Search of human proteins with 41872368

Search of human proteins with 41872368

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41872368 periphilin 1 isoform 2 [Homo sapiens]
         (374 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|41872368 periphilin 1 isoform 2 [Homo sapiens]                     766   0.0  
gi|41872344 periphilin 1 isoform 3 [Homo sapiens]                     752   0.0  
gi|219842247 periphilin 1 isoform 7 [Homo sapiens]                    700   0.0  
gi|48255929 periphilin 1 isoform 1 [Homo sapiens]                     697   0.0  
gi|41872349 periphilin 1 isoform 4 [Homo sapiens]                     595   e-170
gi|219842250 periphilin 1 isoform 8 [Homo sapiens]                    531   e-151
gi|219842244 periphilin 1 isoform 6 [Homo sapiens]                    528   e-150
gi|41872339 periphilin 1 isoform 5 [Homo sapiens]                     466   e-131
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]          52   1e-06
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]     49   7e-06
gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2...    47   3e-05
gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1...    47   3e-05
gi|50083281 KIAA1853 protein [Homo sapiens]                            47   3e-05
gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]    47   4e-05
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]     45   8e-05
gi|42560244 peptidylprolyl isomerase G [Homo sapiens]                  45   1e-04
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi...    45   1e-04
gi|229577273 BUD13 homolog isoform 2 [Homo sapiens]                    44   2e-04
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]     44   2e-04
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]     44   2e-04
gi|17999539 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Homo sapi...    44   2e-04
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]     44   2e-04
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]       42   7e-04
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s...    42   7e-04
gi|221139764 PHD and ring finger domains 1 [Homo sapiens]              41   0.002
gi|62526045 zinc finger protein 638 [Homo sapiens]                     41   0.002
gi|21626468 zinc finger protein 638 [Homo sapiens]                     41   0.002
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s...    41   0.002
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     41   0.002
gi|16905517 FUS interacting protein (serine-arginine rich) 1 iso...    41   0.002

>gi|41872368 periphilin 1 isoform 2 [Homo sapiens]
          Length = 374

 Score =  766 bits (1979), Expect = 0.0
 Identities = 374/374 (100%), Positives = 374/374 (100%)

Query: 1   MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYY 60
           MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYY
Sbjct: 1   MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYY 60

Query: 61  SHVDYRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYS 120
           SHVDYRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYS
Sbjct: 61  SHVDYRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYS 120

Query: 121 SHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSV 180
           SHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSV
Sbjct: 121 SHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSV 180

Query: 181 RPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 240
           RPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA
Sbjct: 181 RPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 240

Query: 241 SKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKA 300
           SKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKA
Sbjct: 241 SKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKA 300

Query: 301 IASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFI 360
           IASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFI
Sbjct: 301 IASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFI 360

Query: 361 AEYDTSTQDFGEPF 374
           AEYDTSTQDFGEPF
Sbjct: 361 AEYDTSTQDFGEPF 374


>gi|41872344 periphilin 1 isoform 3 [Homo sapiens]
          Length = 367

 Score =  752 bits (1942), Expect = 0.0
 Identities = 367/367 (100%), Positives = 367/367 (100%)

Query: 8   MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD 67
           MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD
Sbjct: 1   MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD 60

Query: 68  YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER 127
           YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER
Sbjct: 61  YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER 120

Query: 128 SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYK 187
           SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYK
Sbjct: 121 SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYK 180

Query: 188 RQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK 247
           RQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK
Sbjct: 181 RQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK 240

Query: 248 LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE 307
           LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE
Sbjct: 241 LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE 300

Query: 308 IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTST 367
           IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTST
Sbjct: 301 IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTST 360

Query: 368 QDFGEPF 374
           QDFGEPF
Sbjct: 361 QDFGEPF 367


>gi|219842247 periphilin 1 isoform 7 [Homo sapiens]
          Length = 348

 Score =  700 bits (1806), Expect = 0.0
 Identities = 347/367 (94%), Positives = 348/367 (94%), Gaps = 19/367 (5%)

Query: 8   MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD 67
           MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD
Sbjct: 1   MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD 60

Query: 68  YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER 127
           YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER
Sbjct: 61  YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER 120

Query: 128 SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYK 187
           SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQH           
Sbjct: 121 SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQH----------- 169

