Guide to the Human Genome
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Name: LOC100134257 Sequence: fasta or formatted (139aa) NCBI GI: 207028673
Description:

hypothetical protein LOC100134257

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         10           1
 C cysteine            0.7          1           1
 D aspartate           5.8          8           1
 E glutamate           6.5          9           2
 F phenylalanine       3.6          5           1
 G glycine             5.0          7           1
 H histidine           5.0          7           2
 I isoleucine          5.8          8           1
 K lysine              9.4         13           2
 L leucine            10.1         14           1
 M methionine          1.4          2           1
 N asparagine          4.3          6           2
 P proline             5.0          7           1
 Q glutamine           2.2          3           1
 R arginine            3.6          5           1
 S serine              8.6         12           1
 T threonine           2.2          3           1
 V valine              7.9         11           1
 W tryptophan          1.4          2           1
 Y tyrosine            4.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC100134257 
AKR1C2                0.869   aldo-keto reductase family 1, member C2 
AKR1C2                0.869   aldo-keto reductase family 1, member C2 
AKR1C1                0.838   aldo-keto reductase family 1, member C1 
AKR1C3                0.758   aldo-keto reductase family 1, member C3 
AKR1C4                0.681   aldo-keto reductase family 1, member C4 
AKR1D1                0.446   aldo-keto reductase family 1, member D1 
AKR1B1                0.362   aldo-keto reductase family 1, member B1 
AKR1B10               0.342   aldo-keto reductase family 1, member B10 
AKR1A1                0.319   aldo-keto reductase family 1, member A1 
AKR1A1                0.319   aldo-keto reductase family 1, member A1 
AKR1CL2               0.308   aldo-keto reductase family 1, member C-like 2 
AKR1B10L              0.288   aldo-keto reductase family 1, member B10-like [Homo...
AKR7L                 0.077   aflatoxin B1 aldehyde reductase 3 isoform 2 
AKR7L                 0.077   aflatoxin B1 aldehyde reductase 3 isoform 1 
AKR7A3                0.073   aldo-keto reductase family 7, member A3 
AKR7A2                0.058   aldo-keto reductase family 7, member A2 
KCNAB1                0.038   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.038   potassium voltage-gated channel, shaker-related subf...
KCNAB1                0.038   potassium voltage-gated channel, shaker-related subf...
KCNAB2                0.035   potassium voltage-gated channel, shaker-related subfa...
KCNAB2                0.035   potassium voltage-gated channel, shaker-related subf...
KCNAB3                0.031   potassium voltage-gated channel, shaker-related subf...
HAUS6                 0.012   HAUS augmin-like complex, subunit 6 
AFF4                  0.012   ALL1 fused gene from 5q31 
NF1                   0.012   neurofibromin isoform 1 
NF1                   0.012   neurofibromin isoform 2 
NF1                   0.012   neurofibromin isoform 3 
ARHGAP15              0.012   ARHGAP15 
RBM34                 0.008   RNA binding motif protein 34 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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