Guide to the Human Genome
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Name: AKR1D1 Sequence: fasta or formatted (326aa) NCBI GI: 5174695
Description:

aldo-keto reductase family 1, member D1

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Bile Acids and Other Cholesterol Derivatives

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         19           2
 C cysteine            1.8          6           1
 D aspartate           4.9         16           1
 E glutamate           7.7         25           3
 F phenylalanine       3.7         12           1
 G glycine             5.2         17           1
 H histidine           3.1         10           1
 I isoleucine          7.1         23           2
 K lysine              7.1         23           1
 L leucine             9.5         31           2
 M methionine          1.8          6           1
 N asparagine          5.5         18           1
 P proline             6.1         20           2
 Q glutamine           3.1         10           2
 R arginine            5.5         18           2
 S serine              5.5         18           2
 T threonine           4.0         13           1
 V valine              6.7         22           3
 W tryptophan          1.5          5           1
 Y tyrosine            4.3         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldo-keto reductase family 1, member D1 
AKR1C1                0.576   aldo-keto reductase family 1, member C1 
AKR1C2                0.573   aldo-keto reductase family 1, member C2 
AKR1C2                0.573   aldo-keto reductase family 1, member C2 
AKR1C4                0.560   aldo-keto reductase family 1, member C4 
AKR1C3                0.556   aldo-keto reductase family 1, member C3 
AKR1B1                0.475   aldo-keto reductase family 1, member B1 
AKR1B10               0.464   aldo-keto reductase family 1, member B10 
AKR1B10L              0.435   aldo-keto reductase family 1, member B10-like [Homo...
AKR1CL2               0.392   aldo-keto reductase family 1, member C-like 2 
AKR1A1                0.379   aldo-keto reductase family 1, member A1 
AKR1A1                0.379   aldo-keto reductase family 1, member A1 
LOC100134257          0.180   hypothetical protein LOC100134257 
AKR7A2                0.026   aldo-keto reductase family 7, member A2 
MOAP1                 0.020   modulator of apoptosis 1 
CARD14                0.008   caspase recruitment domain protein 14 isoform 1 [Hom...
NSDHL                 0.008   NAD(P) dependent steroid dehydrogenase-like 
NSDHL                 0.008   NAD(P) dependent steroid dehydrogenase-like 
KCNAB2                0.008   potassium voltage-gated channel, shaker-related subfa...
KCNAB2                0.008   potassium voltage-gated channel, shaker-related subf...
GCLM                  0.008   glutamate-cysteine ligase regulatory protein 
INPP5B                0.008   inositol polyphosphate-5-phosphatase, 75kDa precurs...
CNKSR3                0.006   CNKSR family member 3 
KCNAB1                0.006   potassium voltage-gated channel, shaker-related subf...
CCDC40                0.006   coiled-coil domain containing 40 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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