Query: 188 RQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK 247
                   R+KERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK
Sbjct: 170 --------RNKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK 221

Query: 248 LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE 307
           LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE
Sbjct: 222 LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE 281

Query: 308 IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTST 367
           IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTST
Sbjct: 282 IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTST 341

Query: 368 QDFGEPF 374
           QDFGEPF
Sbjct: 342 QDFGEPF 348


>gi|48255929 periphilin 1 isoform 1 [Homo sapiens]
          Length = 458

 Score =  697 bits (1799), Expect = 0.0
 Identities = 341/341 (100%), Positives = 341/341 (100%)

Query: 8   MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD 67
           MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD
Sbjct: 1   MWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRD 60

Query: 68  YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER 127
           YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER
Sbjct: 61  YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER 120

Query: 128 SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYK 187
           SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYK
Sbjct: 121 SPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYK 180

Query: 188 RQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK 247
           RQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK
Sbjct: 181 RQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEK 240

Query: 248 LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE 307
           LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE
Sbjct: 241 LEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKE 300

Query: 308 IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI 348
           IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI
Sbjct: 301 IEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI 341


>gi|41872349 periphilin 1 isoform 4 [Homo sapiens]
          Length = 319

 Score =  595 bits (1533), Expect = e-170
 Identities = 311/376 (82%), Positives = 311/376 (82%), Gaps = 59/376 (15%)

Query: 1   MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYY 60
           MAYRRDEMWSEGRYEY     ER P                                   
Sbjct: 1   MAYRRDEMWSEGRYEY-----ERIP----------------------------------- 20

Query: 61  SHVDYRDYDEGRSFSHDRRSGPP--HRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSF 118
                            R   PP  H  DESGYRWTRDDHSASRQPEYRDMRDGFRRKSF
Sbjct: 21  -----------------RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSF 63

Query: 119 YSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRK 178
           YSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRK
Sbjct: 64  YSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRK 123

Query: 179 SVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAE 238
           SVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAE
Sbjct: 124 SVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAE 183

Query: 239 AASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRS 298
           AASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRS
Sbjct: 184 AASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRS 243

Query: 299 KAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKH 358
           KAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKH
Sbjct: 244 KAIASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKH 303

Query: 359 FIAEYDTSTQDFGEPF 374
           FIAEYDTSTQDFGEPF
Sbjct: 304 FIAEYDTSTQDFGEPF 319


>gi|219842250 periphilin 1 isoform 8 [Homo sapiens]
          Length = 293

 Score =  531 bits (1368), Expect = e-151
 Identities = 272/299 (90%), Positives = 273/299 (91%), Gaps = 21/299 (7%)

Query: 78  RRSGPP--HRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 135
           R   PP  H  DESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT
Sbjct: 14  RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 73

Query: 136 FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPE 195
           FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR                  
Sbjct: 74  FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR------------------ 115

Query: 196 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN 255
            +KERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN
Sbjct: 116 -NKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN 174

Query: 256 LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD 315
           LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD
Sbjct: 175 LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD 234

Query: 316 CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF 374
           CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF
Sbjct: 235 CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIGERCVEELKHFIAEYDTSTQDFGEPF 293


>gi|219842244 periphilin 1 isoform 6 [Homo sapiens]
          Length = 434

 Score =  528 bits (1361), Expect = e-150
 Identities = 266/273 (97%), Positives = 266/273 (97%), Gaps = 2/273 (0%)

Query: 78  RRSGPP--HRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 135
           R   PP  H  DESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT
Sbjct: 14  RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNT 73

Query: 136 FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPE 195
           FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPE
Sbjct: 74  FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPE 133

Query: 196 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN 255
           RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN
Sbjct: 134 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESN 193

Query: 256 LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD 315
           LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD
Sbjct: 194 LPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRSKAIASKTKEIEQVYRQD 253

Query: 316 CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI 348
           CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI
Sbjct: 254 CETFGMVVKMLIEKDPSLEKSIQFALRQNLHEI 286


>gi|41872339 periphilin 1 isoform 5 [Homo sapiens]
          Length = 258

 Score =  466 bits (1200), Expect = e-131
 Identities = 248/313 (79%), Positives = 248/313 (79%), Gaps = 59/313 (18%)

