Guide to the Human Genome
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Name: AKR1A1 Sequence: fasta or formatted (325aa) NCBI GI: 5174391
Description:

aldo-keto reductase family 1, member A1

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Other entries for this name:
alt mRNA [325aa] aldo-keto reductase family 1, member A1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         29           2
 C cysteine            1.8          6           1
 D aspartate           5.2         17           2
 E glutamate           6.8         22           2
 F phenylalanine       2.5          8           1
 G glycine             5.5         18           1
 H histidine           2.8          9           2
 I isoleucine          4.6         15           1
 K lysine              6.2         20           1
 L leucine            11.4         37           2
 M methionine          1.5          5           1
 N asparagine          3.7         12           1
 P proline             7.7         25           1
 Q glutamine           4.0         13           1
 R arginine            4.9         16           1
 S serine              4.9         16           2
 T threonine           3.7         12           1
 V valine              7.4         24           2
 W tryptophan          2.2          7           1
 Y tyrosine            4.3         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aldo-keto reductase family 1, member A1 
AKR1A1                1.000   aldo-keto reductase family 1, member A1 
AKR1B1                0.464   aldo-keto reductase family 1, member B1 
AKR1B10               0.446   aldo-keto reductase family 1, member B10 
AKR1B10L              0.427   aldo-keto reductase family 1, member B10-like [Homo...
AKR1C1                0.381   aldo-keto reductase family 1, member C1 
AKR1C2                0.379   aldo-keto reductase family 1, member C2 
AKR1C2                0.379   aldo-keto reductase family 1, member C2 
AKR1D1                0.379   aldo-keto reductase family 1, member D1 
AKR1C4                0.373   aldo-keto reductase family 1, member C4 
AKR1C3                0.359   aldo-keto reductase family 1, member C3 
AKR1CL2               0.347   aldo-keto reductase family 1, member C-like 2 
LOC100134257          0.128   hypothetical protein LOC100134257 
KCNAB2                0.031   potassium voltage-gated channel, shaker-related subfa...
KCNAB2                0.031   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.029   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.029   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.029   potassium voltage-gated channel, shaker-related subf...
AKR7A2                0.028   aldo-keto reductase family 7, member A2 
KCNAB3                0.019   potassium voltage-gated channel, shaker-related subf...
AKR7L                 0.019   aflatoxin B1 aldehyde reductase 3 isoform 1 
AKR7L                 0.015   aflatoxin B1 aldehyde reductase 3 isoform 2 
AKR7A3                0.012   aldo-keto reductase family 7, member A3 
GCLM                  0.009   glutamate-cysteine ligase regulatory protein 
CACNA1E               0.008   calcium channel, voltage-dependent, R type, alpha 1E...
CYTSB                 0.008   spectrin domain with coiled-coils 1 NSP5a3b 
CYTSB                 0.008   spectrin domain with coiled-coils 1 NSP5b3b 
ZBTB2                 0.006   zinc finger and BTB domain containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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