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Search of human proteins with 42475946
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo
sapiens]
(296 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens] 593 e-170
gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens] 576 e-164
gi|134133220 hypothetical protein LOC85002 [Homo sapiens] 545 e-155
gi|212549593 hypothetical protein LOC653333 [Homo sapiens] 527 e-150
gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo sap... 508 e-144
gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo sapiens] 151 6e-37
gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo sapiens] 100 2e-21
gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo sapiens] 95 8e-20
gi|239758137 PREDICTED: hypothetical protein [Homo sapiens] 65 9e-11
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas... 62 5e-10
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas... 62 5e-10
gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens] 52 8e-07
gi|188528686 hypothetical protein LOC151194 [Homo sapiens] 49 5e-06
gi|188528684 hypothetical protein LOC151194 [Homo sapiens] 49 5e-06
gi|13376109 hypothetical protein LOC79823 [Homo sapiens] 46 4e-05
gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens] 46 4e-05
gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens] 45 6e-05
gi|94536786 hypothetical protein LOC79091 [Homo sapiens] 40 0.002
gi|58293779 hypothetical protein LOC196541 [Homo sapiens] 40 0.003
gi|126012513 hypothetical protein LOC124512 [Homo sapiens] 38 0.012
gi|209529731 hypothetical protein LOC254013 [Homo sapiens] 35 0.079
gi|209529729 hypothetical protein LOC254013 [Homo sapiens] 35 0.079
gi|28603834 hypothetical protein LOC254013 [Homo sapiens] 35 0.079
gi|15553097 hypothetical protein MGC9084 [Homo sapiens] 33 0.23
gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens] 33 0.39
gi|239756584 PREDICTED: hypothetical protein [Homo sapiens] 32 0.87
gi|239751076 PREDICTED: hypothetical protein [Homo sapiens] 32 0.87
gi|239745563 PREDICTED: hypothetical protein [Homo sapiens] 32 0.87
gi|46255049 HMT1 hnRNP methyltransferase-like 1 [Homo sapiens] 30 3.3
gi|46255047 HMT1 hnRNP methyltransferase-like 1 [Homo sapiens] 30 3.3
>gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens]
Length = 296
Score = 593 bits (1529), Expect = e-170
Identities = 296/296 (100%), Positives = 296/296 (100%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC
Sbjct: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKKPSGGSVTLSESTAIISYGTTGLVTWDAALYLAEWAIENPA 120
VKHPPSVKYARCFLSELIKKPSGGSVTLSESTAIISYGTTGLVTWDAALYLAEWAIENPA
Sbjct: 61 VKHPPSVKYARCFLSELIKKPSGGSVTLSESTAIISYGTTGLVTWDAALYLAEWAIENPA 120
Query: 121 VFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITA 180
VFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITA
Sbjct: 121 VFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITA 180
Query: 181 KLDSPRVTVAQLDWDVATVHQLSAFQPDVVIAADVLYCPEAIMSLVGVLRRLAACREHQR 240
KLDSPRVTVAQLDWDVATVHQLSAFQPDVVIAADVLYCPEAIMSLVGVLRRLAACREHQR
Sbjct: 181 KLDSPRVTVAQLDWDVATVHQLSAFQPDVVIAADVLYCPEAIMSLVGVLRRLAACREHQR 240
Query: 241 APEVYVAFTVRNPETCQLFTTELGRAGIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 296
APEVYVAFTVRNPETCQLFTTELGRAGIRWEVEPRHEQKLFPYEEHLEMAMLNLTL
Sbjct: 241 APEVYVAFTVRNPETCQLFTTELGRAGIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 296
>gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens]
Length = 330
Score = 576 bits (1484), Expect = e-164
Identities = 296/330 (89%), Positives = 296/330 (89%), Gaps = 34/330 (10%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC
Sbjct: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKK----------------------------------PSGGSV 86
VKHPPSVKYARCFLSELIKK PSGGSV
Sbjct: 61 VKHPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHRSYLLPSGGSV 120
Query: 87 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 146
TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 180
Query: 147 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 206
PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ
Sbjct: 181 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 240
Query: 207 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 266
PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA
Sbjct: 241 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 300
Query: 267 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 296
GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL
Sbjct: 301 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 330
>gi|134133220 hypothetical protein LOC85002 [Homo sapiens]
Length = 296
Score = 545 bits (1403), Expect = e-155
Identities = 273/296 (92%), Positives = 280/296 (94%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAGTELLLQ FERRFLA RTLRSFPWQSLEAKLRDSSDSELLRDIL KTV+HPVC
Sbjct: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKKPSGGSVTLSESTAIISYGTTGLVTWDAALYLAEWAIENPA 120
VKHPPSVKYA CFLSELIKK SGGSVTLS+STAIIS+GTTGLVTWDAALYLAEWAIENPA
Sbjct: 61 VKHPPSVKYAWCFLSELIKKSSGGSVTLSKSTAIISHGTTGLVTWDAALYLAEWAIENPA 120
Query: 121 VFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITA 180
F NRTVLELGSGAGLTGLAICKMCRPRAYIFSD HSRVLEQLRGNVLLNGLSLEADIT
Sbjct: 121 AFINRTVLELGSGAGLTGLAICKMCRPRAYIFSDPHSRVLEQLRGNVLLNGLSLEADITG 180
Query: 181 KLDSPRVTVAQLDWDVATVHQLSAFQPDVVIAADVLYCPEAIMSLVGVLRRLAACREHQR 240
LDSPRVTVAQLDWDVA VHQLSAFQPDVVIAADVLYCPEAI+SLVGVL+RLAACREH+R
Sbjct: 181 NLDSPRVTVAQLDWDVAMVHQLSAFQPDVVIAADVLYCPEAIVSLVGVLQRLAACREHKR 240
Query: 241 APEVYVAFTVRNPETCQLFTTELGRAGIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 296
APEVYVAFTVRNPETCQLFTTELGR GIRWE E H+QKLFPY EHLEMAMLNLTL
Sbjct: 241 APEVYVAFTVRNPETCQLFTTELGRDGIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 296
>gi|212549593 hypothetical protein LOC653333 [Homo sapiens]
Length = 330
Score = 527 bits (1357), Expect = e-150
Identities = 272/330 (82%), Positives = 280/330 (84%), Gaps = 34/330 (10%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAGTELLLQ FERRFLA RTLRSFPWQSLEAKLRDSSDSELLRDIL KTV+HPVC
Sbjct: 1 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKK----------------------------------PSGGSV 86
VKHPPSVKYA CFLSELIKK SGGSV
Sbjct: 61 VKHPPSVKYAWCFLSELIKKHEAVHTEPLDKLYEVLAETLMAKESTQGHRSYLLSSGGSV 120
Query: 87 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 146
TLS+STAIIS+GTTGLVTWDAALYLAEWAIENPA F NRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TLSKSTAIISHGTTGLVTWDAALYLAEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
Query: 147 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 206
PRAYIFSD HSR+LEQLRGNVLLNGLSLEADIT LDSPRVTVAQLDWDVA VHQLSAFQ
Sbjct: 181 PRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAMVHQLSAFQ 240
Query: 207 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 266
PDVVIAADVLYCPEAI+SLVGVL+RLAACREH+RAPEVYVAFTVRNPETCQLFTTELGR
Sbjct: 241 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGRD 300
Query: 267 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 296
GIRWE E H+QKLFPY EHLEMAMLNLTL
Sbjct: 301 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 330
>gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo
sapiens]
Length = 329
Score = 508 bits (1308), Expect = e-144
Identities = 265/330 (80%), Positives = 274/330 (83%), Gaps = 35/330 (10%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
M PEENAGT+LLLQSFE RFL ARTLRSFPWQSLEAKLRDSSDSELLRDIL KTV+HPVC
Sbjct: 1 MTPEENAGTKLLLQSFESRFLVARTLRSFPWQSLEAKLRDSSDSELLRDILQKTVRHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKK----------------------------------PSGGSV 86
VK PPSVKYARCFLSELIKK P GGSV
Sbjct: 61 VKPPPSVKYARCFLSELIKKHEAVHTEPLDELYEALAETLMAKESTQGHQSYLLPWGGSV 120
Query: 87 TLSESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCR 146
T SESTAIIS+GTTG VTWD ALYL EWAIENPA F NRTVLELGSGAGLTGLAICKMCR
Sbjct: 121 TXSESTAIISHGTTGRVTWDTALYLVEWAIENPAAFINRTVLELGSGAGLTGLAICKMCR 180
Query: 147 PRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQ 206
PRAYIFSD HSRVLEQL+GNVLLNGLSLEADIT SPRVTVAQLDWDVATVHQLSAF
Sbjct: 181 PRAYIFSDPHSRVLEQLQGNVLLNGLSLEADITGNX-SPRVTVAQLDWDVATVHQLSAFH 239
Query: 207 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 266
PDVVIAADVLYCPEAI+SLVGVL+RLAACREH+RAPEVYVAFTVRNPETCQLFTTELG+A
Sbjct: 240 PDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQA 299
Query: 267 GIRWEVEPRHEQKLFPYEEHLEMAMLNLTL 296
GIRWE E H+QKLFPY EHLEMAMLNLTL
Sbjct: 300 GIRWEAEAHHDQKLFPYGEHLEMAMLNLTL 329
>gi|153251811 hypothetical protein LOC55199 isoform 3 [Homo
sapiens]
Length = 158
Score = 151 bits (382), Expect = 6e-37
Identities = 75/80 (93%), Positives = 77/80 (96%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAG+ELLLQSF+RRFLAAR LRSF WQSLEAKLRDSSDSELLRDIL KTVKHPVC
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKTVKHPVC 60
Query: 61 VKHPPSVKYARCFLSELIKK 80
VKHPPSVKYARCFLSELIKK
Sbjct: 61 VKHPPSVKYARCFLSELIKK 80
>gi|24211015 hypothetical protein LOC55199 isoform 2 [Homo
sapiens]
Length = 131
Score = 100 bits (248), Expect = 2e-21
Identities = 52/70 (74%), Positives = 58/70 (82%), Gaps = 4/70 (5%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHKTVKHPVC 60
MAPEENAG+ELLLQSF+RRFLAAR LRSF WQSLEAKLRDSSDSELLRDIL KT C
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQKT----CC 56
Query: 61 VKHPPSVKYA 70
+ PS +++
Sbjct: 57 IAQKPSCRWS 66
>gi|153251796 hypothetical protein LOC55199 isoform 1 [Homo
sapiens]
Length = 165
Score = 94.7 bits (234), Expect = 8e-20
Identities = 48/53 (90%), Positives = 50/53 (94%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQSLEAKLRDSSDSELLRDILHK 53
MAPEENAG+ELLLQSF+RRFLAAR LRSF WQSLEAKLRDSSDSELLRDIL K
Sbjct: 1 MAPEENAGSELLLQSFKRRFLAARALRSFRWQSLEAKLRDSSDSELLRDILQK 53
>gi|239758137 PREDICTED: hypothetical protein [Homo sapiens]
Length = 89
Score = 64.7 bits (156), Expect = 9e-11
Identities = 30/32 (93%), Positives = 30/32 (93%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQ 32
MAPEENAGTELLLQ FERRFLA RTLRSFPWQ
Sbjct: 25 MAPEENAGTELLLQGFERRFLAVRTLRSFPWQ 56
>gi|169217659 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 62.4 bits (150), Expect = 5e-10
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQ 32
MAPEENAGTEL LQ FERRFLAAR+LRSFPWQ
Sbjct: 416 MAPEENAGTELWLQGFERRFLAARSLRSFPWQ 447
>gi|169167316 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 62.4 bits (150), Expect = 5e-10
Identities = 29/32 (90%), Positives = 30/32 (93%)
Query: 1 MAPEENAGTELLLQSFERRFLAARTLRSFPWQ 32
MAPEENAGTEL LQ FERRFLAAR+LRSFPWQ
Sbjct: 416 MAPEENAGTELWLQGFERRFLAARSLRSFPWQ 447
>gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens]
Length = 226
Score = 51.6 bits (122), Expect = 8e-07
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
Query: 105 WDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLR 164