Query: 1   MAYRRDEMWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYY 60
           MAYRRDEMWSEGRYEY     ER P                                   
Sbjct: 1   MAYRRDEMWSEGRYEY-----ERIP----------------------------------- 20

Query: 61  SHVDYRDYDEGRSFSHDRRSGPP--HRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSF 118
                            R   PP  H  DESGYRWTRDDHSASRQPEYRDMRDGFRRKSF
Sbjct: 21  -----------------RERAPPRSHPSDESGYRWTRDDHSASRQPEYRDMRDGFRRKSF 63

Query: 119 YSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRK 178
           YSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRK
Sbjct: 64  YSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRK 123

Query: 179 SVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAE 238
           SVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAE
Sbjct: 124 SVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAE 183

Query: 239 AASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRS 298
           AASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRS
Sbjct: 184 AASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRS 243

Query: 299 KAIASKTKEIEQV 311
           KAIASKTKEIEQV
Sbjct: 244 KAIASKTKEIEQV 256


>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
          Length = 715

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 64/272 (23%), Positives = 99/272 (36%), Gaps = 39/272 (14%)

Query: 49  DRPGEGSYNRYYSHVDYRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRD 108
           DR    S N+   H   R  ++ R  S  R         + G      DH  SR P  ++
Sbjct: 448 DRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPS-KE 506

Query: 109 MRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKS 168
            +    R S     + R RSP K        SP   +D   SRS S              
Sbjct: 507 RQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPS-------------- 552

Query: 169 YSFHQSQHRKSVRPGASYKRQNEGNPERDKER-----PVQSLKTSRDTSPSSGSAVSSSK 223
               + +HR+S  P     R+   +P +++ER       +    SR  SP+  S  S  +
Sbjct: 553 ---EEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPR 609

Query: 224 VLDKP-----SRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEP 278
              K      SR   KE   + S+ ++++ + S +S +P   +++   T      Q   P
Sbjct: 610 ASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPS-QSTVPRSPDWKRSPTRTSSLSQNRTP 668

Query: 279 ESNTTHGIELF---------EDSQL-TTRSKA 300
              ++H    F         +DSQ   T SKA
Sbjct: 669 SKTSSHSPSTFPSGGQTLSQDDSQADATTSKA 700



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 58/215 (26%), Positives = 86/215 (40%), Gaps = 22/215 (10%)

Query: 61  SHVDYRDYDEGRSFSHDRRSGPP--HRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSF 118
           SH   R+  + RS SH R S     HRG  S     R +   S+       RD  R +S 
Sbjct: 352 SHNWSRNPSKERSHSHSRSSSKERDHRGSSS----PRKESGRSQSGSPNKQRDHSRSRSP 407

Query: 119 YSSH-YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR 177
             +   +R RSPYK  +     SP   +D   SRS      RS S   +K+       H 
Sbjct: 408 NKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKA-----RDHS 462

Query: 178 KSVRPGASYKRQNEGNPERDKER-----PVQSLKTSRDTSPSS----GSAVSSSKVLD-K 227
           +S  P  +  R    +P ++++      P +     R  SPS       + SSSK  D +
Sbjct: 463 RSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHR 522

Query: 228 PSRLTEKELAEAASKWAAEKLEKSDESNLPEISEY 262
            SR   KE     S+   ++ ++S   +  E  E+
Sbjct: 523 RSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREH 557



 Score = 34.3 bits (77), Expect = 0.19
 Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 36/219 (16%)

Query: 55  SYNRYYSHVDYRDYDEGRSFSHDRRSGPPHRGDES--GYRWTRDDHSASRQPEYRDMRDG 112
           SYN+  +    + + + RS     RSG   R       + W R+ HS +R    + +   
Sbjct: 268 SYNQASTRSRPQSHSQSRS-PRRSRSGSQKRTHSRVRSHSWKRN-HSRARSRTRKGILSQ 325

Query: 113 FRRKSFYSSHYA-----RERSPYKRDNTFFRESPVGRKDSPHSRSGS------------- 154
             R S   SH       + R+P +  +  +  +P   +   HSRS S             
Sbjct: 326 MGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRK 385

Query: 155 -SVSSRSYSPERSKSYSFHQSQH--RKSVRPGASYK-----RQNEGNPERDKER---PVQ 203
            S  S+S SP + + +S  +S +  R   R  + YK     R    N  RD  R   P +
Sbjct: 386 ESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYK 445

