C3orf54 28104

Name: C3orf54	Sequence: fasta or formatted (287aa)		NCBI GI: 42766424
Description: hypothetical protein LOC389119		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 25 2 C cysteine 3.1 9 2 D aspartate 5.6 16 1 E glutamate 9.4 27 9 F phenylalanine 1.7 5 1 G glycine 7.3 21 3 H histidine 2.8 8 2 I isoleucine 0.7 2 2 K lysine 0.7 2 1 L leucine 10.8 31 2 M methionine 2.4 7 1 N asparagine 1.4 4 1 P proline 10.1 29 2 Q glutamine 4.5 13 1 R arginine 10.1 29 3 S serine 9.8 28 1 T threonine 3.1 9 1 V valine 5.2 15 2 W tryptophan 2.1 6 1 Y tyrosine 0.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC389119 C1orf183 0.096 hypothetical protein LOC55924 isoform 1 C1orf183 0.096 hypothetical protein LOC55924 isoform 2 SETD1B 0.028 SET domain containing 1B MICALL1 0.028 molecule interacting with Rab13 LOC100293005 0.019 PREDICTED: hypothetical protein LOC100289780 0.019 PREDICTED: hypothetical protein XP_002347375 MLL4 0.019 myeloid/lymphoid or mixed-lineage leukemia 4 CCDC9 0.019 coiled-coil domain containing 9 EN1 0.018 engrailed homeobox 1 BCAN 0.018 brevican isoform 2 BCAN 0.018 brevican isoform 1 CASZ1 0.018 castor homolog 1, zinc finger isoform a PELP1 0.018 proline, glutamic acid and leucine rich protein 1 [... RSHL1 0.018 radial spokehead-like 1 SMTN 0.018 smoothelin isoform b SMTN 0.018 smoothelin isoform c SMTN 0.018 smoothelin isoform a FBXO28 0.016 F-box protein 28 isoform b FBXO28 0.016 F-box protein 28 isoform a FAM123B 0.016 family with sequence similarity 123B HOXA3 0.016 homeobox A3 isoform a HOXA3 0.016 homeobox A3 isoform a RGS3 0.016 regulator of G-protein signalling 3 isoform 6 [Homo... RGS3 0.016 regulator of G-protein signalling 3 isoform 2 RGS3 0.016 regulator of G-protein signalling 3 isoform 1 MLL5 0.016 myeloid/lymphoid or mixed-lineage leukemia 5 MLL5 0.016 myeloid/lymphoid or mixed-lineage leukemia 5 MAGEA11 0.014 melanoma antigen family A, 11 isoform b MAGEA11 0.014 melanoma antigen family A, 11 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.