WDAAL L + F + V+ELG+G G+ G I + +D LEQ++
Sbjct: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVG--ILAALQGGDVTITDL-PLALEQIQ 113
Query: 165 GNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQPDVVIAADVLYCPEAIMS 224
GNV +A++ A + V L W + H + D+V+ AD++Y
Sbjct: 114 GNV-------QANVPA---GGQAQVRALSWGID--HHVFPANYDLVLGADIVYLEPTFPL 161
Query: 225 LVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRAGIRWEVEPRHEQK 279
L+G L+ L CR H +Y+A +R + F L + E+ R E +
Sbjct: 162 LLGTLQHL--CRPH---GTIYLASKMRKEHGTESFFQHLLPQHFQLELAQRDEDE 211
>gi|188528686 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 48.9 bits (115), Expect = 5e-06
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 20/139 (14%)
Query: 103 VTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQ 162
V WDAA+ L+ + R+ +ELG+G GL G+ + A++ LE
Sbjct: 45 VVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALL---GAHVTITDRKVALEF 101
Query: 163 LRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQP---DVVIAADVLYCP 219
L+ NV N L I K V +L W L +F P D+++ AD++Y
Sbjct: 102 LKSNVQAN---LPPHIQTK-----TVVKELTWG----QNLGSFSPGEFDLILGADIIYLE 149
Query: 220 EAIMSLVGVLRRLAACREH 238
E L+ L L C H
Sbjct: 150 ETFTDLLQTLEHL--CSNH 166
>gi|188528684 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 48.9 bits (115), Expect = 5e-06
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 20/139 (14%)
Query: 103 VTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQ 162
V WDAA+ L+ + R+ +ELG+G GL G+ + A++ LE
Sbjct: 45 VVWDAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALL---GAHVTITDRKVALEF 101
Query: 163 LRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQP---DVVIAADVLYCP 219
L+ NV N L I K V +L W L +F P D+++ AD++Y
Sbjct: 102 LKSNVQAN---LPPHIQTK-----TVVKELTWG----QNLGSFSPGEFDLILGADIIYLE 149
Query: 220 EAIMSLVGVLRRLAACREH 238
E L+ L L C H
Sbjct: 150 ETFTDLLQTLEHL--CSNH 166
>gi|13376109 hypothetical protein LOC79823 [Homo sapiens]
Length = 323
Score = 45.8 bits (107), Expect = 4e-05
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 23/224 (10%)
Query: 67 VKYARCFLSELIKKPSGGSVTLSESTAIISYGTTGLVT-WDAALYLAEWAIENPAVFTNR 125
V+Y F E S +L+ + S+ TG V W + LA + +++ +F
Sbjct: 89 VQYTSIFCPEYSISLRHNSGSLNVEDVLTSFDNTGNVCIWPSEEVLAYYCLKHNNIFRAL 148
Query: 126 TVLELGSGAG-LTGLAICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDS 184
V ELG G L GL + + + +D + + + ++ + N + +
Sbjct: 149 AVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIRNVQDIITRNQKA------GVFKT 202
Query: 185 PRVTVAQLDWDVAT-VHQLSAFQPDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPE 243
+++ L WD T V QL D+V+ AD L+ + SLV ++RL R
Sbjct: 203 QKISSCVLRWDNETDVSQLEGHF-DIVMCADCLFLDQYRASLVDAIKRLLQPRGKA---- 257
Query: 244 VYVAFTVRNPETCQLFTTELGRAGIRWEVEPRHEQKLFPYEEHL 287
+ F R T F +AG + RHE Y+EH+
Sbjct: 258 --MVFAPRRGNTLNQFCNLAEKAGFCIQ---RHEN----YDEHI 292
>gi|98986333 hypothetical protein LOC79609 isoform b [Homo sapiens]
Length = 194
Score = 45.8 bits (107), Expect = 4e-05
Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 45/196 (22%)
Query: 96 SYGTTGLVTWDAALYLAEWAIENPA-------VFTNRTVLELGSGAGLTGLAICKMCRPR 148
S G G V WDAA+ L+++ +E P + R+VLELGSG G GL
Sbjct: 34 SSGGVGCVVWDAAIVLSKY-LETPEFSGDGAHALSRRSVLELGSGTGAVGLM-------A 85
Query: 149 AYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAF--Q 206
A + +D LE+L+ + L + ++ L + V L W ++ F
Sbjct: 86 ATLGADVVVTDLEELQ-----DLLKMNINMNKHLVTGSVQAKVLKWG----EEIEGFPSP 136
Query: 207 PDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTTELGRA 266
PD ++ AD +Y E++ L+ L+ ++ ETC + E
Sbjct: 137 PDFILMADCIYYEESLEPLLKTLKDISGF------------------ETCIICCYEQRTM 178
