjct: 2208 HNQFQQPQGVGYPPQQQQRMQHHMQQM--QQGNMGQIGQLPQALGAEAGASLQAYQQRL- 2264
Query: 122 LPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLP 160
Q PVQP P P Q P Q P L +P
Sbjct: 2265 ---LQQQMGSPVQPNPMSPQQHMLPNQAQSPHLQGQQIP 2300
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 51.6 bits (122), Expect = 4e-07
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 90 PAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQP 149
P Q P + + + +P + S P++ P Q P+ QP P+ + P QP
Sbjct: 1050 PCQSPTISEGPVPSLPIRPSRAPSR-------TPGPPSAQSSPIDAQPATPLPQKDPAQP 1102
Query: 150 MQPLLPQPPLPPMFPLRPLPPILP 173
++P P PP P P RP PP P
Sbjct: 1103 LEPKRPPPPRPVAPPTRPAPPQRP 1126
Score = 33.9 bits (76), Expect = 0.087
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 88 VVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNL---PLPAQQPFQPQPVQPQPHQPMQPQ 144
V+ A Q R A P QS T PL Q F PQ P P Q +Q
Sbjct: 1188 VISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQE- 1246
Query: 145 PPVQPMQPLLPQPPLPPMFPLRPLPP 170
P+ P+ +PQ P P PP
Sbjct: 1247 -PLVPVAAPMPQSGPQPNLETPPQPP 1271
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 51.6 bits (122), Expect = 4e-07
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 90 PAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQP 149
P Q P + + + +P + S P++ P Q P+ QP P+ + P QP
Sbjct: 1089 PCQSPTISEGPVPSLPIRPSRAPSR-------TPGPPSAQSSPIDAQPATPLPQKDPAQP 1141
Query: 150 MQPLLPQPPLPPMFPLRPLPPILP 173
++P P PP P P RP PP P
Sbjct: 1142 LEPKRPPPPRPVAPPTRPAPPQRP 1165
Score = 33.9 bits (76), Expect = 0.087
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 88 VVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNL---PLPAQQPFQPQPVQPQPHQPMQPQ 144
V+ A Q R A P QS T PL Q F PQ P P Q +Q
Sbjct: 1243 VISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQE- 1301
Query: 145 PPVQPMQPLLPQPPLPPMFPLRPLPP 170
P+ P+ +PQ P P PP
Sbjct: 1302 -PLVPVAAPMPQSGPQPNLETPPQPP 1326
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 51.6 bits (122), Expect = 4e-07
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 90 PAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQP 149
P Q P + + + +P + S P++ P Q P+ QP P+ + P QP
Sbjct: 1089 PCQSPTISEGPVPSLPIRPSRAPSR-------TPGPPSAQSSPIDAQPATPLPQKDPAQP 1141
Query: 150 MQPLLPQPPLPPMFPLRPLPPILP 173
++P P PP P P RP PP P
Sbjct: 1142 LEPKRPPPPRPVAPPTRPAPPQRP 1165
Score = 33.9 bits (76), Expect = 0.087
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 88 VVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNL---PLPAQQPFQPQPVQPQPHQPMQPQ 144
V+ A Q R A P QS T PL Q F PQ P P Q +Q
Sbjct: 1243 VISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQE- 1301
Query: 145 PPVQPMQPLLPQPPLPPMFPLRPLPP 170
P+ P+ +PQ P P PP
Sbjct: 1302 -PLVPVAAPMPQSGPQPNLETPPQPP 1326
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 51.6 bits (122), Expect = 4e-07
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 90 PAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQP 149
P Q P + + + +P + S P++ P Q P+ QP P+ + P QP
Sbjct: 1045 PCQSPTISEGPVPSLPIRPSRAPSR-------TPGPPSAQSSPIDAQPATPLPQKDPAQP 1097
Query: 150 MQPLLPQPPLPPMFPLRPLPPILP 173
++P P PP P P RP PP P
Sbjct: 1098 LEPKRPPPPRPVAPPTRPAPPQRP 1121
Score = 33.9 bits (76), Expect = 0.087
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 5/86 (5%)
Query: 88 VVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNL---PLPAQQPFQPQPVQPQPHQPMQPQ 144
V+ A Q R A P QS T PL Q F PQ P P Q +Q
Sbjct: 1157 VISAPQSHARASAGRLTPESQSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQE- 1215
Query: 145 PPVQPMQPLLPQPPLPPMFPLRPLPP 170
P+ P+ +PQ P P PP
Sbjct: 1216 -PLVPVAAPMPQSGPQPNLETPPQPP 1240
Score = 32.7 bits (73), Expect = 0.19
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 7/78 (8%)
Query: 91 AQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQ--PQPHQPMQPQPPV- 147
AQ + Q P+P + P + +P P P P +P P Q P P QP P
Sbjct: 1076 AQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGRSQPSPQAG 1135
