Guide to the Human Genome
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Name: AKR1C4 Sequence: fasta or formatted (323aa) NCBI GI: 24497585
Description:

aldo-keto reductase family 1, member C4

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         19           1
 C cysteine            2.2          7           1
 D aspartate           6.5         21           1
 E glutamate           6.2         20           2
 F phenylalanine       4.3         14           2
 G glycine             4.3         14           1
 H histidine           2.5          8           1
 I isoleucine          3.7         12           1
 K lysine              7.7         25           2
 L leucine            11.8         38           2
 M methionine          2.8          9           1
 N asparagine          4.6         15           2
 P proline             6.2         20           2
 Q glutamine           5.0         16           1
 R arginine            4.3         14           1
 S serine              5.0         16           2
 T threonine           3.1         10           1
 V valine              8.4         27           3
 W tryptophan          0.9          3           1
 Y tyrosine            4.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldo-keto reductase family 1, member C4 
AKR1C1                0.837   aldo-keto reductase family 1, member C1 
AKR1C3                0.837   aldo-keto reductase family 1, member C3 
AKR1C2                0.821   aldo-keto reductase family 1, member C2 
AKR1C2                0.821   aldo-keto reductase family 1, member C2 
AKR1D1                0.568   aldo-keto reductase family 1, member D1 
AKR1B1                0.460   aldo-keto reductase family 1, member B1 
AKR1B10               0.435   aldo-keto reductase family 1, member B10 
AKR1B10L              0.413   aldo-keto reductase family 1, member B10-like [Homo...
AKR1CL2               0.389   aldo-keto reductase family 1, member C-like 2 
AKR1A1                0.378   aldo-keto reductase family 1, member A1 
AKR1A1                0.378   aldo-keto reductase family 1, member A1 
LOC100134257          0.278   hypothetical protein LOC100134257 
AKR7L                 0.047   aflatoxin B1 aldehyde reductase 3 isoform 2 
AKR7L                 0.047   aflatoxin B1 aldehyde reductase 3 isoform 1 
AKR7A3                0.039   aldo-keto reductase family 7, member A3 
AKR7A2                0.030   aldo-keto reductase family 7, member A2 
ANPEP                 0.017   membrane alanine aminopeptidase precursor 
KCNAB1                0.013   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.013   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.013   potassium voltage-gated channel, shaker-related subf...
KCNAB2                0.011   potassium voltage-gated channel, shaker-related subfa...
KCNAB2                0.011   potassium voltage-gated channel, shaker-related subf...
NSDHL                 0.008   NAD(P) dependent steroid dehydrogenase-like 
NSDHL                 0.008   NAD(P) dependent steroid dehydrogenase-like 
KCNAB3                0.006   potassium voltage-gated channel, shaker-related subf...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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