Guide to the Human Genome
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Name: FBXO28 Sequence: fasta or formatted (368aa) NCBI GI: 7662158
Description:

F-box protein 28 isoform a

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [179aa] F-box protein 28 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         29           4
 C cysteine            1.4          5           2
 D aspartate           3.5         13           1
 E glutamate           7.6         28           2
 F phenylalanine       1.6          6           1
 G glycine             5.7         21           4
 H histidine           1.4          5           1
 I isoleucine          4.1         15           2
 K lysine              6.0         22           2
 L leucine            10.6         39           2
 M methionine          3.3         12           1
 N asparagine          4.1         15           2
 P proline             6.2         23           4
 Q glutamine           9.0         33           3
 R arginine            8.7         32           2
 S serine              7.9         29           2
 T threonine           3.5         13           2
 V valine              6.0         22           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box protein 28 isoform a 
FBXO28                0.468   F-box protein 28 isoform b 
GOLGA6D               0.036   golgi autoantigen, golgin subfamily a, 6D 
LOC283685             0.036   PREDICTED: golgi autoantigen, golgin subfamily a-li...
GOLGA6C               0.036   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
LOC645202             0.036   PREDICTED: hypothetical protein LOC645202 
GOLGA6                0.036   golgi autoantigen, golgin subfamily a, 6 
LOC283685             0.035   PREDICTED: golgi autoantigen, golgin subfamily a-li...
GOLGA6B               0.035   golgi autoantigen, golgin subfamily a, 6B 
LOC727832             0.032   golgi autoantigen, golgin subfamily a-like 
LOC283767             0.032   golgi autoantigen, golgin subfamily a-like 
LOC651807             0.032   PREDICTED: hypothetical protein 
LOC647042             0.030   PREDICTED: hypothetical protein isoform 1 
LOC100133220          0.029   PREDICTED: hypothetical protein 
LOC440243             0.029   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC100133758          0.027   PREDICTED: hypothetical protein, partial 
LOC400352             0.027   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.027   PREDICTED: similar to Putative golgin subfamily A m...
LOC727909             0.026   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728636             0.025   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC727909             0.025   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC440295             0.025   hypothetical protein LOC440295 
DISC1                 0.023   disrupted in schizophrenia 1 isoform S 
DISC1                 0.023   disrupted in schizophrenia 1 isoform Lv 
DISC1                 0.023   disrupted in schizophrenia 1 isoform L 
SMC1A                 0.023   structural maintenance of chromosomes 1A 
PLEC1                 0.023   plectin 1 isoform 11 
PLEC1                 0.023   plectin 1 isoform 10 
PLEC1                 0.023   plectin 1 isoform 8 
PLEC1                 0.023   plectin 1 isoform 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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