Query: 148 ----QPMQPLLPQPPLPP 161
P +P +PP
Sbjct: 1136 LAGPGPAGYSTARPTIPP 1153
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 51.2 bits (121), Expect = 5e-07
Identities = 50/145 (34%), Positives = 60/145 (41%), Gaps = 21/145 (14%)
Query: 18 PLPPHPGHPGYINFSYEVLTPLKWYQSMIRPPYSSYGYEPMGGWLHHQIIPVVSQQHPLT 77
P P GH GY Y TP ++ +M S+ MGG + Q IP QQ P
Sbjct: 408 PSGPQQGH-GYPGQPYGSQTPQRYPMTMQGRAQSA-----MGGLSYTQQIPPYGQQGPSG 461
Query: 78 HTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQP 137
+ Q P Q P +QQ P QQ + T H QP+ +Q QP Q QP
Sbjct: 462 YGQQGQ--TPYYNQQSPHPQQQ--QPPYSQQPPSQTPHAQPS--------YQQQP-QSQP 508
Query: 138 HQPMQPQPPV--QPMQPLLPQPPLP 160
Q QPP QP QP Q P P
Sbjct: 509 PQLQSSQPPYSQQPSQPPHQQSPAP 533
Score = 40.4 bits (93), Expect = 0.001
Identities = 49/169 (28%), Positives = 61/169 (36%), Gaps = 36/169 (21%)
Query: 12 GAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQS----MIRPPYSSYGYEPMGGWLHHQII 67
G ++ +PP+ G G + + TP QS +PPYS +P H Q
Sbjct: 444 GLSYTQQIPPY-GQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQ---QPPSQTPHAQ-- 497
Query: 68 PVVSQQHPLTHTLQSHHHIPVV---PAQQPRVRQQALMPVPGQQSMT------------- 111
QQ P + Q P P+Q P QQ+ P P QQS T
Sbjct: 498 -PSYQQQPQSQPPQLQSSQPPYSQQPSQPPH--QQSPAPYPSQQSTTQQHPQSQPPYSQP 554
Query: 112 ----PTQHHQPNLPLP---AQQPFQPQPVQPQPHQPMQPQPPVQPMQPL 153
P Q QP P P +QQ PQP Q Q Q P Q L
Sbjct: 555 QAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQEL 603
Score = 29.3 bits (64), Expect = 2.2
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Query: 87 PVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQ-- 144
PV P +P P P Q+ P LP P + P P H M+ Q
Sbjct: 1560 PVPPMTRPPPSNY--QPPPSMQNHIPQVSSPAPLPRPMENRTSPSK-SPFLHSGMKMQKA 1616
Query: 145 -PPVQPMQPLLPQPPLPPM 162
PPV P + P P PPM
Sbjct: 1617 GPPV-PASHIAPAPVQPPM 1634
Score = 27.7 bits (60), Expect = 6.3
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 103 PVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQ------PHQPMQPQPPVQPMQPLLPQ 156
P P QQ+ T Q Q N P + P + + P+ Q QP Q + P PQ
Sbjct: 1353 PFPSQQT-TMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQ 1411
Query: 157 P 157
P
Sbjct: 1412 P 1412
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 51.2 bits (121), Expect = 5e-07
Identities = 50/145 (34%), Positives = 60/145 (41%), Gaps = 21/145 (14%)
Query: 18 PLPPHPGHPGYINFSYEVLTPLKWYQSMIRPPYSSYGYEPMGGWLHHQIIPVVSQQHPLT 77
P P GH GY Y TP ++ +M S+ MGG + Q IP QQ P
Sbjct: 408 PSGPQQGH-GYPGQPYGSQTPQRYPMTMQGRAQSA-----MGGLSYTQQIPPYGQQGPSG 461
Query: 78 HTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQP 137
+ Q P Q P +QQ P QQ + T H QP+ +Q QP Q QP
Sbjct: 462 YGQQGQ--TPYYNQQSPHPQQQ--QPPYSQQPPSQTPHAQPS--------YQQQP-QSQP 508
Query: 138 HQPMQPQPPV--QPMQPLLPQPPLP 160
Q QPP QP QP Q P P
Sbjct: 509 PQLQSSQPPYSQQPSQPPHQQSPAP 533
Score = 40.4 bits (93), Expect = 0.001
Identities = 46/166 (27%), Positives = 63/166 (37%), Gaps = 30/166 (18%)
Query: 12 GAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQS----MIRPPYS------------SYGY 55
G ++ +PP+ G G + + TP QS +PPYS SY
Sbjct: 444 GLSYTQQIPPY-GQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQ 502
Query: 56 EPMGGWLHHQIIPVVSQQHPLTH--TLQSHHHIPV-VPAQQPRVRQ--QALMPVPGQQSM 110
+P Q + S Q P + + H P P+QQ +Q Q+ P Q+
Sbjct: 503 QPQS-----QPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQ 557
Query: 111 TPTQHHQPNLPLP---AQQPFQPQPVQPQPHQPMQPQPPVQPMQPL 153
+P Q QP P P +QQ PQP Q Q Q P Q L
Sbjct: 558 SPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQEL 603
Score = 31.2 bits (69), Expect = 0.57
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 103 PVPGQQSMTPTQHHQPNLPLPAQQPFQPQ---PVQPQPHQPMQPQ---PPVQPMQPLLPQ 156
P P QQ+ Q Q + P P +P + + P H M+ Q PPV P + P
Sbjct: 1353 PFPSQQTTMYQQQQQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPV-PASHIAPA 1411
Query: 157 PPLPPM 162
P PPM
Sbjct: 1412 PVQPPM 1417