Query: 204 SLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 242
           +   SR  SP+     S S+    P++  ++  + + SK
Sbjct: 446 ARDRSRSRSPNKARDHSRSR---SPNKARDRSRSRSPSK 481



 Score = 30.4 bits (67), Expect = 2.7
 Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 7/172 (4%)

Query: 101 SRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRS 160
           SR+  Y       R KS Y+    R R      +   R S  G +   HSR  S    R+
Sbjct: 252 SREKSYSPTEMSSRVKS-YNQASTRSRPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRN 310

Query: 161 YSPERSKSYSFHQSQ---HRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGS 217
           +S  RS++     SQ   H +S R  +  K QN+    R       S   S++ S S   
Sbjct: 311 HSRARSRTRKGILSQMGRHSQS-RSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSR 369

Query: 218 AVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAP 269
             SSSK  D     + ++ +  +   +  K      S  P  +   + S +P
Sbjct: 370 --SSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSP 419


>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
          Length = 494

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 68/233 (29%), Positives = 96/233 (41%), Gaps = 49/233 (21%)

Query: 4   RRDEMWSEGR--YEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYS 61
           RRD  +  GR  Y Y R  R++  P +     Y  +V  +  +    D      Y R   
Sbjct: 74  RRDGSYGSGRSGYGYRRSGRDKYGPPTRTE--YRLIVENLSSRCSWQDLK---DYMRQAG 128

Query: 62  HVDYRDYDEGR---------SFSHDRRSGPPHRGDESGYRWTR--DDHSASRQPEYRDMR 110
            V Y D  +GR         S+S  +R+     G E   R  R  +D   SR        
Sbjct: 129 EVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPGSR-------- 180

Query: 111 DGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYS 170
              RR+S     Y+R RS + R  +  R S   R     SRSGSS SS S S  RS+S S
Sbjct: 181 ---RRRS-----YSRSRS-HSRSRSRSRHSRKSR-----SRSGSSKSSHSKSRSRSRSGS 226

Query: 171 FHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSK 223
             +S+ R   +  +  K++   +P ++K         SR  S S+G + S SK
Sbjct: 227 RSRSKSRSRSQSRSRSKKEKSRSPSKEK---------SRSRSHSAGKSRSKSK 270



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 54/214 (25%), Positives = 82/214 (38%), Gaps = 26/214 (12%)

Query: 5   RDEMWSEGRYEYERIP-RERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHV 63
           R +  S  + E  R P +E++  RSH S G +R  +    +  + +    G   +  S  
Sbjct: 235 RSQSRSRSKKEKSRSPSKEKSRSRSH-SAGKSRSKSKDQAEEKIQNNDNVGK-PKSRSPS 292

Query: 64  DYRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHY 123
            ++   + RS S +RR     RG  S  R        S++   R  R   R K    S  
Sbjct: 293 RHKSKSKSRSRSQERRVEEEKRGSVSRGR--------SQEKSLRQSRSRSRSKGGSRS-- 342

Query: 124 ARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPG 183
            R RS  K             KD    R  S   SRS S  RSKS    +   ++  + G
Sbjct: 343 -RSRSRSKS------------KDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAG 389

Query: 184 ASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGS 217
           +S K++ E         P +S+   R+ + S  S
Sbjct: 390 SSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESS 423



 Score = 30.8 bits (68), Expect = 2.1
 Identities = 49/237 (20%), Positives = 86/237 (36%), Gaps = 18/237 (7%)

Query: 69  DEGRSFSHDRRSGPPHRGDESGYRWTRDDHSA---SRQPEYRDMRDGFRRKSFYSSHYAR 125
           ++ RS SH          D++  +   +D+     SR P     +   R +S        
Sbjct: 253 EKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEE 312

Query: 126 ERSPYKRDNT---FFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRP 182
           +R    R  +     R+S    +    SRS S   SRS S ++ K     + + R   R 
Sbjct: 313 KRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSR--SRSKSKDKRKGRKRSREESRSRSRS 370

Query: 183 GASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASK 242
            +  +R  +   +RD +      K   DT  S   +         PSR   KE   A S+
Sbjct: 371 RSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRS---------PSRSVSKEREHAKSE 421

Query: 243 WA-AEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDSQLTTRS 298
            +  E   +S+ +   + +   + S +    + P E  S +    +    S+  +RS
Sbjct: 422 SSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRS 478


