Guide to the Human Genome
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Name: AKR1B1 Sequence: fasta or formatted (316aa) NCBI GI: 4502049
Description:

aldo-keto reductase family 1, member B1

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Hexokinases and Initial Sugar Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         19           2
 C cysteine            2.2          7           1
 D aspartate           4.7         15           1
 E glutamate           7.3         23           2
 F phenylalanine       3.5         11           2
 G glycine             5.1         16           1
 H histidine           2.8          9           1
 I isoleucine          5.7         18           1
 K lysine              7.9         25           1
 L leucine            10.8         34           3
 M methionine          1.9          6           1
 N asparagine          4.7         15           2
 P proline             6.3         20           2
 Q glutamine           4.1         13           1
 R arginine            3.5         11           1
 S serine              5.4         17           2
 T threonine           4.7         15           2
 V valine              7.9         25           2
 W tryptophan          1.9          6           1
 Y tyrosine            3.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldo-keto reductase family 1, member B1 
AKR1B10               0.720   aldo-keto reductase family 1, member B10 
AKR1B10L              0.682   aldo-keto reductase family 1, member B10-like [Homo...
AKR1CL2               0.547   aldo-keto reductase family 1, member C-like 2 
AKR1D1                0.491   aldo-keto reductase family 1, member D1 
AKR1A1                0.480   aldo-keto reductase family 1, member A1 
AKR1A1                0.480   aldo-keto reductase family 1, member A1 
AKR1C1                0.475   aldo-keto reductase family 1, member C1 
AKR1C2                0.472   aldo-keto reductase family 1, member C2 
AKR1C2                0.472   aldo-keto reductase family 1, member C2 
AKR1C4                0.469   aldo-keto reductase family 1, member C4 
AKR1C3                0.464   aldo-keto reductase family 1, member C3 
LOC100134257          0.150   hypothetical protein LOC100134257 
KCNAB1                0.032   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.030   potassium voltage-gated channel, shaker-related subf...
KCNAB2                0.030   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.029   potassium voltage-gated channel, shaker-related subf...
KCNAB2                0.029   potassium voltage-gated channel, shaker-related subfa...
DNM1                  0.011   dynamin 1 isoform 2 
DNM1                  0.011   dynamin 1 isoform 1 
KIAA1430              0.011   hypothetical protein LOC57587 
KCNAB3                0.010   potassium voltage-gated channel, shaker-related subf...
USH2A                 0.008   usherin isoform B 
GCLM                  0.008   glutamate-cysteine ligase regulatory protein 
CIITA                 0.006   class II transactivator 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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