>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
Length = 521
Score = 50.8 bits (120), Expect = 7e-07
Identities = 35/75 (46%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 105 PGQQSM-TPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQP--PVQPMQPLLPQPPLPP 161
PG S+ T QP P QQP QPQP Q QP QP QPQP P QP QP Q L P
Sbjct: 353 PGGLSLGNVTAWQQPQQP---QQPQQPQPPQQQPPQPQQPQPQQPQQPQQPPQQQSHLVP 409
Query: 162 -----MFPLRPLPPI 171
+ P PLP +
Sbjct: 410 VSLSNLIPGSPLPHV 424
Score = 42.4 bits (98), Expect = 2e-04
Identities = 34/102 (33%), Positives = 37/102 (36%), Gaps = 24/102 (23%)
Query: 92 QQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQ------------PVQPQPHQ 139
QQP+ QQ P P QQ Q QP P QQP Q Q P P PH
Sbjct: 365 QQPQQPQQPQQPQPPQQQPPQPQQPQPQQPQQPQQPPQQQSHLVPVSLSNLIPGSPLPHV 424
Query: 140 PMQ-----------PQPPVQPMQPLLPQPPLPPMFP-LRPLP 169
PV P + P PP P +FP RP P
Sbjct: 425 GAALTVTTHPHISIKSEPVSPSRERSPAPPPPAVFPAARPEP 466
Score = 37.4 bits (85), Expect = 0.008
Identities = 36/107 (33%), Positives = 40/107 (37%), Gaps = 11/107 (10%)
Query: 81 QSHHHI--PVVPAQQPRVRQQAL----MPVPGQQSMTPTQHHQPNLPL---PAQQPFQPQ 131
QS H + PVV P + Q L MP T +LP P
Sbjct: 302 QSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNV 361
Query: 132 PVQPQPHQPMQPQPPVQPMQPLLPQPPLP-PMFPLRPLPPILPDLHL 177
QP QP QPQ P QP Q PQP P P P +P P HL
Sbjct: 362 TAWQQPQQPQQPQQP-QPPQQQPPQPQQPQPQQPQQPQQPPQQQSHL 407
>gi|90903231 huntingtin [Homo sapiens]
Length = 3144
Score = 49.7 bits (117), Expect = 2e-06
Identities = 30/64 (46%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 107 QQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLR 166
QQ Q Q QQ QP P P P P PQPP Q QPLLPQP PP P
Sbjct: 18 QQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQA-QPLLPQPQPPP--PPP 74
Query: 167 PLPP 170
P PP
Sbjct: 75 PPPP 78
Score = 40.8 bits (94), Expect = 7e-04
Identities = 25/68 (36%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 92 QQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQ 151
QQ + +QQ QQ P P P Q P Q QP+ PQP P P PP P
Sbjct: 22 QQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQPLLPQPQPP--PPPPPPPPG 79
Query: 152 PLLPQPPL 159
P + + PL
Sbjct: 80 PAVAEEPL 87
Score = 39.3 bits (90), Expect = 0.002
Identities = 26/66 (39%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
Query: 97 RQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPH-QPMQPQPPVQPMQPLLP 155
+QQ QQ Q Q P P P PQ QP P QP+ PQP QP P
Sbjct: 18 QQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQPLLPQP-----QPPPP 72
Query: 156 QPPLPP 161
PP PP
Sbjct: 73 PPPPPP 78
Score = 35.0 bits (79), Expect = 0.039
Identities = 20/43 (46%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 128 FQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPP 170
FQ Q Q Q Q Q Q Q QP P PP PP P P PP
Sbjct: 17 FQQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPP--PQLPQPP 57
Score = 35.0 bits (79), Expect = 0.039
Identities = 29/77 (37%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 92 QQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQ 151
QQ + +QQ QQ Q P P P Q QP P Q QP P PQPP P
Sbjct: 18 QQQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPP-QAQPLLPQ-PQPPPPP-- 73
Query: 152 PLLPQPPLPPMFPLRPL 168
P PP P PL
Sbjct: 74 ---PPPPPGPAVAEEPL 87
Score = 29.3 bits (64), Expect = 2.2
Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 122 LPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRP--LPPILP 173
L + Q Q Q Q Q Q Q Q QP P PP PP P P P+LP
Sbjct: 14 LKSFQQQQQQQQQQQQQQQQQQQQQQQPPPPP--PPPPPPQLPQPPPQAQPLLP 65
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 49.7 bits (117), Expect = 2e-06
Identities = 49/138 (35%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 69 VVSQQHPL-THTLQSHHHIPVVPAQQPRVRQQALMPVP-----GQQSMTPTQHH-----Q 117
V S Q P+ +HT + P P V +P P G + P QHH
Sbjct: 884 VDSIQAPIPSHTAPRPNPTPAPPPPCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIP 943
