BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|42734503 membrane component chromosome 11 surface marker 1 isoform 2 [Homo sapiens] (694 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|42734503 membrane component chromosome 11 surface marker 1 is... 1397 0.0 gi|42558250 membrane component chromosome 11 surface marker 1 is... 1383 0.0 gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens] 222 1e-57 gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens] 222 1e-57 gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens] 179 6e-45 gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 48 3e-05 gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s... 48 3e-05 gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 47 6e-05 gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 47 8e-05 gi|150170670 piccolo isoform 2 [Homo sapiens] 45 3e-04 gi|150378539 piccolo isoform 1 [Homo sapiens] 45 3e-04 gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 45 3e-04 gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 45 3e-04 gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 45 3e-04 gi|212549553 interleukin enhancer binding factor 3 isoform d [Ho... 44 5e-04 gi|24234750 interleukin enhancer binding factor 3 isoform a [Hom... 44 5e-04 gi|146134388 YLP motif containing 1 [Homo sapiens] 44 5e-04 gi|56117844 synovial sarcoma translocation, chromosome 18 isofor... 43 9e-04 gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 43 9e-04 gi|118498356 kinectin 1 isoform a [Homo sapiens] 43 0.001 gi|33620775 kinectin 1 isoform a [Homo sapiens] 43 0.001 gi|164519084 RAB GTPase activating protein 1 [Homo sapiens] 43 0.001 gi|27262647 ataxin 2 related protein isoform A [Homo sapiens] 43 0.001 gi|56117846 synovial sarcoma translocation, chromosome 18 isofor... 42 0.001 gi|24431935 reticulon 4 isoform A [Homo sapiens] 42 0.001 gi|119943102 CREB binding protein isoform b [Homo sapiens] 42 0.001 gi|119943104 CREB binding protein isoform a [Homo sapiens] 42 0.001 gi|14141161 heterogeneous nuclear ribonucleoprotein U isoform b ... 42 0.001 gi|74136883 heterogeneous nuclear ribonucleoprotein U isoform a ... 42 0.001 gi|148277037 AP2 associated kinase 1 [Homo sapiens] 42 0.001 >gi|42734503 membrane component chromosome 11 surface marker 1 isoform 2 [Homo sapiens] Length = 694 Score = 1397 bits (3616), Expect = 0.0 Identities = 694/694 (100%), Positives = 694/694 (100%) Query: 1 MPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGV 60 MPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGV Sbjct: 1 MPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGV 60 Query: 61 IDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALS 120 IDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALS Sbjct: 61 IDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALS 120 Query: 121 QDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSE 180 QDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSE Sbjct: 121 QDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSE 180 Query: 181 EELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERV 240 EELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERV Sbjct: 181 EELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERV 240 Query: 241 FQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFM 300 FQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFM Sbjct: 241 FQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFM 300 Query: 301 AETQFTSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQ 360 AETQFTSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQ Sbjct: 301 AETQFTSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQ 360 Query: 361 DLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQP 420 DLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQP Sbjct: 361 DLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQP 420 Query: 421 NQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTA 480 NQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTA Sbjct: 421 NQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTA 480 Query: 481 SSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQ 540 SSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQ Sbjct: 481 SSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQ 540 Query: 541 YQASYNQSFSSQPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRS 600 YQASYNQSFSSQPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRS Sbjct: 541 YQASYNQSFSSQPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRS 600 Query: 601 NQPYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPR 660 NQPYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPR Sbjct: 601 NQPYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPR 660 Query: 661 DYSGYQRDGYQQNFKRGSGQSGPRGAPRGNILWW 694 DYSGYQRDGYQQNFKRGSGQSGPRGAPRGNILWW Sbjct: 661 DYSGYQRDGYQQNFKRGSGQSGPRGAPRGNILWW 694 >gi|42558250 membrane component chromosome 11 surface marker 1 isoform 1 [Homo sapiens] Length = 709 Score = 1383 bits (3580), Expect = 0.0 Identities = 689/689 (100%), Positives = 689/689 (100%) Query: 1 MPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGV 60 MPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGV Sbjct: 1 MPSATSHSGSGSKSSGPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILGV 60 Query: 61 IDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALS 120 IDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALS Sbjct: 61 IDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALS 120 Query: 121 QDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSE 180 QDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSE Sbjct: 121 QDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSE 180 Query: 181 EELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERV 240 EELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERV Sbjct: 181 EELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERV 240 Query: 241 FQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFM 300 FQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFM Sbjct: 241 FQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFM 300 Query: 301 AETQFTSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQ 360 AETQFTSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQ Sbjct: 301 AETQFTSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQ 360 Query: 361 DLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQP 420 DLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQP Sbjct: 361 DLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQP 420 Query: 421 NQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTA 480 NQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTA Sbjct: 421 NQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTA 480 Query: 481 SSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQ 540 SSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQ Sbjct: 481 SSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQ 540 Query: 541 YQASYNQSFSSQPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRS 600 YQASYNQSFSSQPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRS Sbjct: 541 YQASYNQSFSSQPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRS 600 Query: 601 NQPYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPR 660 NQPYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPR Sbjct: 601 NQPYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPR 660 Query: 661 DYSGYQRDGYQQNFKRGSGQSGPRGAPRG 689 DYSGYQRDGYQQNFKRGSGQSGPRGAPRG Sbjct: 661 DYSGYQRDGYQQNFKRGSGQSGPRGAPRG 689 >gi|50428933 C1q domain containing 1 isoform 1 [Homo sapiens] Length = 1127 Score = 222 bits (565), Expect = 1e-57 Identities = 162/524 (30%), Positives = 244/524 (46%), Gaps = 41/524 (7%) Query: 2 PSATSHSGSGSKSS--GPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILG 59 PSA+S S SS G PSG S E +A P H G ++ L Sbjct: 50 PSASSVSMVQLFSSPFGYQSPSGHSEEEREGNMKSAKPQVNHSQHGESQRALSPLQSTLS 109 Query: 60 ------------------VIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQE 101 + K+RN+EKKK KL+DY++R+ GE LN DQL+AV KY+E Sbjct: 110 SAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYEE 169 Query: 102 VTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGD 161 V +NLEFAKELQ++F LS D+ K KK RRE +++ EAE+K+L+T+L++QYVL L Sbjct: 170 VLHNLEFAKELQKTFSGLSLDLLKAQKKAQRREHMLKLEAEKKKLRTILQVQYVLQNLTQ 229 Query: 162 DEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGK 221 + V+ D K GLNG L +EL L +F KL PER+ SL + +Q E +S++ WDLLEG Sbjct: 230 EHVQKDFKGGLNGAVYLPSKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGS 289 Query: 222 EKPVCGTTYKVLKEIVERVFQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVPEAEPEPAE 281 EK V GTTYK LK+++ ++ S YF+S +N +E+E P E+ + ++E + Sbjct: 290 EKAVVGTTYKHLKDLLSKLLNSGYFESIPVPKN--AKEKE---VPLEEEMLIQSEKKTQL 344 Query: 282 EYTE------------QSEVESTEYVNRQFMAETQFTSGEKEQVDEWTVETVEVVNSLQQ 329 TE Q E++ E++NR++M E +++ + E+ W + N ++ Sbjct: 345 SKTESVKESESLMEFAQPEIQPQEFLNRRYMTEVDYSNKQGEE-QPWEADYARKPNLPKR 403 Query: 330 QPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAI 389 P E + + Q V ++ + I Sbjct: 404 WDMLTEPDGQEKKQ-ESFKSWEASGKHQEVSKPAVSLEQRKQDTSKLRSTLPEEQKKQEI 462 Query: 390 VSAQPMNPTQNMDMPQLVCPPVHSESRLAQ-PNQVPVQPEATQVPLVSSTSEGYTASQPL 448 ++P D P+ V E + + P PVQ + Q P T + +T S Sbjct: 463 SKSKPSPSQWKQDTPKSKAGYVQEEQKKQETPKLWPVQLQKEQDP-KKQTPKSWTPSMQS 521 Query: 449 YQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQV 492 Q + + P E D Q + + S SQ Q+ Sbjct: 522 EQNTTKSWTTPMCEEQDSKQPETPKSWENNVESQKHSLTSQSQI 565 Score = 180 bits (457), Expect = 3e-45 Identities = 149/448 (33%), Positives = 218/448 (48%), Gaps = 62/448 (13%) Query: 264 SAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFMAETQFTSGEKEQVDEWTVETVEV 323 + P E+Q +PE + + ++ VES ++ TS + W V T + Sbjct: 530 TTPMCEEQ-DSKQPETPKSW--ENNVESQKH---------SLTSQSQISPKSWGVATASL 577 Query: 324 V-------NSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDS 376 + L +P+ V +P + DP++R++++QDLM Q+QG NF+Q+S Sbjct: 578 IPNDQLLPRKLNTEPKDVPKPVHQPVGSSSTLPKDPVLRKEKLQDLMTQIQGTCNFMQES 637 Query: 377 MLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQP-EATQVPLV 435 +LDF+ + AI ++QP + T P E L+ + +P +AT P+ Sbjct: 638 VLDFDKPS--SAIPTSQPPSATPGS-------PVASKEQNLSSQSDFLQEPLQATSSPVT 688 Query: 436 SSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLP--AASQPQVF 493 S++ + S TE + P +A I ++ +S P A Q F Sbjct: 689 CSSNACLVTTDQASSGSE-TEFMTSETP----EAAIPPGKQPSSLASPNPPMAKGSEQGF 743 Query: 494 QAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSS-- 551 Q S P SS + +N APFQ+MQTVFN+NAP+PP E E +++ Y YNQSF++ Sbjct: 744 Q---SPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEI--KESPYSPGYNQSFTTAS 798 Query: 552 --QPHQVEQTELQQEQL---QTVVGTYHGSPDQSHQVT-GNHQQPPQQNTGFPRSNQPYY 605 P Q + + EQ Q YH PD + QV+ G+ P Q FPR QP+ Sbjct: 799 TQTPPQCQLPSIHVEQTVHSQETAANYH--PDGTIQVSNGSLAFYPAQTNVFPRPTQPFV 856 Query: 606 NSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYR--PSFSNTPNSGYTQSQFSAPRDYS 663 NSRG RG +RG R + N YR P G++ G+D YR PS S N Y+Q QF A R+YS Sbjct: 857 NSRGSVRGCTRGGRLITNSYRSP-GGYK-GFDTYRGLPSIS---NGNYSQLQFQA-REYS 910 Query: 664 G---YQRDGYQQNFKRGSGQSGPRGAPR 688 G QRD +QQ +KRG GPR R Sbjct: 911 GAPYSQRDNFQQCYKRGGTSGGPRANSR 938 >gi|23503235 C1q domain containing 1 isoform 2 [Homo sapiens] Length = 1077 Score = 222 bits (565), Expect = 1e-57 Identities = 162/524 (30%), Positives = 244/524 (46%), Gaps = 41/524 (7%) Query: 2 PSATSHSGSGSKSS--GPPPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQILG 59 PSA+S S SS G PSG S E +A P H G ++ L Sbjct: 50 PSASSVSMVQLFSSPFGYQSPSGHSEEEREGNMKSAKPQVNHSQHGESQRALSPLQSTLS 109 Query: 60 ------------------VIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQE 101 + K+RN+EKKK KL+DY++R+ GE LN DQL+AV KY+E Sbjct: 110 SAASPSQAYETYIENGLICLKHKIRNIEKKKLKLEDYKDRLKSGEHLNPDQLEAVEKYEE 169 Query: 102 VTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGD 161 V +NLEFAKELQ++F LS D+ K KK RRE +++ EAE+K+L+T+L++QYVL L Sbjct: 170 VLHNLEFAKELQKTFSGLSLDLLKAQKKAQRREHMLKLEAEKKKLRTILQVQYVLQNLTQ 229 Query: 162 DEVRTDLKQGLNGVPILSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGK 221 + V+ D K GLNG L +EL L +F KL PER+ SL + +Q E +S++ WDLLEG Sbjct: 230 EHVQKDFKGGLNGAVYLPSKELDYLIKFSKLTCPERNESLSVEDQMEQSSLYFWDLLEGS 289 Query: 222 EKPVCGTTYKVLKEIVERVFQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVPEAEPEPAE 281 EK V GTTYK LK+++ ++ S YF+S +N +E+E P E+ + ++E + Sbjct: 290 EKAVVGTTYKHLKDLLSKLLNSGYFESIPVPKN--AKEKE---VPLEEEMLIQSEKKTQL 344 Query: 282 EYTE------------QSEVESTEYVNRQFMAETQFTSGEKEQVDEWTVETVEVVNSLQQ 329 TE Q E++ E++NR++M E +++ + E+ W + N ++ Sbjct: 345 SKTESVKESESLMEFAQPEIQPQEFLNRRYMTEVDYSNKQGEE-QPWEADYARKPNLPKR 403 Query: 330 QPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAI 389 P E + + Q V ++ + I Sbjct: 404 WDMLTEPDGQEKKQ-ESFKSWEASGKHQEVSKPAVSLEQRKQDTSKLRSTLPEEQKKQEI 462 Query: 390 VSAQPMNPTQNMDMPQLVCPPVHSESRLAQ-PNQVPVQPEATQVPLVSSTSEGYTASQPL 448 ++P D P+ V E + + P PVQ + Q P T + +T S Sbjct: 463 SKSKPSPSQWKQDTPKSKAGYVQEEQKKQETPKLWPVQLQKEQDP-KKQTPKSWTPSMQS 521 Query: 449 YQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQV 492 Q + + P E D Q + + S SQ Q+ Sbjct: 522 EQNTTKSWTTPMCEEQDSKQPETPKSWENNVESQKHSLTSQSQI 565 Score = 142 bits (359), Expect = 8e-34 Identities = 132/444 (29%), Positives = 197/444 (44%), Gaps = 104/444 (23%) Query: 264 SAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFMAETQFTSGEKEQVDEWTVETVEV 323 + P E+Q +PE + + ++ VES ++ TS + W V T + Sbjct: 530 TTPMCEEQ-DSKQPETPKSW--ENNVESQKH---------SLTSQSQISPKSWGVATASL 577 Query: 324 V-------NSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDS 376 + L +P+ V +P + DP++R++++QDLM Q+QG NF+Q+S Sbjct: 578 IPNDQLLPRKLNTEPKDVPKPVHQPVGSSSTLPKDPVLRKEKLQDLMTQIQGTCNFMQES 637 Query: 377 MLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVS 436 +LDF+ + AI ++QP P+ P P A++ +S Sbjct: 638 VLDFDKPS--SAIPTSQP-------------------------PSATPGSPVASKEQNLS 670 Query: 437 STSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVFQAG 496 S S+ L +P AT P+ + TDQ ++ S Sbjct: 671 SQSDF------LQEPLQATSS-----PVTCSSNACLVTTDQASSGSE------------- 706 Query: 497 TSKPLHSSGINVNAAPFQSMQT--VFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQ-- 552 F + +T VFN+NAP+PP E E +++ Y YNQSF++ Sbjct: 707 --------------TEFMTSETPEVFNVNAPLPPRKEQEI--KESPYSPGYNQSFTTAST 750 Query: 553 --PHQVEQTELQQEQLQTVVGTYHGSPDQSHQVT-GNHQQPPQQNTGFPRSNQPYYNSRG 609 P Q + + EQ T + PD + QV+ G+ P Q FPR QP+ NSRG Sbjct: 751 QTPPQCQLPSIHVEQTVHSQETANYHPDGTIQVSNGSLAFYPAQTNVFPRPTQPFVNSRG 810 Query: 610 VSRGGSRGARGLMNGYRGPANGFRGGYDGYR--PSFSNTPNSGYTQSQFSAPRDYSG--- 664 RG +RG R + N YR P G++ G+D YR PS S N Y+Q QF A R+YSG Sbjct: 811 SVRGCTRGGRLITNSYRSP-GGYK-GFDTYRGLPSIS---NGNYSQLQFQA-REYSGAPY 864 Query: 665 YQRDGYQQNFKRGSGQSGPRGAPR 688 QRD +QQ +KRG GPR R Sbjct: 865 SQRDNFQQCYKRGGTSGGPRANSR 888 >gi|50428931 C1q domain containing 1 isoform 3 [Homo sapiens] Length = 793 Score = 179 bits (455), Expect = 6e-45 Identities = 147/445 (33%), Positives = 217/445 (48%), Gaps = 57/445 (12%) Query: 264 SAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFMAETQFTSGEKEQVDEWTVETVEV 323 + P E+Q +PE + + ++ VES ++ TS + W V T + Sbjct: 197 TTPMCEEQ-DSKQPETPKSW--ENNVESQKH---------SLTSQSQISPKSWGVATASL 244 Query: 324 V-------NSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDS 376 + L +P+ V +P + DP++R++++QDLM Q+QG NF+Q+S Sbjct: 245 IPNDQLLPRKLNTEPKDVPKPVHQPVGSSSTLPKDPVLRKEKLQDLMTQIQGTCNFMQES 304 Query: 377 MLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQP-EATQVPLV 435 +LDF+ + AI ++QP + T P E L+ + +P +AT P+ Sbjct: 305 VLDFDKPS--SAIPTSQPPSATPGS-------PVASKEQNLSSQSDFLQEPLQATSSPVT 355 Query: 436 SSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLP--AASQPQVF 493 S++ + S TE + P +A I ++ +S P A Q F Sbjct: 356 CSSNACLVTTDQASSGSE-TEFMTSETP----EAAIPPGKQPSSLASPNPPMAKGSEQGF 410 Query: 494 QAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSS-- 551 Q S P SS + +N APFQ+MQTVFN+NAP+PP E E +++ Y YNQSF++ Sbjct: 411 Q---SPPASSSSVTINTAPFQAMQTVFNVNAPLPPRKEQEI--KESPYSPGYNQSFTTAS 465 Query: 552 --QPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVT-GNHQQPPQQNTGFPRSNQPYYNSR 608 P Q + + EQ T + PD + QV+ G+ P Q FPR QP+ NSR Sbjct: 466 TQTPPQCQLPSIHVEQTVHSQETANYHPDGTIQVSNGSLAFYPAQTNVFPRPTQPFVNSR 525 Query: 609 GVSRGGSRGARGLMNGYRGPANGFRGGYDGYR--PSFSNTPNSGYTQSQFSAPRDYSG-- 664 G RG +RG R + N YR P G++ G+D YR PS S N Y+Q QF A R+YSG Sbjct: 526 GSVRGCTRGGRLITNSYRSP-GGYK-GFDTYRGLPSIS---NGNYSQLQFQA-REYSGAP 579 Query: 665 -YQRDGYQQNFKRGSGQSGPRGAPR 688 QRD +QQ +KRG GPR R Sbjct: 580 YSQRDNFQQCYKRGGTSGGPRANSR 604 >gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] Length = 2382 Score = 47.8 bits (112), Expect = 3e-05 Identities = 102/476 (21%), Positives = 172/476 (36%), Gaps = 81/476 (17%) Query: 64 KLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDI 123 ++ +++K KGK D E + L +D + V+ QE+ + + ++ +D Sbjct: 505 RIEDIKKLKGKYKD-NEAIEFSFDLERDVPEDVA--QEMVESGYVCEGDHKTMAKAIKDR 561 Query: 124 QKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEEL 183 IK+ + QL+REE E+K+ + Q V L G+P S Sbjct: 562 VSLIKRKREQRQLVREEQEKKKQEESSLKQQVEQSSASQTGIKQLPSASTGIPTASTTSA 621 Query: 184 SLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERVFQS 243 S+ + + +PE D +L QY+ SI + L +G G++ VF Sbjct: 622 SVSTQ-VEPEEPEADQHQQL--QYQQPSISV--LSDGTVDSGQGSS----------VFTE 666 Query: 244 NYFDSTHNHQNGLCEEEEAASAPAVEDQVP---EAEPEPAEEYTEQSEVESTEYVNRQFM 300 + S G + E+A S V +P +A+ +P Y S Sbjct: 667 SRVSSQQTVSYG-SQHEQAHSTGTVPGHIPSTVQAQSQPHGVYPPSSVA----------- 714 Query: 301 AETQFTSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQ 360 Q S P SLT V+ + P+ Q+ Q Sbjct: 715 -------------------------------QGQSQGQPSSSSLTGVSSSQPIQHPQQQQ 743 Query: 361 DLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQP 420 + Q P +Q S+ + +AQP++ Q PQ V P V + +L Sbjct: 744 GIQ-QTAPPQQTVQYSL---SQTSTSSEATTAQPVSQPQ---APQ-VLPQVSAGKQLPVS 795 Query: 421 NQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRP--QKEPIDQIQATISLNTDQT 478 VP Q+P+ + S S + P P + P+ QI + + Sbjct: 796 QPVPTIQGEPQIPVATQPSVVPVHSGAHFLPVGQPLPTPLLPQYPVSQIPISTPHVSTAQ 855 Query: 479 TASSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPET 534 T SSLP AG ++PL + + A + TV + + +P + +P T Sbjct: 856 TGFSSLPI-----TMAAGITQPLLTLASSATTAAIPGVSTV--VPSQLPTLLQPVT 904 >gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo sapiens] Length = 4911 Score = 47.8 bits (112), Expect = 3e-05 Identities = 71/295 (24%), Positives = 103/295 (34%), Gaps = 62/295 (21%) Query: 323 VVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLD--- 379 V N P A P P P P +Q P R R+ + F + SM Sbjct: 2194 VTNQRHSDPYAHPPGTPRPGISVPYSQP-PATPRPRISE---------GFTRSSMTRPVL 2243 Query: 380 FENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTS 439 NQ DP + +AQ P +P + P + S+ +P Sbjct: 2244 MPNQ--DPFLQAAQNRGPA----LPGPLVRPPDTCSQTPRP-----------------PG 2280 Query: 440 EGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQT-TASSSLPAASQPQV-----F 493 G + + PS A ++P DQ T +D T+ ++ A QP+ F Sbjct: 2281 PGLSDTFSRVSPSAA------RDPYDQSPMTPRSQSDSFGTSQTAHDVADQPRPGSEGSF 2334 Query: 494 QAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQP 553 A ++ P+HS G Q V + PVP +T N QA + Q Sbjct: 2335 CASSNSPMHSQG--------QQFSGVSQLPGPVPTSGVTDTQNTVNMAQADTEKL--RQR 2384 Query: 554 HQVEQTELQQEQLQTVVGTYH----GSPDQSHQVTGNHQQPPQQNTGFPRSNQPY 604 ++ + LQQ+Q + + G SP H H QP N F R PY Sbjct: 2385 QKLREIILQQQQQKKIAGRQEKGSQDSPAVPHPGPLQHWQPENVNQAFTRPPPPY 2439 Score = 29.6 bits (65), Expect = 9.8 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 9/73 (12%) Query: 420 PNQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPI--DQIQATISLNTDQ 477 PNQ+PV P+ QVP S +G++ S + R P+ + +A +S + Sbjct: 2616 PNQLPVHPDLEQVP-PSQQEQGHSVH------SSSMVMRTLNHPLGGEFSEAPLSTSVPS 2668 Query: 478 TTASSSLPAASQP 490 T S +L +QP Sbjct: 2669 ETTSDNLQITTQP 2681 >gi|19718731 bromodomain-containing protein 4 isoform long [Homo sapiens] Length = 1362 Score = 47.0 bits (110), Expect = 6e-05 Identities = 113/598 (18%), Positives = 192/598 (32%), Gaps = 72/598 (12%) Query: 18 PPPSGSSGSEAAAGAGAAAPASQHPATGTGAVQTEAMKQI---LGVIDKKLRNLEKKKGK 74 PP S S S++++ + ++ S+ A E +K + L + + +N KKK K Sbjct: 482 PPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEK 541 Query: 75 LDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARRE 134 D +++ K +R + + + SK +E S ++ + K E Sbjct: 542 -DKKEKKKEKHKRKEEVEENKKSKAKEPPPKKTKKNNSSNSNVSKKEPAPMKSKPPPTYE 600 Query: 135 QLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLVD 194 ++ + + +L ++KL +++ + + P L ++ ++ + Sbjct: 601 SEEEDKCKPMSYEEKRQLSLDINKLPGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLK 660 Query: 195 PERDMSLRLNEQYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERVFQSNYFDSTHNHQN 254 P +LR E+Y + L K KP + + F S+ +S+ + Sbjct: 661 PS---TLRELERY------VTSCLRKKRKPQAEKVDVIAGSSKMKGFSSSESESSSESSS 711 Query: 255 GLCEEEEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFMAETQFTSGEKEQVD 314 E+ E AP + + + + +++ Sbjct: 712 SDSEDSETEMAPKSKKKGHPGREQKKHHHHHHQQMQQAP--------------------- 750 Query: 315 EWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQ 374 V PQ P P P P Q+ M P+ Q Sbjct: 751 ------APVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQ 804 Query: 375 DSMLD--FENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQV 432 +L+ DP QP+ + +PQ PP L QP + P Q Sbjct: 805 VPVLEPQLPGSVFDPIGHFTQPI-----LHLPQPELPP-----HLPQPPEHSTPPHLNQH 854 Query: 433 PLVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQV 492 +VS + Q +PS+ P P +S QT P A PQV Sbjct: 855 AVVSPPALHNALPQQPSRPSNRAAALP---PKPARPPAVSPALTQTPLLPQPPMAQPPQV 911 Query: 493 FQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQ 552 P A P SMQ + + V P L + Q+ Sbjct: 912 LLEDEEPP---------APPLTSMQMQLYLQ-QLQKVQPPTPLLPSVKVQSQPPPPLPPP 961 Query: 553 PHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGN--HQQPPQQNTGF-----PRSNQP 603 PH Q +LQQ+ P Q HQ H QP Q +T P+ QP Sbjct: 962 PHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQP 1019 >gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] Length = 1960 Score = 46.6 bits (109), Expect = 8e-05 Identities = 75/346 (21%), Positives = 135/346 (39%), Gaps = 70/346 (20%) Query: 69 EKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNL--------EFAKELQRSFMALS 120 +K + +L + Q + N+GER+ + D V+K Q +N+ + +L + F AL Sbjct: 1248 KKVEAQLQELQVKFNEGERVRTELADKVTKLQVELDNVTGLLSQSDSKSSKLTKDFSALE 1307 Query: 121 QDIQKT----------------------IKKTARREQLMREEAEQKRLKTVL-----ELQ 153 +Q T +K + REQL EE + L+ + ++ Sbjct: 1308 SQLQDTQELLQEENRQKLSLSTKLKQVEDEKNSFREQLEEEEEAKHNLEKQIATLHAQVA 1367 Query: 154 YVLDKLGD--------DEVRTDLKQGLNGVPILSEEELSLLDEFYK----LVDPERDMSL 201 + K+ D +EV+ L++ L G+ EE+++ D+ K L D+ + Sbjct: 1368 DMKKKMEDSVGCLETAEEVKRKLQKDLEGLSQRHEEKVAAYDKLEKTKTRLQQELDDLLV 1427 Query: 202 RLNEQYEHASIHLWDLLEGKEKPVCGTTYKVLKEIVERVFQSNYFDSTHNHQNGLCEEEE 261 L+ Q + A LE K+K ++L E E+ + Y EE + Sbjct: 1428 DLDHQRQSAC-----NLEKKQKKF----DQLLAE--EKTISAKY-----------AEERD 1465 Query: 262 AASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFMAETQFTSGEKEQVDEWTVETV 321 A A A E + A E + + E E +N+QF E + K+ V + E Sbjct: 1466 RAEAEAREKETKALSLARALEEAMEQKAE-LERLNKQFRTEMEDLMSSKDDVGKSVHELE 1524 Query: 322 EVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQ 367 + +L+QQ + + E + L +Q + AQ + Sbjct: 1525 KSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE 1570 Score = 41.2 bits (95), Expect = 0.003 Identities = 61/272 (22%), Positives = 114/272 (41%), Gaps = 32/272 (11%) Query: 62 DKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQ 121 + KL+ LE+++ L+D ++ K ++L +D++ E T NL +E +S L Sbjct: 970 EAKLKKLEEEQIILEDQNCKLAKEKKLLEDRI------AEFTTNLTEEEEKSKSLAKLKN 1023 Query: 122 DIQKTI---KKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVR-TDLKQGLNGVPI 177 + I ++ RRE+ R+E E+ R K + + D++ + + + +LK L Sbjct: 1024 KHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQL----A 1079 Query: 178 LSEEELSLLDEFYKLVDPERDMSLRLNEQYEHASIHLWDLLEG---------KEKPVCGT 228 EEEL + +++M+L+ + E L + LE K+K G Sbjct: 1080 KKEEELQAALARVEEEAAQKNMALKKIRELESQISELQEDLESERASRNKAEKQKRDLGE 1139 Query: 229 TYKVLKEIVERVFQS----NYFDSTHNHQNGLCE---EEEAASAPAVEDQVPEAEPEPAE 281 + LK +E S S + + + EEEA + A ++ + + E Sbjct: 1140 ELEALKTELEDTLDSTAAQQELRSKREQEVNILKKTLEEEAKTHEAQIQEMRQKHSQAVE 1199 Query: 282 EYTEQSEVESTEYVNRQFMAETQFTSGEKEQV 313 E EQ +E T+ V Q E+ ++ Sbjct: 1200 ELAEQ--LEQTKRVKANLEKAKQTLENERGEL 1229 >gi|150170670 piccolo isoform 2 [Homo sapiens] Length = 4935 Score = 44.7 bits (104), Expect = 3e-04 Identities = 71/293 (24%), Positives = 101/293 (34%), Gaps = 19/293 (6%) Query: 329 QQPQAASPSVPEP-HSLTPVAQADPLVRRQRVQDLMAQMQGPYN--FIQDSMLDFENQTL 385 QQP P +P H + A P + + +AQ G Q L Sbjct: 307 QQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPL 366 Query: 386 DPAIVSAQPMN---PTQNMDMPQLVCPPVHSESRLAQ---PNQVPVQPEATQVPLVSSTS 439 PA AQ P+ P+ + P AQ P + P Q T PL Sbjct: 367 GPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPG 426 Query: 440 EGYTASQPLYQPSHATEQRPQKEPIDQIQA--TISLNTDQTTASSSLPAASQPQVFQAGT 497 A P + + P K P Q T + T T S LP ++P Q G Sbjct: 427 LQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGP 486 Query: 498 SKPLHSSGINVNAAPFQSMQTVFNMNAP---VPPVNEPETLKQQNQYQASYNQSFSSQPH 554 +KP + Q T P P +P + K +Q S S + QP Sbjct: 487 AKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPS-AQQPS 545 Query: 555 QVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRSNQPYYNS 607 + + Q+ + V T G P Q V+ + +QPP Q G P++ P N+ Sbjct: 546 PAKPS--AQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQ--GLPKTICPLCNT 594 Score = 33.1 bits (74), Expect = 0.89 Identities = 58/246 (23%), Positives = 88/246 (35%), Gaps = 38/246 (15%) Query: 273 PEAEP-EPAEEYTEQ--SEVESTEYVNRQFMAETQF---TSGEKEQVDEWTVETVEVVNS 326 P A+P PA+ +Q SE S+E + +A+ T ++ + + V Sbjct: 361 PPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKP 420 Query: 327 LQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLD 386 L QQP SP+ + TPV Q P + AQ G Sbjct: 421 LAQQPGLQSPAKAPGPTKTPVQQPGP-------GKIPAQQAG------------------ 455 Query: 387 PAIVSAQPMNPTQ-NMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTSEGYTAS 445 P SAQ PT+ +P PP P P QP + + P S Sbjct: 456 PGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPP---PQQPGSAKPPSQQPGSTKPPPQ 512 Query: 446 QPLYQPSHATEQRP-QKEPIDQIQATISLNTDQTTASSSLPAASQPQVFQAGTSKPLHSS 504 QP P+ + Q+P +P Q + + Q + + S V Q G+ KPL Sbjct: 513 QP--GPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPP 570 Query: 505 GINVNA 510 ++ +A Sbjct: 571 TVSPSA 576 Score = 31.6 bits (70), Expect = 2.6 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Query: 413 SESRLAQPNQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATIS 472 S S +P +P+ ++P+V+ SE + P+ QP R P+ I A Sbjct: 4332 SSSARTKPTSLPISQSRGRIPIVAQNSEEESPLSPVGQPMGMA--RAAAGPLPPISAD-- 4387 Query: 473 LNTDQTTASSSLPAASQ 489 DQ +S SLP Q Sbjct: 4388 -TRDQFGSSHSLPEVQQ 4403 Score = 30.0 bits (66), Expect = 7.5 Identities = 45/217 (20%), Positives = 83/217 (38%), Gaps = 13/217 (5%) Query: 260 EEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFMAETQF----TSGEKEQVDE 315 ++ APA E P+AE P + TE + ++ AE Q T EK E Sbjct: 997 KKETKAPAAEKLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPE 1056 Query: 316 WTVETVEV-VNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQ 374 T + +N + P + + + + +P +Q+ + I Sbjct: 1057 STCPLCKTELNIGSKDPPNFNTCTECKNQVCNLCGFNPTPHLTEIQEWLCLNCQTQRAIS 1116 Query: 375 DSMLDFENQTLDPAIVSAQPMN-PTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVP 433 + D P+ A PM PT++ V P V +L + + V+ EA +V Sbjct: 1117 GQLGDIRKMPPAPSGPKASPMPVPTESSSQKTAVPPQV----KLVKKQEQEVKTEAEKV- 1171 Query: 434 LVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQAT 470 ++ E T S P T+Q+ ++ +++ +A+ Sbjct: 1172 ILEKVKE--TLSMEKIPPMVTTDQKQEESKLEKDKAS 1206 >gi|150378539 piccolo isoform 1 [Homo sapiens] Length = 5142 Score = 44.7 bits (104), Expect = 3e-04 Identities = 71/293 (24%), Positives = 101/293 (34%), Gaps = 19/293 (6%) Query: 329 QQPQAASPSVPEP-HSLTPVAQADPLVRRQRVQDLMAQMQGPYN--FIQDSMLDFENQTL 385 QQP P +P H + A P + + +AQ G Q L Sbjct: 307 QQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPL 366 Query: 386 DPAIVSAQPMN---PTQNMDMPQLVCPPVHSESRLAQ---PNQVPVQPEATQVPLVSSTS 439 PA AQ P+ P+ + P AQ P + P Q T PL Sbjct: 367 GPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPG 426 Query: 440 EGYTASQPLYQPSHATEQRPQKEPIDQIQA--TISLNTDQTTASSSLPAASQPQVFQAGT 497 A P + + P K P Q T + T T S LP ++P Q G Sbjct: 427 LQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGP 486 Query: 498 SKPLHSSGINVNAAPFQSMQTVFNMNAP---VPPVNEPETLKQQNQYQASYNQSFSSQPH 554 +KP + Q T P P +P + K +Q S S + QP Sbjct: 487 AKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPS-AQQPS 545 Query: 555 QVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRSNQPYYNS 607 + + Q+ + V T G P Q V+ + +QPP Q G P++ P N+ Sbjct: 546 PAKPS--AQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQ--GLPKTICPLCNT 594 Score = 33.1 bits (74), Expect = 0.89 Identities = 58/246 (23%), Positives = 88/246 (35%), Gaps = 38/246 (15%) Query: 273 PEAEP-EPAEEYTEQ--SEVESTEYVNRQFMAETQF---TSGEKEQVDEWTVETVEVVNS 326 P A+P PA+ +Q SE S+E + +A+ T ++ + + V Sbjct: 361 PPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKP 420 Query: 327 LQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLD 386 L QQP SP+ + TPV Q P + AQ G Sbjct: 421 LAQQPGLQSPAKAPGPTKTPVQQPGP-------GKIPAQQAG------------------ 455 Query: 387 PAIVSAQPMNPTQ-NMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTSEGYTAS 445 P SAQ PT+ +P PP P P QP + + P S Sbjct: 456 PGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPP---PQQPGSAKPPSQQPGSTKPPPQ 512 Query: 446 QPLYQPSHATEQRP-QKEPIDQIQATISLNTDQTTASSSLPAASQPQVFQAGTSKPLHSS 504 QP P+ + Q+P +P Q + + Q + + S V Q G+ KPL Sbjct: 513 QP--GPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPP 570 Query: 505 GINVNA 510 ++ +A Sbjct: 571 TVSPSA 576 Score = 31.6 bits (70), Expect = 2.6 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 5/77 (6%) Query: 413 SESRLAQPNQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATIS 472 S S +P +P+ ++P+V+ SE + P+ QP R P+ I A Sbjct: 4332 SSSARTKPTSLPISQSRGRIPIVAQNSEEESPLSPVGQPMGMA--RAAAGPLPPISAD-- 4387 Query: 473 LNTDQTTASSSLPAASQ 489 DQ +S SLP Q Sbjct: 4388 -TRDQFGSSHSLPEVQQ 4403 Score = 30.0 bits (66), Expect = 7.5 Identities = 45/217 (20%), Positives = 83/217 (38%), Gaps = 13/217 (5%) Query: 260 EEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFMAETQF----TSGEKEQVDE 315 ++ APA E P+AE P + TE + ++ AE Q T EK E Sbjct: 997 KKETKAPAAEKLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPE 1056 Query: 316 WTVETVEV-VNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQ 374 T + +N + P + + + + +P +Q+ + I Sbjct: 1057 STCPLCKTELNIGSKDPPNFNTCTECKNQVCNLCGFNPTPHLTEIQEWLCLNCQTQRAIS 1116 Query: 375 DSMLDFENQTLDPAIVSAQPMN-PTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVP 433 + D P+ A PM PT++ V P V +L + + V+ EA +V Sbjct: 1117 GQLGDIRKMPPAPSGPKASPMPVPTESSSQKTAVPPQV----KLVKKQEQEVKTEAEKV- 1171 Query: 434 LVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQAT 470 ++ E T S P T+Q+ ++ +++ +A+ Sbjct: 1172 ILEKVKE--TLSMEKIPPMVTTDQKQEESKLEKDKAS 1206 >gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] Length = 1012 Score = 44.7 bits (104), Expect = 3e-04 Identities = 67/272 (24%), Positives = 108/272 (39%), Gaps = 36/272 (13%) Query: 330 QPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAI 389 QPQA P+ P PH T + QA L ++ P+ +Q + Q P+ Sbjct: 233 QPQA--PTAPVPH--THIQQAPALHPQRPPSPHPPPHPSPHPPLQP-LTGSAGQPSAPS- 286 Query: 390 VSAQPMNPTQNMDMPQ-LVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTSEGYTASQ-- 446 AQP Q P L P+ QP +P Q Q PL +S + Y + Sbjct: 287 -HAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQ 345 Query: 447 -PLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVFQAGTSKPLHSSG 505 P Q + ++Q P+++P+ A +++ + ++ +P PQ + P H SG Sbjct: 346 LPASQSALQSQQPPREQPLPP--APLAMPHIKPPPTTPIPQLPAPQAHK----HPPHLSG 399 Query: 506 -----INVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQPHQVEQTE 560 +N N P +++ + +++ PP P L+ Q Q S +QP + Q++ Sbjct: 400 PSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPL--PSSPAQPPGLTQSQ 457 Query: 561 LQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQ 592 P SH TG HQ PQ Sbjct: 458 NLPP------------PPASHPPTGLHQVAPQ 477 Score = 39.7 bits (91), Expect = 0.010 Identities = 77/317 (24%), Positives = 117/317 (36%), Gaps = 52/317 (16%) Query: 260 EEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFMAETQFTS-GEKEQVDEWTV 318 +E AS+P ++ + E TE+++ S++ Q ++ S GE E D +V Sbjct: 83 KEEASSPLKSNK---RQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSV 139 Query: 319 --ETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDS 376 E + Q ++ SPS+P P + +D ++Q +Q +Q P Sbjct: 140 NDEGSSDPKDIDQDNRSTSPSIPSPQDNE--SDSDSSAQQQMLQAQPPALQAPTG----- 192 Query: 377 MLDFENQTLDPAIVSAQPMNP---TQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVP 433 + PA SA P P T PP S + +Q P QP+A P Sbjct: 193 --------VTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTA----SQAPNQPQAPTAP 240 Query: 434 LVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVF 493 + + + A P PS P P Q + S P+ +QP Sbjct: 241 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ-------PLTGSAGQPSAPSHAQP--- 290 Query: 494 QAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETL-KQQNQYQASYNQS-FSS 551 PLH G P S+Q + P PP +P L Q +Q QA S ++ Sbjct: 291 ------PLHGQG---PPGP-HSLQAGPLLQHPGPP--QPFGLPPQASQGQAPLGTSPAAA 338 Query: 552 QPHQVEQTELQQEQLQT 568 PH Q Q LQ+ Sbjct: 339 YPHTSLQLPASQSALQS 355 >gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] Length = 1566 Score = 44.7 bits (104), Expect = 3e-04 Identities = 67/272 (24%), Positives = 108/272 (39%), Gaps = 36/272 (13%) Query: 330 QPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAI 389 QPQA P+ P PH T + QA L ++ P+ +Q + Q P+ Sbjct: 787 QPQA--PTAPVPH--THIQQAPALHPQRPPSPHPPPHPSPHPPLQP-LTGSAGQPSAPS- 840 Query: 390 VSAQPMNPTQNMDMPQ-LVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTSEGYTASQ-- 446 AQP Q P L P+ QP +P Q Q PL +S + Y + Sbjct: 841 -HAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQ 899 Query: 447 -PLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVFQAGTSKPLHSSG 505 P Q + ++Q P+++P+ A +++ + ++ +P PQ + P H SG Sbjct: 900 LPASQSALQSQQPPREQPLPP--APLAMPHIKPPPTTPIPQLPAPQAHK----HPPHLSG 953 Query: 506 -----INVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQPHQVEQTE 560 +N N P +++ + +++ PP P L+ Q Q S +QP + Q++ Sbjct: 954 PSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPL--PSSPAQPPGLTQSQ 1011 Query: 561 LQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQ 592 P SH TG HQ PQ Sbjct: 1012 NLPP------------PPASHPPTGLHQVAPQ 1031 Score = 39.7 bits (91), Expect = 0.010 Identities = 77/317 (24%), Positives = 117/317 (36%), Gaps = 52/317 (16%) Query: 260 EEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFMAETQFTS-GEKEQVDEWTV 318 +E AS+P ++ + E TE+++ S++ Q ++ S GE E D +V Sbjct: 637 KEEASSPLKSNK---RQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSV 693 Query: 319 --ETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDS 376 E + Q ++ SPS+P P + +D ++Q +Q +Q P Sbjct: 694 NDEGSSDPKDIDQDNRSTSPSIPSPQDNE--SDSDSSAQQQMLQAQPPALQAPTG----- 746 Query: 377 MLDFENQTLDPAIVSAQPMNP---TQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVP 433 + PA SA P P T PP S + +Q P QP+A P Sbjct: 747 --------VTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTA----SQAPNQPQAPTAP 794 Query: 434 LVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVF 493 + + + A P PS P P Q + S P+ +QP Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ-------PLTGSAGQPSAPSHAQP--- 844 Query: 494 QAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETL-KQQNQYQASYNQS-FSS 551 PLH G P S+Q + P PP +P L Q +Q QA S ++ Sbjct: 845 ------PLHGQG---PPGP-HSLQAGPLLQHPGPP--QPFGLPPQASQGQAPLGTSPAAA 892 Query: 552 QPHQVEQTELQQEQLQT 568 PH Q Q LQ+ Sbjct: 893 YPHTSLQLPASQSALQS 909 >gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] Length = 1566 Score = 44.7 bits (104), Expect = 3e-04 Identities = 67/272 (24%), Positives = 108/272 (39%), Gaps = 36/272 (13%) Query: 330 QPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAI 389 QPQA P+ P PH T + QA L ++ P+ +Q + Q P+ Sbjct: 787 QPQA--PTAPVPH--THIQQAPALHPQRPPSPHPPPHPSPHPPLQP-LTGSAGQPSAPS- 840 Query: 390 VSAQPMNPTQNMDMPQ-LVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTSEGYTASQ-- 446 AQP Q P L P+ QP +P Q Q PL +S + Y + Sbjct: 841 -HAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQ 899 Query: 447 -PLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVFQAGTSKPLHSSG 505 P Q + ++Q P+++P+ A +++ + ++ +P PQ + P H SG Sbjct: 900 LPASQSALQSQQPPREQPLPP--APLAMPHIKPPPTTPIPQLPAPQAHK----HPPHLSG 953 Query: 506 -----INVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQPHQVEQTE 560 +N N P +++ + +++ PP P L+ Q Q S +QP + Q++ Sbjct: 954 PSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPL--PSSPAQPPGLTQSQ 1011 Query: 561 LQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQ 592 P SH TG HQ PQ Sbjct: 1012 NLPP------------PPASHPPTGLHQVAPQ 1031 Score = 39.7 bits (91), Expect = 0.010 Identities = 77/317 (24%), Positives = 117/317 (36%), Gaps = 52/317 (16%) Query: 260 EEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFMAETQFTS-GEKEQVDEWTV 318 +E AS+P ++ + E TE+++ S++ Q ++ S GE E D +V Sbjct: 637 KEEASSPLKSNK---RQREKVASDTEEADRTSSKKTKTQEISRPNSPSEGEGESSDSRSV 693 Query: 319 --ETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDS 376 E + Q ++ SPS+P P + +D ++Q +Q +Q P Sbjct: 694 NDEGSSDPKDIDQDNRSTSPSIPSPQDNE--SDSDSSAQQQMLQAQPPALQAPTG----- 746 Query: 377 MLDFENQTLDPAIVSAQPMNP---TQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVP 433 + PA SA P P T PP S + +Q P QP+A P Sbjct: 747 --------VTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTA----SQAPNQPQAPTAP 794 Query: 434 LVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVF 493 + + + A P PS P P Q + S P+ +QP Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ-------PLTGSAGQPSAPSHAQP--- 844 Query: 494 QAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETL-KQQNQYQASYNQS-FSS 551 PLH G P S+Q + P PP +P L Q +Q QA S ++ Sbjct: 845 ------PLHGQG---PPGP-HSLQAGPLLQHPGPP--QPFGLPPQASQGQAPLGTSPAAA 892 Query: 552 QPHQVEQTELQQEQLQT 568 PH Q Q LQ+ Sbjct: 893 YPHTSLQLPASQSALQS 909 >gi|212549553 interleukin