>gi|157817073 Cdc2-related kinase, arginine/serine-rich isoform 2
           [Homo sapiens]
          Length = 1481

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 86/334 (25%), Positives = 130/334 (38%), Gaps = 42/334 (12%)

Query: 4   RRDEMWSEGRYEYERIPRERAPPRSHPS-DGYNRLVNIVPKK----PPLLDRPGEGSYNR 58
           R++     G  +  +  R+R  P+S+ + D   R      +K        D P   SY +
Sbjct: 185 RKERELKSGHKDRSKSHRKRETPKSYKTVDSPKRRSRSPHRKWSDSSKQDDSPSGASYGQ 244

Query: 59  YY------SHV--DYRDYDEGRSFSHDRRS-GPPHRGDESGYRWTRDDHSASRQ-----P 104
            Y      SH   +Y  Y +    +  R+S  PP++   +    TR     SR+     P
Sbjct: 245 DYDLSPSRSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSP 304

Query: 105 EYRDMRDGFRRKSFYS----SHYARERS--PYKRDNTFFRESPVGRKDSPHSRSGSSVSS 158
             R     + R   YS    S Y R RS  P+    +  R SP+  + S  SRS S   S
Sbjct: 305 YSRRRSSSYERSGSYSGRSPSPYGRRRSSSPFLSKRSLSR-SPLPSRKSMKSRSRSPAYS 363

Query: 159 RSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGN--PERDKERPVQSLKTSRDTSPSSG 216
           R  S    K  S  +S+H  S+ P       + G     + KER   +     D   S G
Sbjct: 364 RHSSSHSKKKRSSSRSRH-SSISPVRLPLNSSLGAELSRKKKERAAAAAAAKMDGKESKG 422

Query: 217 SAV-----SSSKVLDKPSRLTEKELAEAASKWAAEKLEKS-DESNLPEISEYEAGSTAPL 270
           S V      +S V  K S L  K+L  +       KLEKS  ++ L  ++          
Sbjct: 423 SPVFLPRKENSSVEAKDSGLESKKLPRSV------KLEKSAPDTELVNVTHLNTEVKNSS 476

Query: 271 FTDQPEEPESNTTHGIELFEDSQLTTRSKAIASK 304
            T + +  E++  H ++  + +Q T  SK IA K
Sbjct: 477 DTGKVKLDENSEKHLVKDLK-AQGTRDSKPIALK 509



 Score = 30.4 bits (67), Expect = 2.7
 Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 8/167 (4%)

Query: 64  DYRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHY 123
           D   + +  +F  DRR     RG +   R  +  H   R+   RD+    + +   S   
Sbjct: 79  DSDTFSDDMAFKLDRRENDERRGSDRSDRLHKHRHHQHRRS--RDLLKAKQTEKEKSQEV 136

Query: 124 ARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPG 183
           + +    K      R S   ++ +  +           S + S+S   H+ + RK     
Sbjct: 137 SSKSGSMKD-----RISGSSKRSNEETDDYGKAQVAKSSSKESRSSKLHKEKTRKERELK 191

Query: 184 ASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVS-SSKVLDKPS 229
           + +K +++ + +R+  +  +++ + +  S S     S SSK  D PS
Sbjct: 192 SGHKDRSKSHRKRETPKSYKTVDSPKRRSRSPHRKWSDSSKQDDSPS 238


>gi|157817023 Cdc2-related kinase, arginine/serine-rich isoform 1
           [Homo sapiens]
          Length = 1490

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 86/334 (25%), Positives = 130/334 (38%), Gaps = 42/334 (12%)

Query: 4   RRDEMWSEGRYEYERIPRERAPPRSHPS-DGYNRLVNIVPKK----PPLLDRPGEGSYNR 58
           R++     G  +  +  R+R  P+S+ + D   R      +K        D P   SY +
Sbjct: 185 RKERELKSGHKDRSKSHRKRETPKSYKTVDSPKRRSRSPHRKWSDSSKQDDSPSGASYGQ 244

Query: 59  YY------SHV--DYRDYDEGRSFSHDRRS-GPPHRGDESGYRWTRDDHSASRQ-----P 104
            Y      SH   +Y  Y +    +  R+S  PP++   +    TR     SR+     P
Sbjct: 245 DYDLSPSRSHTSSNYDSYKKSPGSTSRRQSVSPPYKEPSAYQSSTRSPSPYSRRQRSVSP 304