Query: 118 PNLPLPAQQPFQPQP-VQPQPHQPMQPQPPVQPM---QPLL--PQPP--LPPM--FPLRP 167
P P P QPQP QP P Q PQPP QP+ P L PQ P LPP +P P
Sbjct: 944 AGFPAPRIGP-QPQPHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQAPGLLPPQSPYPYAP 1002
Query: 168 LPPIL----PDLHLEAWP 181
P +L P LH + +P
Sbjct: 1003 QPGVLGQPPPPLHTQLYP 1020
Score = 42.4 bits (98), Expect = 2e-04
Identities = 40/134 (29%), Positives = 48/134 (35%), Gaps = 25/134 (18%)
Query: 48 PPYSSYGYEPMGGWLHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQ 107
PP S Y Y P G L P+ +Q +P PAQ P +P P
Sbjct: 993 PPQSPYPYAPQPGVLGQPPPPLHTQLYP-------------GPAQDPLPAHSGALPFP-- 1037
Query: 108 QSMTPTQHHQPNL---PLPAQQPFQPQPVQ-----PQPHQPMQPQPPVQPMQPLLPQP-P 158
S P Q P L P P+ +P PQ P P P + P P P P
Sbjct: 1038 -SPGPPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSPGPGP 1096
Query: 159 LPPMFPLRPLPPIL 172
+PP P PP L
Sbjct: 1097 VPPRPPAAEPPPCL 1110
Score = 38.5 bits (88), Expect = 0.004
Identities = 41/147 (27%), Positives = 47/147 (31%), Gaps = 48/147 (32%)
Query: 72 QQHPLTHTLQS-------------HHHI--PVVPAQQPRVRQQALMPVPGQQSMTPTQHH 116
Q HP H Q+ H H+ P P P P PG P H
Sbjct: 956 QPHPQPHPSQAFGPQPPQQPLPLQHPHLFPPQAPGLLPPQSPYPYAPQPGVLGQPPPPLH 1015
Query: 117 QPNLPLPAQQPFQ--------PQPVQPQ-PHQPMQ--PQPPVQPMQP------------- 152
P PAQ P P P PQ PH P+ P P +PM P
Sbjct: 1016 TQLYPGPAQDPLPAHSGALPFPSPGPPQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSA 1075
Query: 153 --------LLPQP-PLPPMFPLRPLPP 170
L+P P P P P+ P PP
Sbjct: 1076 GQSTPSPHLVPSPAPSPGPGPVPPRPP 1102
Score = 30.8 bits (68), Expect = 0.74
Identities = 28/99 (28%), Positives = 35/99 (35%), Gaps = 25/99 (25%)
Query: 103 PVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQP----- 157
P+P PTQ QP P P P P P + P P P L+P+
Sbjct: 790 PLPPGTYSGPTQLIQPRAPGPHAMPVAPGPA-------LYPAPAYTPELGLVPRSSPQHG 842
Query: 158 ----------PLPPMFPLRPLPPIL---PDLHLEAWPAT 183
P PP+ L PP P+L + PAT
Sbjct: 843 VVSSPYVGVGPAPPVAGLPSAPPPQFSGPELAMAVRPAT 881
Score = 28.1 bits (61), Expect = 4.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 119 NLPLPAQQPFQPQPVQPQPHQ-PMQPQPPVQPMQPLLPQPPLPPMFPLRP 167
+LP PA+ P P P+ P PP+ P PQP P P P
Sbjct: 1519 SLPGPAEPPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPEAP 1568
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 49.3 bits (116), Expect = 2e-06
Identities = 53/162 (32%), Positives = 63/162 (38%), Gaps = 19/162 (11%)
Query: 16 AMPLPPHPGHPGYINFSYEVLTPLKWYQSMIRPPYSSYGYEP--------MGGWLHHQII 67
A LPP P P ++ + TPL M +PP E M L+ Q +
Sbjct: 877 AAALPPKPARPPAVSPAL-TQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQL 935
Query: 68 PVVSQQHPLTHTL--QSHHHIPVVPAQQPRVRQQALM----PVPGQQSMTPTQHHQPNLP 121
V PL ++ QS P+ P P V+QQ P P Q P Q HQP P
Sbjct: 936 QKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPP-P 994
Query: 122 LPAQ-QP--FQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLP 160
P QP F QP P Q QP P QP PQP P
Sbjct: 995 RPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPPQPAKP 1036
Score = 47.0 bits (110), Expect = 1e-05
Identities = 40/111 (36%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 74 HPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPV 133
HP + HHH + QQA PVP QQ P Q QP P P QQ QP P
Sbjct: 730 HPGREQKKHHHH-------HHQQMQQAPAPVP-QQPPPPPQ--QPPPPPPPQQQQQPPPP 779
Query: 134 QPQPHQPMQPQPPVQPMQP---LLPQPPLPPMFPLRPLPPI----LPDLHL 177
P P P Q P ++ P P L P P PI P LHL
Sbjct: 780 PPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPGSVFDPIGHFTQPILHL 830
Score = 47.0 bits (110), Expect = 1e-05
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 27/184 (14%)
Query: 18 PLPPHPGHPGYINFSYEVLTP--LKWYQSMIRPPYSSYGYEPMGGWLHHQIIPVVSQQHP 75
P PP P P + + P + ++ P ++P+G H P++ P
Sbjct: 778 PPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPGSVFDPIG----HFTQPILHLPQP 833
Query: 76 LTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPA--QQPFQPQPV 133
L H P + P + Q A++ P + P Q +P+ A +P +P V
Sbjct: 834 ---ELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAV 890