enhancer binding factor 3 isoform d [Homo sapiens] Length = 898 Score = 43.9 bits (102), Expect = 5e-04 Identities = 47/169 (27%), Positives = 63/169 (37%), Gaps = 21/169 (12%) Query: 521 NMNAPVPPVNEPETLKQQNQYQASYNQSFSSQPHQVEQTELQQEQLQTV-------VGTY 573 N N+PVPP + + Q + SY + S HQ +Q Q G Sbjct: 725 NYNSPVPPKHAGKKQPHGGQQKPSYGSGYQS--HQGQQQSYNQSPYSNYGPPQGKQKGYN 782 Query: 574 HGSPDQSHQVTGNHQQPPQQNTGFPRSNQPYYNSRGVSRGGSRGARGLM------NGYRG 627 HG S+ + N + S Y S G S G S G+ G GY G Sbjct: 783 HGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYGSGGASYNPGSHGGYGG 842 Query: 628 PANG---FRGGYDGYRPSFSNTPNSGYTQSQFSAPRDYSGYQRDGYQQN 673 + G ++G GY S N+P SG Q+ P Y Q GY +N Sbjct: 843 GSGGGSSYQGKQGGYSQSNYNSPGSG--QNYSGPPSSYQSSQ-GGYGRN 888 Score = 32.7 bits (73), Expect = 1.2 Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 10/98 (10%) Query: 591 PQQNTGFPRSNQ--PYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPN 648 P G P N+ P N RG RGGS RG G+ G +G GY + + + Sbjct: 625 PGFGMGGPMHNEVPPPPNLRGRGRGGSIRGRGRGRGFGGANHG------GYMNAGAGYGS 678 Query: 649 SGYTQSQFSAPRDYSGYQRDGYQQNFKRGSGQSGPRGA 686 GY + SA YS + +G G G G G+ Sbjct: 679 YGYGGN--SATAGYSQFYSNGGHSGNASGGGGGGGGGS 714 >gi|24234750 interleukin enhancer binding factor 3 isoform a [Homo sapiens] Length = 894 Score = 43.9 bits (102), Expect = 5e-04 Identities = 47/169 (27%), Positives = 63/169 (37%), Gaps = 21/169 (12%) Query: 521 NMNAPVPPVNEPETLKQQNQYQASYNQSFSSQPHQVEQTELQQEQLQTV-------VGTY 573 N N+PVPP + + Q + SY + S HQ +Q Q G Sbjct: 721 NYNSPVPPKHAGKKQPHGGQQKPSYGSGYQS--HQGQQQSYNQSPYSNYGPPQGKQKGYN 778 Query: 574 HGSPDQSHQVTGNHQQPPQQNTGFPRSNQPYYNSRGVSRGGSRGARGLM------NGYRG 627 HG S+ + N + S Y S G S G S G+ G GY G Sbjct: 779 HGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYGSGGASYNPGSHGGYGG 838 Query: 628 PANG---FRGGYDGYRPSFSNTPNSGYTQSQFSAPRDYSGYQRDGYQQN 673 + G ++G GY S N+P SG Q+ P Y Q GY +N Sbjct: 839 GSGGGSSYQGKQGGYSQSNYNSPGSG--QNYSGPPSSYQSSQ-GGYGRN 884 Score = 32.7 bits (73), Expect = 1.2 Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 10/98 (10%) Query: 591 PQQNTGFPRSNQ--PYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPN 648 P G P N+ P N RG RGGS RG G+ G +G GY + + + Sbjct: 621 PGFGMGGPMHNEVPPPPNLRGRGRGGSIRGRGRGRGFGGANHG------GYMNAGAGYGS 674 Query: 649 SGYTQSQFSAPRDYSGYQRDGYQQNFKRGSGQSGPRGA 686 GY + SA YS + +G G G G G+ Sbjct: 675 YGYGGN--SATAGYSQFYSNGGHSGNASGGGGGGGGGS 710 >gi|146134388 YLP motif containing 1 [Homo sapiens] Length = 2146 Score = 43.9 bits (102), Expect = 5e-04 Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 44/301 (14%) Query: 272 VPEAEPEPA-EEYTEQSEVESTEYVN--RQFMAETQFTSGEKEQVDEWTVETVEVVNSLQ 328 +PEA P P T + S+ +++ Q +A+ Q + +Q+ + ++ V + L Sbjct: 27 LPEASPGPGYSSSTTPAAPSSSGFMSFREQHLAQLQ----QLQQMHQKQMQCVLQPHHLP 82 Query: 329 QQPQAASPSVP-------EPHSLTPVAQADPLVRRQRVQDLMAQM-----QGPYNFIQDS 376 P P +P +P P + Q+ Q QM GP + Sbjct: 83 PPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVP-- 140 Query: 377 MLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVS 436 ++ E+ P + M P+Q+ MP PP + +QP P QP +Q P Sbjct: 141 -MELESPPESPPVPPGSYMPPSQSY-MPPPQPPPSYYPPTSSQPYLPPAQPSPSQSP--- 195 Query: 437 STSEGYTASQPLYQPSHATEQ---RPQKEPIDQIQATISLNTDQTTASSSL---PAASQP 490 S+ Y A P Y S ++ Q + + QA+ S + + S L P ++ P Sbjct: 196 -PSQSYLAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPP 254 Query: 491 QVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFS 550 +PL S N + Q+ AP P +P T+ Q Q Q Y Q Sbjct: 255 GNKTTVQQEPLESGAKNKSTEQQQA--------APEP---DPSTMTPQEQQQYWYRQHLL 303 Query: 551 S 551 S Sbjct: 304 S 304 >gi|56117844 synovial sarcoma translocation, chromosome 18 isoform 2 [Homo sapiens] Length = 387 Score = 43.1 bits (100), Expect = 9e-04 Identities = 52/207 (25%), Positives = 72/207 (34%), Gaps = 34/207 (16%) Query: 498 SKPLHSSGINVNAAPFQSMQTVFNMNAPVP---PVNEPE------TLKQQNQYQAS---- 544 S + S G+ P MQ N P P P+ P T N +S Sbjct: 101 SHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSM 160 Query: 545 --YNQSFSSQPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGN---HQQPPQQNTGFPR 599 YN S S Q ++ Q Q + G Y P+ S Q HQQPP Q P+ Sbjct: 161 GGYNHSVPSSQSMPVQNQMTMSQGQPM-GNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQ 219 Query: 600 SNQPYYNSR--------GVSRGGSRGARGLMNGYR----GPANGFRGGYDGYRPSFSN-- 645 +Y + V++G + + YR GP + G D Y +S+ Sbjct: 220 GGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGG 279 Query: 646 -TPNSGYTQSQFSAPRDYSGYQRDGYQ 671 P G Q + G Q+D YQ Sbjct: 280 QGPPEGMNQQYYPDGNSQYGQQQDAYQ 306 >gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] Length = 2400 Score = 43.1 bits (100), Expect = 9e-04 Identities = 80/397 (20%), Positives = 142/397 (35%), Gaps = 33/397 (8%) Query: 219 EGKEKPVCGTTYKVLKEIVERVFQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVPEAEPE 278 EG E P + E VE + ++ D + E EEAA + Q PE+E Sbjct: 1904 EGAEAPEAEKEAQPETESVEAL-ETEGEDEPESEGAEAQEAEEAAQEAEGQTQ-PESEVI 1961 Query: 279 PAEEYTEQSEVESTEYVNRQFMAETQFTSGEKEQVDEWTVETVEVVNSLQQQPQAASPSV 338 ++E E+++ ES + + ETQ GE + E VE E +Q+ + A P Sbjct: 1962 ESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESE-DVEAPEAEGEMQEAEEEAQPE- 2019 Query: 339 PEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQ-PMNP 397 + +A P + Q++ + Q Q E + A+ + Sbjct: 2020 ------SDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQE 2073 Query: 398 TQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHATEQ 457 + P+ SE AQ + QPE+ V + E A + + P E Sbjct: 2074 AEGEAHPE-------SEDVDAQEAEGEAQPESEGVEAPEAEGEAQKA-EGIEAPETEGEA 2125 Query: 458 RPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQ 517 +P+ E I+ +A + P + + A S GI A ++ Sbjct: 2126 QPESEGIEAPEA----------EGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQP 2175 Query: 518 TVFNMNAP-VPPVNEPET---LKQQNQYQASYNQSFSSQPHQVEQTELQQEQLQTVVGTY 573 + + AP +PE+ + + +A P E+ + + E ++T Sbjct: 2176 ELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEG 2235 Query: 574 HGSPDQSHQVTGNHQQPPQQNTGFPRSNQPYYNSRGV 610 P+ + G + PQ + G +S + +S V Sbjct: 2236 EAQPESEGETQGEKKGSPQVSLGDGQSEEASESSSPV 2272 Score = 30.4 bits (67), Expect = 5.8 Identities = 43/208 (20%), Positives = 70/208 (33%), Gaps = 28/208 (13%) Query: 259 EEEAASAPAVEDQVPEAEPE--PAEEYTEQSEVESTEYVNRQFMAETQFTSGEKEQVD-E 315 E E AP E EAE E P E E E E E Q S + E + E Sbjct: 1847 ESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAE----------GEAQPESEDVETPEAE 1896 Query: 316 WTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQD 375 W V+ + + A P +L + +P Q+ ++ Sbjct: 1897 WEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQE-----------AEE 1945 Query: 376 SMLDFENQTL-DPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPL 434 + + E QT + ++ +Q + + V E++ A+ QPE+ V Sbjct: 1946 AAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGE---AQPESEDVEA 2002 Query: 435 VSSTSEGYTASQPLYQPSHATEQRPQKE 462 + E A + S E +P+ E Sbjct: 2003 PEAEGEMQEAEEEAQPESDGVEAQPKSE 2030 >gi|118498356 kinectin 1 isoform a [Homo sapiens] Length = 1357 Score = 42.7 bits (99), Expect = 0.001 Identities = 59/266 (22%), Positives = 119/266 (44%), Gaps = 27/266 (10%) Query: 56 QILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRS 115 ++L V +K+ + ++ K ++ +E + + QL SK QE+ N L+ +E + Sbjct: 820 ELLKVANKE-KTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNT 878 Query: 116 FMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGD----DEVRTDLKQG 171 A+ ++ +K + T + Q ++EE E + Q+ L + +E+ LK+ Sbjct: 879 MKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEK 938 Query: 172 LNGV----PILSEEELSLLDEFYKLVDPERDMSL------RLNEQ-YEHASI-----HLW 215 N + +L E E L + L D + + L +L +Q Y+ AS L Sbjct: 939 ENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELL 998 Query: 216 