Guide to the Human Genome
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Name: MAGEA11 Sequence: fasta or formatted (429aa) NCBI GI: 65507078
Description:

melanoma antigen family A, 11 isoform a

Referenced in:

Melanoma Antigen Family

Other entries for this name:
alt prot [400aa] melanoma antigen family A, 11 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         23           2
 C cysteine            1.4          6           1
 D aspartate           5.1         22           2
 E glutamate          10.3         44           2
 F phenylalanine       4.2         18           2
 G glycine             7.5         32           2
 H histidine           1.4          6           1
 I isoleucine          4.9         21           2
 K lysine              4.0         17           3
 L leucine             9.6         41           3
 M methionine          2.6         11           1
 N asparagine          2.1          9           1
 P proline             6.8         29           2
 Q glutamine           6.5         28           1
 R arginine            5.4         23           2
 S serine              8.4         36           2
 T threonine           4.4         19           1
 V valine              6.1         26           1
 W tryptophan          1.2          5           1
 Y tyrosine            3.0         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma antigen family A, 11 isoform a 
MAGEA11               0.924   melanoma antigen family A, 11 isoform b 
MAGEA4                0.417   melanoma antigen family A, 4 
MAGEA4                0.417   melanoma antigen family A, 4 
MAGEA4                0.417   melanoma antigen family A, 4 
MAGEA4                0.417   melanoma antigen family A, 4 
MAGEA8                0.411   melanoma antigen family A, 8 
MAGEA9B               0.399   melanoma antigen family A, 9 -like 
MAGEA9                0.399   melanoma antigen family A, 9 
MAGEA3                0.396   melanoma antigen family A, 3 
MAGEA6                0.394   melanoma antigen family A, 6 
MAGEA6                0.394   melanoma antigen family A, 6 
MAGEA12               0.390   melanoma antigen family A, 12 
MAGEA10               0.387   melanoma antigen family A, 10 
MAGEA10               0.387   melanoma antigen family A, 10 
MAGEA2                0.383   melanoma antigen family A, 2 
MAGEA2                0.383   melanoma antigen family A, 2 
MAGEA2                0.383   melanoma antigen family A, 2 
MAGEA2B               0.383   melanoma antigen family A, 2B 
MAGEA1                0.375   melanoma antigen family A, 1 
MAGEB16               0.315   melanoma antigen family B, 16 
MAGEB18               0.286   melanoma antigen family B, 18 
MAGEB4                0.277   melanoma antigen family B, 4 
MAGEB1                0.275   melanoma antigen family B, 1 
MAGEB1                0.275   melanoma antigen family B, 1 
MAGEB1                0.275   melanoma antigen family B, 1 
MAGEB17               0.263   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.263   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.263   PREDICTED: melanoma antigen family B, 17 
MAGEB10               0.261   melanoma antigen family B, 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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