Guide to the Human Genome
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Name: MAGEA11 Sequence: fasta or formatted (400aa) NCBI GI: 61744473
Description:

melanoma antigen family A, 11 isoform b

Referenced in:

Melanoma Antigen Family

Other entries for this name:
alt prot [429aa] melanoma antigen family A, 11 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         22           2
 C cysteine            1.2          5           1
 D aspartate           5.0         20           2
 E glutamate          10.5         42           2
 F phenylalanine       4.0         16           2
 G glycine             6.8         27           2
 H histidine           1.5          6           1
 I isoleucine          5.0         20           2
 K lysine              3.5         14           1
 L leucine             9.8         39           3
 M methionine          2.8         11           1
 N asparagine          2.2          9           1
 P proline             7.0         28           2
 Q glutamine           6.5         26           1
 R arginine            4.8         19           2
 S serine              8.5         34           2
 T threonine           4.5         18           1
 V valine              6.5         26           1
 W tryptophan          1.2          5           1
 Y tyrosine            3.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanoma antigen family A, 11 isoform b 
MAGEA11               0.994   melanoma antigen family A, 11 isoform a 
MAGEA4                0.448   melanoma antigen family A, 4 
MAGEA4                0.448   melanoma antigen family A, 4 
MAGEA4                0.448   melanoma antigen family A, 4 
MAGEA4                0.448   melanoma antigen family A, 4 
MAGEA8                0.442   melanoma antigen family A, 8 
MAGEA9B               0.429   melanoma antigen family A, 9 -like 
MAGEA9                0.429   melanoma antigen family A, 9 
MAGEA3                0.426   melanoma antigen family A, 3 
MAGEA6                0.424   melanoma antigen family A, 6 
MAGEA6                0.424   melanoma antigen family A, 6 
MAGEA12               0.420   melanoma antigen family A, 12 
MAGEA10               0.416   melanoma antigen family A, 10 
MAGEA10               0.416   melanoma antigen family A, 10 
MAGEA2                0.412   melanoma antigen family A, 2 
MAGEA2                0.412   melanoma antigen family A, 2 
MAGEA2                0.412   melanoma antigen family A, 2 
MAGEA2B               0.412   melanoma antigen family A, 2B 
MAGEA1                0.403   melanoma antigen family A, 1 
MAGEB16               0.339   melanoma antigen family B, 16 
MAGEB18               0.307   melanoma antigen family B, 18 
MAGEB4                0.298   melanoma antigen family B, 4 
MAGEB1                0.296   melanoma antigen family B, 1 
MAGEB1                0.296   melanoma antigen family B, 1 
MAGEB1                0.296   melanoma antigen family B, 1 
MAGEB17               0.283   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.283   PREDICTED: melanoma antigen family B, 17 
MAGEB17               0.283   PREDICTED: melanoma antigen family B, 17 
MAGEB10               0.280   melanoma antigen family B, 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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