Guide to the Human Genome
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Name: AKR1C3 Sequence: fasta or formatted (323aa) NCBI GI: 24497583
Description:

aldo-keto reductase family 1, member C3

Referenced in:

Alcohol and Aldehyde Dehydrogenases
Steroid Hormones

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         22           1
 C cysteine            2.2          7           1
 D aspartate           6.5         21           1
 E glutamate           6.2         20           2
 F phenylalanine       4.0         13           1
 G glycine             4.3         14           1
 H histidine           3.1         10           1
 I isoleucine          4.3         14           1
 K lysine              8.0         26           2
 L leucine            10.8         35           2
 M methionine          1.9          6           1
 N asparagine          5.0         16           2
 P proline             5.6         18           2
 Q glutamine           3.7         12           1
 R arginine            5.3         17           2
 S serine              7.1         23           1
 T threonine           2.8          9           2
 V valine              7.1         23           3
 W tryptophan          0.9          3           1
 Y tyrosine            4.3         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldo-keto reductase family 1, member C3 
AKR1C1                0.882   aldo-keto reductase family 1, member C1 
AKR1C2                0.872   aldo-keto reductase family 1, member C2 
AKR1C2                0.872   aldo-keto reductase family 1, member C2 
AKR1C4                0.839   aldo-keto reductase family 1, member C4 
AKR1D1                0.565   aldo-keto reductase family 1, member D1 
AKR1B1                0.457   aldo-keto reductase family 1, member B1 
AKR1B10               0.430   aldo-keto reductase family 1, member B10 
AKR1B10L              0.411   aldo-keto reductase family 1, member B10-like [Homo...
AKR1CL2               0.376   aldo-keto reductase family 1, member C-like 2 
AKR1A1                0.365   aldo-keto reductase family 1, member A1 
AKR1A1                0.365   aldo-keto reductase family 1, member A1 
LOC100134257          0.310   hypothetical protein LOC100134257 
AKR7L                 0.041   aflatoxin B1 aldehyde reductase 3 isoform 2 
AKR7L                 0.041   aflatoxin B1 aldehyde reductase 3 isoform 1 
AKR7A3                0.033   aldo-keto reductase family 7, member A3 
AKR7A2                0.025   aldo-keto reductase family 7, member A2 
KCNAB1                0.022   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.022   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.022   potassium voltage-gated channel, shaker-related subf...
KCNAB2                0.014   potassium voltage-gated channel, shaker-related subfa...
KCNAB2                0.014   potassium voltage-gated channel, shaker-related subf...
KCNAB3                0.009   potassium voltage-gated channel, shaker-related subf...
AFF4                  0.009   ALL1 fused gene from 5q31 
IMMT                  0.008   inner membrane protein, mitochondrial isoform 3 [Ho...
IMMT                  0.008   inner membrane protein, mitochondrial isoform 2 [Ho...
IMMT                  0.008   inner membrane protein, mitochondrial isoform 1 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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