Query: 267 GIRWEVEPRHEQKLFP 282
G E+E ++ +K FP
Sbjct: 179 GKNPEIEKKYFEK-FP 193
>gi|98986323 hypothetical protein LOC79609 isoform a [Homo sapiens]
Length = 229
Score = 45.4 bits (106), Expect = 6e-05
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 96 SYGTTGLVTWDAALYLAEWAIENPA-------VFTNRTVLELGSGAGLTGLAICKMCRPR 148
S G G V WDAA+ L+++ +E P + R+VLELGSG G GL
Sbjct: 34 SSGGVGCVVWDAAIVLSKY-LETPEFSGDGAHALSRRSVLELGSGTGAVGLM-------A 85
Query: 149 AYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAF--Q 206
A + +D LE+L+ + L + ++ L + V L W ++ F
Sbjct: 86 ATLGADVVVTDLEELQ-----DLLKMNINMNKHLVTGSVQAKVLKWG----EEIEGFPSP 136
Query: 207 PDVVIAADVLYCPEAIMSLVGVLRRLA 233
PD ++ AD +Y E++ L+ L+ ++
Sbjct: 137 PDFILMADCIYYEESLEPLLKTLKDIS 163
>gi|94536786 hypothetical protein LOC79091 [Homo sapiens]
Length = 404
Score = 40.0 bits (92), Expect = 0.002
Identities = 54/214 (25%), Positives = 85/214 (39%), Gaps = 38/214 (17%)
Query: 90 ESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPRA 149
E T G W AL LA++ + +F T LELG+G GL + M R
Sbjct: 172 EHTMATPLEDVGKQVWRGALLLADYILFRQDLFRGCTALELGAGTGLASIIAATMA--RT 229
Query: 150 YIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDW---DVAT-------- 198
+D + +L + N+ LN A V V +LDW D+ T
Sbjct: 230 VYCTDVGADLLSMCQRNIALN------SHLAATGGGIVRVKELDWLKDDLCTDPKVPFSW 283
Query: 199 -VHQLSAF--QPDVVIAADVLYCPEAIMSLVGVLRRLA-----ACREHQRAPEVYVAFTV 250
++S ++ AA+V Y + ++ L RLA AC + E + FT+
Sbjct: 284 SQEEISDLYDHTTILFAAEVFYDDDLTDAVFKTLSRLAHRLKNACTA-ILSVEKRLNFTL 342
Query: 251 RNPE-TCQLF---------TTELGRAGIRWEVEP 274
R+ + TC+ + +L +R+ VEP
Sbjct: 343 RHLDVTCEAYDHFRSCLHALEQLADGKLRFVVEP 376
>gi|58293779 hypothetical protein LOC196541 [Homo sapiens]
Length = 264
Score = 39.7 bits (91), Expect = 0.003
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 82 SGGSVTLSESTAIISYGTTGLVTWDAALYLAEWAIENPAV--FTNRTVLELGSGAGLTGL 139
+G + + ES I SYG V W A+ L ++ E+ F + +LE+G+G GL +
Sbjct: 74 AGKEIVIQES--IESYGA---VVWPGAMALCQYLEEHAEELNFQDAKILEIGAGPGLVSI 128
Query: 140 AICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDW--DVA 197
+ A + + VL L+ N+L N L A + V +L W D+
Sbjct: 129 VASIL---GAQVTATDLPDVLGNLQYNLLKNTLQCTAHLPE--------VKELVWGEDLD 177
Query: 198 TVHQLSAFQPDVVIAADVLY 217
SAF D V+A+DV+Y
Sbjct: 178 KNFPKSAFYYDYVLASDVVY 197
>gi|126012513 hypothetical protein LOC124512 [Homo sapiens]
Length = 190
Score = 37.7 bits (86), Expect = 0.012
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 16/130 (12%)
Query: 102 LVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHS--RV 159
+ W A+ LA++ + + +LE+G+G L G+ K C I SD
Sbjct: 1 MYVWPCAVVLAQYLWFHRRSLPGKAILEIGAGVSLPGILAAK-CGAEV-ILSDSSELPHC 58
Query: 160 LEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVATVHQLSAFQPDVVIAADVLYCP 219
LE R + +N L P + V L W + L+ D+++A+DV + P
Sbjct: 59 LEVCRQSCQMNNL------------PHLQVVGLTWGHISWDLLALPPQDIILASDVFFEP 106
Query: 220 EAIMSLVGVL 229
E ++ +
Sbjct: 107 EDFEDILATI 116
>gi|209529731 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 35.0 bits (79), Expect = 0.079
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 103 VTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLA 140
+ W L+ + ++NP V ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|209529729 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 35.0 bits (79), Expect = 0.079
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 103 VTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLA 140
+ W L+ + ++NP V ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|28603834 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 35.0 bits (79), Expect = 0.079