Query: 134 QPQPHQ-PMQPQPPV-QPMQPLLP--QPPLPPMFPLR------------PLPPILPDLHL 177
P Q P+ PQPP+ QP Q LL +PP PP+ ++ P P+LP + +
Sbjct: 891 SPALTQTPLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKV 950
Query: 178 EAWP 181
++ P
Sbjct: 951 QSQP 954
Score = 40.4 bits (93), Expect = 0.001
Identities = 23/62 (37%), Positives = 27/62 (43%)
Query: 108 QSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRP 167
Q + Q P LP Q P P+ P PH +Q Q QP P PQP PP +P
Sbjct: 933 QQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQP 992
Query: 168 LP 169
P
Sbjct: 993 PP 994
Score = 38.1 bits (87), Expect = 0.005
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 94 PRVRQQALMPVPGQQSMTPTQHHQPNLPL--PAQQPFQPQPVQPQPHQPMQPQPPVQPM- 150
P+ + P P Q + P P+L + P PQP+Q P P QPQPP P
Sbjct: 206 PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAP 265
Query: 151 QPLLPQPPL 159
QP+ PP+
Sbjct: 266 QPVQSHPPI 274
Score = 37.7 bits (86), Expect = 0.006
Identities = 37/96 (38%), Positives = 43/96 (44%), Gaps = 25/96 (26%)
Query: 108 QSMTP--TQHHQPNLPLPAQQPFQPQP-VQPQ-----------PHQPMQPQPPVQPMQPL 153
Q+ TP TQ QPN P P Q P P V P P QP+Q PPV P
Sbjct: 201 QASTPPQTQTPQPNPP-PVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQ--- 256
Query: 154 LPQPP-LPPMFPLRPLPPILPDLHLEAWPATDKTKQ 188
PQPP P P++ PPI + A P KTK+
Sbjct: 257 -PQPPPAPAPQPVQSHPPI-----IAATPQPVKTKK 286
Score = 33.9 bits (76), Expect = 0.087
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 19/127 (14%)
Query: 68 PVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQP 127
P +SQ LTH ++ QP+ ++ V Q + + + + P+ +P
Sbjct: 1071 PQMSQFQSLTHQSPPQQNV------QPKKQELRAASVVQPQPLVVVKEEKIHSPIIRSEP 1124
Query: 128 FQPQPVQPQPHQPMQPQPPVQPMQPLLP--QPPLPPMFPLRPLPPIL--PDLHLEAWPAT 183
F P ++P+PP P P P P M P+ P++ P+ + A
Sbjct: 1125 FSPS---------LRPEPPKHPESIKAPVHLPQRPEMKPVDVGRPVIRPPEQNAPPPGAP 1175
Query: 184 DKTKQEE 190
DK KQ++
Sbjct: 1176 DKDKQKQ 1182
>gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo
sapiens]
Length = 218
Score = 48.5 bits (114), Expect = 3e-06
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 118 PNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPI 171
P PLP ++P +P P P+P P P+PP+ P +P P+PPLPP P +P P+
Sbjct: 24 PPPPLPPRKPPRP-PKPPRPLPPNPPRPPLPPPRP--PKPPLPPPRPPKPPSPL 74
Score = 42.4 bits (98), Expect = 2e-04
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 135 PQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILP 173
P P P +P P +P +PL P PP PP+ P RP P LP
Sbjct: 25 PPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLP 63
Score = 36.2 bits (82), Expect = 0.018
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 140 PMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILP 173
P P PP +P +P P PLPP P PLPP P
Sbjct: 24 PPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRP 57
Score = 36.2 bits (82), Expect = 0.018
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 112 PTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLP 160
P +P P +P P P +P P P+PP+ P +P P+PP P
Sbjct: 27 PLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRP--PKPPSP 73
Score = 35.8 bits (81), Expect = 0.023
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 137 PHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDL 175
P P+ P+ P +P +P P PP PP PL P P P L
Sbjct: 24 PPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPL 62
Score = 28.1 bits (61), Expect = 4.8
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 12/59 (20%)
Query: 87 PVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQP 145
P+ P + PR P P + P + P PLP +P P+P P P P P P
Sbjct: 27 PLPPRKPPRP------PKPPR----PLPPNPPRPPLPPPRP--PKPPLPPPRPPKPPSP 73
Score = 27.3 bits (59), Expect = 8.2
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 103 PVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPM 150
P+P ++ P + +P P P + P P P P +P P P+
Sbjct: 27 PLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPPKPPSPL 74
>gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo
sapiens]
Length = 218
Score = 48.5 bits (114), Expect = 3e-06
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 118 PNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPI 171
P PLP ++P +P P P+P P P+PP+ P +P P+PPLPP P +P P+
Sbjct: 24 PPPPLPPRKPPRP-PKPPRPLPPNPPRPPLPPPRP--PKPPLPPPRPPKPPSPL 74
Score = 42.4 bits (98), Expect = 2e-04
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 135 PQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILP 173
P P P +P P +P +PL P PP PP+ P RP P LP
Sbjct: 25 PPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLP 63
Score = 36.2 bits (82), Expect = 0.018
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 140 PMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILP 173
P P PP +P +P P PLPP P PLPP P
Sbjct: 24 PPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRP 57
Score = 36.2 bits (82), Expect = 0.018
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 112 PTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLP 160
P +P P +P P P +P P P+PP+ P +P P+PP P
Sbjct: 27 PLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRP--PKPPSP 73
Score = 35.8 bits (81), Expect = 0.023
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 137 PHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDL 175
P P+ P+ P +P +P P PP PP PL P P P L
Sbjct: 24 PPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPL 62
Score = 28.1 bits (61), Expect = 4.8
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 12/59 (20%)
Query: 87 PVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQP 145
P+ P + PR P P + P + P PLP +P P+P P P P P P
Sbjct: 27 PLPPRKPPRP------PKPPR----PLPPNPPRPPLPPPRP--PKPPLPPPRPPKPPSP 73
Score = 27.3 bits (59), Expect = 8.2
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 103 PVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPM 150
P+P ++ P + +P P P + P P P P +P P P+
Sbjct: 27 PLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPPKPPSPL 74
>gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo
sapiens]
Length = 218
Score = 48.5 bits (114), Expect = 3e-06
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 118 PNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPI 171
P PLP ++P +P P P+P P P+PP+ P +P P+PPLPP P +P P+
Sbjct: 24 PPPPLPPRKPPRP-PKPPRPLPPNPPRPPLPPPRP--PKPPLPPPRPPKPPSPL 74
Score = 42.4 bits (98), Expect = 2e-04
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 135 PQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILP 173
P P P +P P +P +PL P PP PP+ P RP P LP
Sbjct: 25 PPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLP 63
Score = 36.2 bits (82), Expect = 0.018
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 140 PMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILP 173
P P PP +P +P P PLPP P PLPP P
Sbjct: 24 PPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRP 57
Score = 36.2 bits (82), Expect = 0.018
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 112 PTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLP 160
P +P P +P P P +P P P+PP+ P +P P+PP P
Sbjct: 27 PLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRP--PKPPSP 73
Score = 35.8 bits (81), Expect = 0.023
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 137 PHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDL 175
P P+ P+ P +P +P P PP PP PL P P P L
Sbjct: 24 PPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPL 62
Score = 28.1 bits (61), Expect = 4.8
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 12/59 (20%)
Query: 87 PVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQP 145
P+ P + PR P P + P + P PLP +P P+P P P P P P
Sbjct: 27 PLPPRKPPRP------PKPPR----PLPPNPPRPPLPPPRP--PKPPLPPPRPPKPPSP 73
Score = 27.3 bits (59), Expect = 8.2
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 103 PVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQPPVQPM 150