DLLEGKEKPVCGTTYKV--LKEIVERVFQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVP 273 ++ +EK + G ++ LK+ VE + N + +N E A++ ++D+V Sbjct: 999 KVISEREKEISGLWNELDSLKDAVEHQRKKN---NDLREKNWEAMEALASTEKMLQDKVN 1055 Query: 274 EAEPEPAEEYTEQSEVESTEYVNRQF 299 + E ++ E E+E+ E + + F Sbjct: 1056 KTSKE-RQQQVEAVELEAKEVLKKLF 1080 >gi|33620775 kinectin 1 isoform a [Homo sapiens] Length = 1357 Score = 42.7 bits (99), Expect = 0.001 Identities = 59/266 (22%), Positives = 119/266 (44%), Gaps = 27/266 (10%) Query: 56 QILGVIDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRS 115 ++L V +K+ + ++ K ++ +E + + QL SK QE+ N L+ +E + Sbjct: 820 ELLKVANKE-KTVQDLKQEIKALKEEIGNVQLEKAQQLSITSKVQELQNLLKGKEEQMNT 878 Query: 116 FMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGD----DEVRTDLKQG 171 A+ ++ +K + T + Q ++EE E + Q+ L + +E+ LK+ Sbjct: 879 MKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQHNLKEASSASQFEELEIVLKEK 938 Query: 172 LNGV----PILSEEELSLLDEFYKLVDPERDMSL------RLNEQ-YEHASI-----HLW 215 N + +L E E L + L D + + L +L +Q Y+ AS L Sbjct: 939 ENELKRLEAMLKERESDLSSKTQLLQDVQDENKLFKSQIEQLKQQNYQQASSFPPHEELL 998 Query: 216 DLLEGKEKPVCGTTYKV--LKEIVERVFQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVP 273 ++ +EK + G ++ LK+ VE + N + +N E A++ ++D+V Sbjct: 999 KVISEREKEISGLWNELDSLKDAVEHQRKKN---NDLREKNWEAMEALASTEKMLQDKVN 1055 Query: 274 EAEPEPAEEYTEQSEVESTEYVNRQF 299 + E ++ E E+E+ E + + F Sbjct: 1056 KTSKE-RQQQVEAVELEAKEVLKKLF 1080 >gi|164519084 RAB GTPase activating protein 1 [Homo sapiens] Length = 1069 Score = 42.7 bits (99), Expect = 0.001 Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 5/153 (3%) Query: 55 KQILGVIDKKLRNLEKKKGKLDDYQER-MNKGERLNQDQLDAVSKYQEVTNNLEFAKELQ 113 KQ L +++ R LE++ +L + R ++K E + + Y+++ + L ++ L+ Sbjct: 892 KQKLIDAEEEKRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQL--SERLE 949 Query: 114 RSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLN 173 + A +I+K +K E+ ++ R+K + + VLD+ D+E T LK L Sbjct: 950 KQQTANKVEIEKIRQKVDDCERCREFFNKEGRVKGISSTKEVLDEDTDEEKET-LKNQLR 1008 Query: 174 GVPI-LSEEELSLLDEFYKLVDPERDMSLRLNE 205 + + L++ +L L++ K+ D E + L LNE Sbjct: 1009 EMELELAQTKLQLVEAECKIQDLEHHLGLALNE 1041 >gi|27262647 ataxin 2 related protein isoform A [Homo sapiens] Length = 1075 Score = 42.7 bits (99), Expect = 0.001 Identities = 87/348 (25%), Positives = 120/348 (34%), Gaps = 52/348 (14%) Query: 338 VPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNP 397 +P+ H + P QA P + V + + QG Y + S+ + PA SA PM Sbjct: 714 IPQIH-MGPAVQA-PQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPA--SAPPMMQ 769 Query: 398 TQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQ-----------VPLVSSTSEGYTA-S 445 P LV +S P Q P QP Q P++ S T+ S Sbjct: 770 AAAAAGPPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGS 829 Query: 446 QPLYQPSHATEQRPQKE-PIDQ-IQATI---------SLNTDQTTASSSLPAASQPQVFQ 494 P S +T Q P E P Q + AT+ L+ Q +++ P SQPQ Sbjct: 830 HPQAIVSSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATT-PTGSQPQSQH 888 Query: 495 AGTSKPLHSSGINVNAAPFQSMQTVFNMNA--PVPPVNEPETLKQQNQYQ-----ASYNQ 547 A S H +G + Q Q +++ A PP P Q Q A Y Sbjct: 889 AAPSPVQHQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAI 948 Query: 548 SFSSQPHQ-VEQTELQQEQLQT-VVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRSNQPYY 605 PH + Q +QT + P H PPQ + G P+ P Sbjct: 949 HHQQLPHGFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQS 1008 Query: 606 NSRGVSR---------GGSRGARGLMNGYRGPANGFRGGYDGYRPSFS 644 +S G +G + G A GF GG D FS Sbjct: 1009 GVPALSASTPSPYPYIGHPQGEQ------PGQAPGFPGGADDRIREFS 1050 >gi|56117846 synovial sarcoma translocation, chromosome 18 isoform 1 [Homo sapiens] Length = 418 Score = 42.4 bits (98), Expect = 0.001 Identities = 56/227 (24%), Positives = 79/227 (34%), Gaps = 35/227 (15%) Query: 498 SKPLHSSGINVNAAPFQSMQTVFNMNAPVP---PVNEPE------TLKQQNQYQAS---- 544 S + S G+ P MQ N P P P+ P T N +S Sbjct: 101 SHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSM 160 Query: 545 --YNQSFSSQPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGN---HQQPPQQNTGFPR 599 YN S S Q ++ Q Q + G Y P+ S Q HQQPP Q P+ Sbjct: 161 GGYNHSVPSSQSMPVQNQMTMSQGQPM-GNYGPRPNMSMQPNQGPMMHQQPPSQQYNMPQ 219 Query: 600 SNQPYYNSR--------GVSRGGSRGARGLMNGYR----GPANGFRGGYDGYRPSFSN-- 645 +Y + V++G + + YR GP + G D Y +S+ Sbjct: 220 GGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGG 279 Query: 646 -TPNSGYTQSQFSAPRDYSGYQRDGY-QQNFKRGSGQSGPRGAPRGN 690 P G Q + + GYQ+ Y +Q + R S GN Sbjct: 280 QGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGN 326 >gi|24431935 reticulon 4 isoform A [Homo sapiens] Length = 1192 Score = 42.4 bits (98), Expect = 0.001 Identities = 61/282 (21%), Positives = 103/282 (36%), Gaps = 52/282 (18%) Query: 260 EEAASAPAVEDQVPEAEPEPAEEYTEQSEVESTEYVNRQFMAETQFTSGEKEQVDEWTVE 319 E+ +P V P+PA +Y QF+ E + E+E+ +E E Sbjct: 2 EDLDQSPLVSSSDSPPRPQPAFKY--------------QFVREPEDEEEEEEEEEEDEDE 47 Query: 320 TVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLD 379 +E + L+++P A + P P T A PL +D Sbjct: 48 DLEELEVLERKPAAGLSAAPVP---TAPAAGAPL------------------------MD 80 Query: 380 FENQTLDPA----IVSAQPMNPTQNMDM-PQLVCPPVHSESRLA----QPNQVPVQPEAT 430 F N + PA + +A P+ P + P V V + S L+ P+++P E Sbjct: 81 FGNDFVPPAPRGPLPAAPPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPP 140 Query: 431 QVPLVSSTSEGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQP 490 P + ++P++ P P P + S + D+T +LPAAS+P Sbjct: 141 ARPPPPPPASVSPQAEPVWTPPAPAPAAPPSTPAAPKRRGSSGSVDETL--FALPAASEP 198 Query: 491 QVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEP 532 + + + L N +A + +V A P P Sbjct: 199 VIRSSAENMDLKEQPGNTISAGQEDFPSVLLETAASLPSLSP 240 >gi|119943102 CREB binding protein isoform b [Homo sapiens] Length = 2404 Score = 42.4 bits (98), Expect = 0.001 Identities = 66/269 (24%), Positives = 93/269 (34%), Gaps = 27/269 (10%) Query: 354 VRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHS 413 +R+Q++Q + Q Q + Q P+ SA P PTQ PQ PP Sbjct: 1812 LRQQQIQHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPP--- 1868 Query: 414 ESRLAQPNQVPVQPEATQVPLVSST------SEGYTASQ------PLYQPSHATEQRPQK 461 AQP PV P V+ T S G SQ P P A E Q Sbjct: 1869 ----AQPQPSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQI 1924 Query: 462 EPIDQIQA---TISLNTDQTTASSSL-PAASQPQVFQAGTSKPLHSSG-INVNAAPFQSM 516 E Q Q +++N + + SQ +P SG + + P Q Sbjct: 1925 EREAQQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQ 1984 Query: 517 QTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQPHQVEQTELQQEQLQTVVGTYHGS 576 Q P+P + P + Q Q + + S QP + Q+ L+T+ S Sbjct: 1985 QAPLPQQQPMPGLPRP-VISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSP--SS 2041 Query: 577 PDQSHQVTGNHQQPPQQNTGFPRSNQPYY 605 P Q QV + PQ F + Y Sbjct: 2042 PQQQQQVLNILKSNPQLMAAFIKQRTAKY 2070 Score = 40.4 bits (93), Expect = 0.006 Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 35/280 (12%) Query: 330 QPQAASPSVPEPHSLT-PVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTL--D 386 Q S +VP P+ ++ PV + P + Q+ Q P + ++ + Q Sbjct: 1956 QMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAP---LPQQQPMPGLPRPVISMQAQAAVAG 2012 Query: 387 PAIVSAQP---MNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTSEGYT 443 P + S QP ++P+ D+ + + P + + N + P+ + T++ Y Sbjct: 2013 PRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAK-YV 2071 Query: 444 ASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVFQAGTSKPLHS 503 A+QP QP + +P +P + SL + + +P P QA Sbjct: 2072 ANQPGMQPQPGLQSQPGMQPQPGMHQQPSLQ-NLNAMQAGVPRPGVPPQQQA-------M 2123 Query: 504 SGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQPHQVEQTELQQ 563 G+N M P + P QY+ + Q Q +Q + QQ Sbjct: 2124 