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 103 VTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLA 140
+ W L+ + ++NP V ++VL+LGSG G T +A
Sbjct: 95 IYWPGGQALSRYLLDNPDVVRGKSVLDLGSGCGATAIA 132
>gi|15553097 hypothetical protein MGC9084 [Homo sapiens]
Length = 372
Score = 33.5 bits (75), Expect = 0.23
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 89 SESTAIISYGTTGLVTWDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGLAICKMCRPR 148
S S I GL W+ L + + F + VL+LG G+GL G+ K
Sbjct: 153 SHSDLITGVYEGGLKIWECTFDLLAYFTKAKVKFAGKKVLDLGCGSGLLGITAFKGGSKE 212
Query: 149 AYIFSDCHSRVLEQLR-GNVLLN 170
+ F D +S V++++ NV+ N
Sbjct: 213 IH-FQDYNSMVIDEVTLPNVVAN 234
>gi|45827723 hypothetical protein LOC25895 isoform b [Homo sapiens]
Length = 149
Score = 32.7 bits (73), Expect = 0.39
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 105 WDAALYLAEWAIENPAVFTNRTVLELGSGAGLTGL 139
WDAAL L + F + V+ELG+G G+ G+
Sbjct: 57 WDAALSLCNYFESQNVDFRGKKVIELGAGTGIVGI 91
>gi|239756584 PREDICTED: hypothetical protein [Homo sapiens]
Length = 349
Score = 31.6 bits (70), Expect = 0.87
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 17/69 (24%)
Query: 120 AVFTNRTVLELGSGAG---LTGLAICK--------------MCRPRAYIFSDCHSRVLEQ 162
A+ T+R++ LG+G G L GLA + +PRA + +DC + EQ
Sbjct: 7 ALLTSRSISALGTGRGRDALPGLASSHTALPNLASPAIQPTVSQPRAPLTTDCCRALWEQ 66
Query: 163 LRGNVLLNG 171
RG+ LL G
Sbjct: 67 RRGSFLLEG 75
>gi|239751076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 349
Score = 31.6 bits (70), Expect = 0.87
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 17/69 (24%)
Query: 120 AVFTNRTVLELGSGAG---LTGLAICK--------------MCRPRAYIFSDCHSRVLEQ 162
A+ T+R++ LG+G G L GLA + +PRA + +DC + EQ
Sbjct: 7 ALLTSRSISALGTGRGRDALPGLASSHTALPNLASPAIQPTVSQPRAPLTTDCCRALWEQ 66
Query: 163 LRGNVLLNG 171
RG+ LL G
Sbjct: 67 RRGSFLLEG 75
>gi|239745563 PREDICTED: hypothetical protein [Homo sapiens]
Length = 349
Score = 31.6 bits (70), Expect = 0.87
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 17/69 (24%)
Query: 120 AVFTNRTVLELGSGAG---LTGLAICK--------------MCRPRAYIFSDCHSRVLEQ 162
A+ T+R++ LG+G G L GLA + +PRA + +DC + EQ
Sbjct: 7 ALLTSRSISALGTGRGRDALPGLASSHTALPNLASPAIQPTVSQPRAPLTTDCCRALWEQ 66
Query: 163 LRGNVLLNG 171
RG+ LL G
Sbjct: 67 RRGSFLLEG 75
>gi|46255049 HMT1 hnRNP methyltransferase-like 1 [Homo sapiens]
Length = 433
Score = 29.6 bits (65), Expect = 3.3
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 116 IENPAVFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLS 173
++N T++ +L++G G G+ L RPRA +++ S + + VL NG +
Sbjct: 130 LQNKESLTDKVILDVGCGTGIISLFCAHYARPRA-VYAVEASEMAQHTGQLVLQNGFA 186
>gi|46255047 HMT1 hnRNP methyltransferase-like 1 [Homo sapiens]
Length = 433
Score = 29.6 bits (65), Expect = 3.3
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 116 IENPAVFTNRTVLELGSGAGLTGLAICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLS 173
++N T++ +L++G G G+ L RPRA +++ S + + VL NG +
Sbjct: 130 LQNKESLTDKVILDVGCGTGIISLFCAHYARPRA-VYAVEASEMAQHTGQLVLQNGFA 186
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,969,862
Number of Sequences: 37866
Number of extensions: 442419
Number of successful extensions: 945
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 913
Number of HSP's gapped (non-prelim): 40
length of query: 296
length of database: 18,247,518
effective HSP length: 102
effective length of query: 194
effective length of database: 14,385,186
effective search space: 2790726084
effective search space used: 2790726084
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.