P+P ++ P + +P P P + P P P P +P P P+
Sbjct: 27 PLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPPKPPSPL 74
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 48.1 bits (113), Expect = 4e-06
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 18/115 (15%)
Query: 72 QQHPLTHTLQSHH-HIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQP 130
QQ H ++ HH + + QQ ++++ A + + QQ Q Q L AQ P Q
Sbjct: 213 QQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQ 272
Query: 131 QPVQ-PQP-------------HQPMQPQPPVQPMQPLLPQ---PPLPPMFPLRPL 168
P+Q PQP H QPP QP QP + Q LPP +PL
Sbjct: 273 PPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPL 327
Score = 43.5 bits (101), Expect = 1e-04
Identities = 36/100 (36%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 72 QQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQ 131
QQ LQ+ I P QQP+ +P QQ M TQHHQP P QPQ
Sbjct: 256 QQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQ-MHHTQHHQP--------PPQPQ 306
Query: 132 PVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPI 171
+QP Q PP QPL+ Q P L PP+
Sbjct: 307 QPPVAQNQPSQL-PPQSQTQPLVSQAQALPGQMLYTQPPL 345
Score = 40.4 bits (93), Expect = 0.001
Identities = 36/116 (31%), Positives = 47/116 (40%), Gaps = 18/116 (15%)
Query: 62 LHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQ-QPRVRQQALMPVPGQQSMTPTQHHQPNL 120
+ Q VV QQ L Q H+ + Q Q +++QQ QQ + Q
Sbjct: 196 MQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQ-------QQQLQRIAQLQLQ- 247
Query: 121 PLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLH 176
QQ Q Q Q Q Q +Q QPP+Q PQPP P + LP L +H
Sbjct: 248 ----QQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPP-----PSQALPQQLQQMH 294
Score = 33.1 bits (74), Expect = 0.15
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 86 IPVVPAQQPRVRQQAL----MPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQP--QPHQ 139
IP+ +V Q +L P PGQQ TP ++P P Q PQP QP QP+
Sbjct: 415 IPLGRQPMAQVSQSSLPMLSSPSPGQQVQTPQ-----SMPPPPQP--SPQPGQPSSQPNS 467
Query: 140 PMQPQPPVQPMQPLLPQPPLPPMFPLRPLPP 170
+ P P L P P P+ P
Sbjct: 468 NVSSGPAPSPSSFLPSPSPQPSQSPVTARTP 498
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 48.1 bits (113), Expect = 4e-06
Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 18/115 (15%)
Query: 72 QQHPLTHTLQSHH-HIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQP 130
QQ H ++ HH + + QQ ++++ A + + QQ Q Q L AQ P Q
Sbjct: 213 QQQQQQHLIKLHHQNQQQIQQQQQQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQ 272
Query: 131 QPVQ-PQP-------------HQPMQPQPPVQPMQPLLPQ---PPLPPMFPLRPL 168
P+Q PQP H QPP QP QP + Q LPP +PL
Sbjct: 273 PPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQPPVAQNQPSQLPPQSQTQPL 327
Score = 43.5 bits (101), Expect = 1e-04
Identities = 36/100 (36%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 72 QQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQ 131
QQ LQ+ I P QQP+ +P QQ M TQHHQP P QPQ
Sbjct: 256 QQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQ-MHHTQHHQP--------PPQPQ 306
Query: 132 PVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPI 171
+QP Q PP QPL+ Q P L PP+
Sbjct: 307 QPPVAQNQPSQL-PPQSQTQPLVSQAQALPGQMLYTQPPL 345
Score = 40.4 bits (93), Expect = 0.001
Identities = 36/116 (31%), Positives = 47/116 (40%), Gaps = 18/116 (15%)
Query: 62 LHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQ-QPRVRQQALMPVPGQQSMTPTQHHQPNL 120
+ Q VV QQ L Q H+ + Q Q +++QQ QQ + Q
Sbjct: 196 MQQQFQAVVQQQQQLQQQQQQQQHLIKLHHQNQQQIQQQ-------QQQLQRIAQLQLQ- 247
Query: 121 PLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLH 176
QQ Q Q Q Q Q +Q QPP+Q PQPP P + LP L +H
Sbjct: 248 ----QQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPP-----PSQALPQQLQQMH 294
Score = 37.7 bits (86), Expect = 0.006
Identities = 50/161 (31%), Positives = 58/161 (36%), Gaps = 27/161 (16%)
Query: 20 PPHPGHPGYINFSYEVLTPLKWYQSMIR-----PPYSSYGYEPMGGWLHHQIIPVVSQQH 74