GGLNPQGQALNIMN----------PGHNPNMASMNPQYREMLRRQLLQQQQQQQQQQQQQ 2173 Query: 564 EQLQTVVGTYHGSPDQSHQVTGNHQ-QPPQQNTGFPRSNQ 602 +Q Q GS + + G+ Q Q PQ G+P + Q Sbjct: 2174 QQQQ------QGSAGMAGGMAGHGQFQQPQGPGGYPPAMQ 2207 Score = 32.3 bits (72), Expect = 1.5 Identities = 43/230 (18%), Positives = 78/230 (33%), Gaps = 21/230 (9%) Query: 262 AASAPAVEDQVPEA--EPEPAEEYTEQSEVESTEYVNRQFMAETQFTSGEKEQVDEWTVE 319 AA P+++ P P+PA + V S+ T + Sbjct: 825 AAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSG------QTPTPTPGSVPSATQTQSTP 878 Query: 320 TVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLD 379 TV+ Q PQ +P P P TP + + Q Q P + + Sbjct: 879 TVQAAAQAQVTPQPQTPVQP-PSVATP--------QSSQQQPTPVHAQPPGTPLSQAAAS 929 Query: 380 FENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTS 439 +N+ P+ V++ N Q P P + ++ + P E+ P Sbjct: 930 IDNRVPTPSSVASAETNSQQ----PGPDVPVLEMKTETQAEDTEPDPGESKGEPRSEMME 985 Query: 440 EGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQ 489 E + + + + EQ+ + +D+ + + + + SSS ASQ Sbjct: 986 EDLQGASQVKEETDIAEQKSEPMEVDEKKPEVKVEVKEEEESSSNGTASQ 1035 >gi|119943104 CREB binding protein isoform a [Homo sapiens] Length = 2442 Score = 42.4 bits (98), Expect = 0.001 Identities = 66/269 (24%), Positives = 93/269 (34%), Gaps = 27/269 (10%) Query: 354 VRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHS 413 +R+Q++Q + Q Q + Q P+ SA P PTQ PQ PP Sbjct: 1850 LRQQQIQHRLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPP--- 1906 Query: 414 ESRLAQPNQVPVQPEATQVPLVSST------SEGYTASQ------PLYQPSHATEQRPQK 461 AQP PV P V+ T S G SQ P P A E Q Sbjct: 1907 ----AQPQPSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQI 1962 Query: 462 EPIDQIQA---TISLNTDQTTASSSL-PAASQPQVFQAGTSKPLHSSG-INVNAAPFQSM 516 E Q Q +++N + + SQ +P SG + + P Q Sbjct: 1963 EREAQQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQ 2022 Query: 517 QTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQPHQVEQTELQQEQLQTVVGTYHGS 576 Q P+P + P + Q Q + + S QP + Q+ L+T+ S Sbjct: 2023 QAPLPQQQPMPGLPRP-VISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSP--SS 2079 Query: 577 PDQSHQVTGNHQQPPQQNTGFPRSNQPYY 605 P Q QV + PQ F + Y Sbjct: 2080 PQQQQQVLNILKSNPQLMAAFIKQRTAKY 2108 Score = 40.4 bits (93), Expect = 0.006 Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 35/280 (12%) Query: 330 QPQAASPSVPEPHSLT-PVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTL--D 386 Q S +VP P+ ++ PV + P + Q+ Q P + ++ + Q Sbjct: 1994 QMAPVSLNVPRPNQVSGPVMPSMPPGQWQQAP---LPQQQPMPGLPRPVISMQAQAAVAG 2050 Query: 387 PAIVSAQP---MNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTSEGYT 443 P + S QP ++P+ D+ + + P + + N + P+ + T++ Y Sbjct: 2051 PRMPSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAK-YV 2109 Query: 444 ASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQPQVFQAGTSKPLHS 503 A+QP QP + +P +P + SL + + +P P QA Sbjct: 2110 ANQPGMQPQPGLQSQPGMQPQPGMHQQPSLQ-NLNAMQAGVPRPGVPPQQQA-------M 2161 Query: 504 SGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQASYNQSFSSQPHQVEQTELQQ 563 G+N M P + P QY+ + Q Q +Q + QQ Sbjct: 2162 GGLNPQGQALNIMN----------PGHNPNMASMNPQYREMLRRQLLQQQQQQQQQQQQQ 2211 Query: 564 EQLQTVVGTYHGSPDQSHQVTGNHQ-QPPQQNTGFPRSNQ 602 +Q Q GS + + G+ Q Q PQ G+P + Q Sbjct: 2212 QQQQ------QGSAGMAGGMAGHGQFQQPQGPGGYPPAMQ 2245 Score = 32.3 bits (72), Expect = 1.5 Identities = 43/230 (18%), Positives = 78/230 (33%), Gaps = 21/230 (9%) Query: 262 AASAPAVEDQVPEA--EPEPAEEYTEQSEVESTEYVNRQFMAETQFTSGEKEQVDEWTVE 319 AA P+++ P P+PA + V S+ T + Sbjct: 863 AAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSG------QTPTPTPGSVPSATQTQSTP 916 Query: 320 TVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLD 379 TV+ Q PQ +P P P TP + + Q Q P + + Sbjct: 917 TVQAAAQAQVTPQPQTPVQP-PSVATP--------QSSQQQPTPVHAQPPGTPLSQAAAS 967 Query: 380 FENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTS 439 +N+ P+ V++ N Q P P + ++ + P E+ P Sbjct: 968 IDNRVPTPSSVASAETNSQQ----PGPDVPVLEMKTETQAEDTEPDPGESKGEPRSEMME 1023 Query: 440 EGYTASQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASSSLPAASQ 489 E + + + + EQ+ + +D+ + + + + SSS ASQ Sbjct: 1024 EDLQGASQVKEETDIAEQKSEPMEVDEKKPEVKVEVKEEEESSSNGTASQ 1073 >gi|14141161 heterogeneous nuclear ribonucleoprotein U isoform b [Homo sapiens] Length = 806 Score = 42.4 bits (98), Expect = 0.001 Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 32/163 (19%) Query: 555 QVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQ--QNTGFPRSNQPYYNSRGVSR 612 ++ ELQ+E+ Q ++ Y ++ PP+ QNTG +SN+ +R Sbjct: 632 EITYVELQKEEAQKLLEQYKEESKKA--------LPPEKKQNTGSKKSNKNKSGKNQFNR 683 Query: 613 GGSRGARGLMN----GYRGPANGFRGGYD--GYRP----SFSNTPNSGYTQSQ---FSAP 659 GG RG N +RG A G RGGY+ G P + GY + F Sbjct: 684 GGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPRAPVFPGR 743 Query: 660 RDYS---GYQRDG------YQQNFKRGSGQSGPRGAPRGNILW 693 YS Y R G Y QNF+ G + +G W Sbjct: 744 GSYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQW 786 >gi|74136883 heterogeneous nuclear ribonucleoprotein U isoform a [Homo sapiens] Length = 825 Score = 42.4 bits (98), Expect = 0.001 Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 32/163 (19%) Query: 555 QVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQ--QNTGFPRSNQPYYNSRGVSR 612 ++ ELQ+E+ Q ++ Y ++ PP+ QNTG +SN+ +R Sbjct: 651 EITYVELQKEEAQKLLEQYKEESKKA--------LPPEKKQNTGSKKSNKNKSGKNQFNR 702 Query: 613 GGSRGARGLMN----GYRGPANGFRGGYD--GYRP----SFSNTPNSGYTQSQ---FSAP 659 GG RG N +RG A G RGGY+ G P + GY + F Sbjct: 703 GGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPRAPVFPGR 762 Query: 660 RDYS---GYQRDG------YQQNFKRGSGQSGPRGAPRGNILW 693 YS Y R G Y QNF+ G + +G W Sbjct: 763 GSYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQW 805 >gi|148277037 AP2 associated kinase 1 [Homo sapiens] Length = 961 Score = 42.4 bits (98), Expect = 0.001 Identities = 77/354 (21%), Positives = 118/354 (33%), Gaps = 39/354 (11%) Query: 328 QQQPQAASPSVPEPHSLTPVAQADPLVRRQ---RVQDLMAQMQGPYNFIQDSMLDFENQT 384 Q +PQA PS P P + QA P ++ + Q L AQ Q Q L + Q Sbjct: 417 QPKPQAP-PSQPLPQTQAKQPQAPPTPQQTPSTQAQGLPAQAQATPQHQQQLFLKQQQQQ 475 Query: 385 LDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQPNQVPVQPEATQVPLVSSTSEGYTA 444 P QP Q + + QP Q P+VS Sbjct: 476 QQPPPAQQQPAGTFYQQQQAQT--------QQFQAVHPATQQPAIAQFPVVSQGGSQQQL 527 Query: 445 SQPLYQPSHATEQRPQKEPIDQIQATISLNTDQTTASS--SLPAASQPQVFQAGTSKPLH 502 Q YQ +Q+ Q++ + L T Q ++ A QPQ A +P Sbjct: 528 MQNFYQQQQQQQQQQQQQQLATALHQQQLMTQQAALQQKPTMAAGQQPQPQPAAAPQPAP 587 Query: 503 SSGINVNAAPFQSMQTVFNMNAP---------VPPVNEPETLKQQNQ-------YQASYN 546 + + AP + V P + P + P+T + ++ + A + Sbjct: 588 AQEPAIQ-APVRQQPKVQTTPPPAVQGQKVGSLTPPSSPKTQRAGHRRILSDVTHSAVFG 646 Query: 547 --QSFSSQPHQVEQTELQQEQLQTVVGTYHGSPDQSHQVTGNHQQPPQQNTGFPRSNQPY 604 S S+Q Q E + ++ T GSP S Q N P + +T P + + Sbjct: 647 VPASKSTQLLQAAAAEASLNKSKSATTTPSGSPRTSQQ---NVYNPSEGSTWNPFDDDNF 703 Query: 605 YNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSA 658 A+ L G G G + P F +T + + FSA Sbjct: 704 SKLTAEELLNKDFAK-LGEGKHPEKLG--GSAESLIPGFQSTQGDAFATTSFSA 754 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.308 0.125 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,509,550 Number of Sequences: 37866 Number of extensions: 1530083 Number of successful extensions: 12955 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 638 Number of HSP's that attempted gapping in prelim test: 10881 Number of HSP's gapped (non-prelim): 2438 length of query: 694 length of database: 18,247,518 effective HSP length: 109 effective length of query: 585 effective length of database: 14,120,124 effective search space: 8260272540 effective search space used: 8260272540 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.