PP P P L P Q ++ P Y P L P+V QQ
Sbjct: 302 PPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPP----LKFVRAPMVVQQP 357
Query: 75 PLTHTLQSHHHIPVVPAQQPRVR--QQALMPVPGQQSMTPTQHHQPNL--PLPAQQPFQP 130
P+ P V QQ V+ Q A M PG Q +Q P L P P QQ P
Sbjct: 358 PVQ---------PQVQQQQTAVQTAQAAQMVAPGVQV---SQSSLPMLSSPSPGQQVQTP 405
Query: 131 QPVQPQPHQPMQP-QPPVQPMQPLLPQP-PLPPMFPLRPLP 169
Q + P P QP QP QP + P P P F P P
Sbjct: 406 QSMPPPPQPSPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSP 446
Score = 35.8 bits (81), Expect = 0.023
Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 11/106 (10%)
Query: 68 PVVSQQHPLTHTLQSHHHI-PVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQ 126
P V QQ T Q+ + P V Q + + P PGQQ TP ++P P Q
Sbjct: 361 PQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPMLS-SPSPGQQVQTPQ-----SMPPPPQP 414
Query: 127 PFQPQPVQP--QPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPP 170
PQP QP QP+ + P P L P P P+ P
Sbjct: 415 --SPQPGQPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTP 458
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 47.8 bits (112), Expect = 6e-06
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 86 IPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQP 145
+P + V + P+P S+ P P +P+P P P PV P P P P
Sbjct: 175 VPSTASPMNTVPPPPIPPIPAMPSLPPMPSIPP-IPVPPPVPTLP-PVPPVP-----PIP 227
Query: 146 PVQPMQPLLPQPPLPPMFPLRPLPPILP 173
PV + P+ P PP+ M PL P PP+ P
Sbjct: 228 PVPSVPPMTPLPPMSGMPPLNP-PPVAP 254
Score = 35.0 bits (79), Expect = 0.039
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 130 PQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDL 175
P P P P PP+ M L P P +PP+ P+PP +P L
Sbjct: 176 PSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPI----PVPPPVPTL 217
Score = 33.1 bits (74), Expect = 0.15
Identities = 34/116 (29%), Positives = 43/116 (37%), Gaps = 16/116 (13%)
Query: 75 PLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQ---PFQPQ 131
P +L IP +P P L PVP + P P PLP P P
Sbjct: 194 PAMPSLPPMPSIPPIPVPPP---VPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
Query: 132 PVQPQP------HQPMQPQPPVQPM--QPLLPQPPLP--PMFPLRPLPPILPDLHL 177
PV P P PM + PM PL P P+ ++PLP DL++
Sbjct: 251 PVAPLPAGMNGSGAPMNLNNNLNPMFLGPLNPVNPIQMNSQSSVKPLPINPDDLYV 306
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 47.8 bits (112), Expect = 6e-06
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 86 IPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPMQPQP 145
+P + V + P+P S+ P P +P+P P P PV P P P P
Sbjct: 175 VPSTASPMNTVPPPPIPPIPAMPSLPPMPSIPP-IPVPPPVPTLP-PVPPVP-----PIP 227
Query: 146 PVQPMQPLLPQPPLPPMFPLRPLPPILP 173
PV + P+ P PP+ M PL P PP+ P
Sbjct: 228 PVPSVPPMTPLPPMSGMPPLNP-PPVAP 254
Score = 35.0 bits (79), Expect = 0.039
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 130 PQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDL 175
P P P P PP+ M L P P +PP+ P+PP +P L
Sbjct: 176 PSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPI----PVPPPVPTL 217
Score = 33.1 bits (74), Expect = 0.15
Identities = 34/116 (29%), Positives = 43/116 (37%), Gaps = 16/116 (13%)
Query: 75 PLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNLPLPAQQ---PFQPQ 131
P +L IP +P P L PVP + P P PLP P P
Sbjct: 194 PAMPSLPPMPSIPPIPVPPP---VPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
Query: 132 PVQPQP------HQPMQPQPPVQPM--QPLLPQPPLP--PMFPLRPLPPILPDLHL 177
PV P P PM + PM PL P P+ ++PLP DL++
Sbjct: 251 PVAPLPAGMNGSGAPMNLNNNLNPMFLGPLNPVNPIQMNSQSSVKPLPINPDDLYV 306
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.471
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,552,121
Number of Sequences: 37866
Number of extensions: 808185
Number of successful extensions: 18972
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 783
Number of HSP's that attempted gapping in prelim test: 6218
Number of HSP's gapped (non-prelim): 6618
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.