Query: 105 EYRDMRDGFRRKSFYS----SHYARERS--PYKRDNTFFRESPVGRKDSPHSRSGSSVSS 158
             R     + R   YS    S Y R RS  P+    +  R SP+  + S  SRS S   S
Sbjct: 305 YSRRRSSSYERSGSYSGRSPSPYGRRRSSSPFLSKRSLSR-SPLPSRKSMKSRSRSPAYS 363

Query: 159 RSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGN--PERDKERPVQSLKTSRDTSPSSG 216
           R  S    K  S  +S+H  S+ P       + G     + KER   +     D   S G
Sbjct: 364 RHSSSHSKKKRSSSRSRH-SSISPVRLPLNSSLGAELSRKKKERAAAAAAAKMDGKESKG 422

Query: 217 SAV-----SSSKVLDKPSRLTEKELAEAASKWAAEKLEKS-DESNLPEISEYEAGSTAPL 270
           S V      +S V  K S L  K+L  +       KLEKS  ++ L  ++          
Sbjct: 423 SPVFLPRKENSSVEAKDSGLESKKLPRSV------KLEKSAPDTELVNVTHLNTEVKNSS 476

Query: 271 FTDQPEEPESNTTHGIELFEDSQLTTRSKAIASK 304
            T + +  E++  H ++  + +Q T  SK IA K
Sbjct: 477 DTGKVKLDENSEKHLVKDLK-AQGTRDSKPIALK 509



 Score = 30.4 bits (67), Expect = 2.7
 Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 8/167 (4%)

Query: 64  DYRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHY 123
           D   + +  +F  DRR     RG +   R  +  H   R+   RD+    + +   S   
Sbjct: 79  DSDTFSDDMAFKLDRRENDERRGSDRSDRLHKHRHHQHRRS--RDLLKAKQTEKEKSQEV 136

Query: 124 ARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPG 183
           + +    K      R S   ++ +  +           S + S+S   H+ + RK     
Sbjct: 137 SSKSGSMKD-----RISGSSKRSNEETDDYGKAQVAKSSSKESRSSKLHKEKTRKERELK 191

Query: 184 ASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVS-SSKVLDKPS 229
           + +K +++ + +R+  +  +++ + +  S S     S SSK  D PS
Sbjct: 192 SGHKDRSKSHRKRETPKSYKTVDSPKRRSRSPHRKWSDSSKQDDSPS 238


>gi|50083281 KIAA1853 protein [Homo sapiens]
          Length = 611

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 56/180 (31%), Positives = 77/180 (42%), Gaps = 32/180 (17%)

Query: 72  RSFSHDRRSG---PPHRGDES--GYRWTRDDHSASRQPEY-------RDMRDGFRRKSFY 119
           RS S+  +SG   PP R   S     ++R   S  R P+Y       R+     RR+  Y
Sbjct: 431 RSPSYSSKSGKRSPPSRSSRSRRSPSYSRYSPSRERDPKYSEKDSQQRERERARRRRRSY 490

Query: 120 SSHYARER------------SPYKRDNTFFRESP-----VGRKDSPHSRSGSSVSSRSYS 162
           S    R R            S  KR   ++R SP     +    S +S S S  +SRSYS
Sbjct: 491 SPMRKRRRDSPSHLEARRITSARKRPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYS 550

Query: 163 PERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSS 222
             RS+S S  +S+ R S    +S +  + G+  R + R  +S   SR  S S  SA S S
Sbjct: 551 RSRSRSRSRRRSRTRTS--SSSSSRSPSPGSRSRSRSRS-RSRSRSRSQSRSYSSADSYS 607



 Score = 38.9 bits (89), Expect = 0.008
 Identities = 46/149 (30%), Positives = 61/149 (40%), Gaps = 23/149 (15%)

Query: 89  SGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSP 148
           S Y  TR    +SR P  R      + +S  S   +  RSP     +  R  P     S 
Sbjct: 393 SSYASTRSSSHSSRSPNPRASPRYTQSRSTSSEKRSYSRSPSYSSKSGKRSPP-----SR 447

Query: 149 HSRSGSSVSSRSYSP--ERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQS-L 205
            SRS  S S   YSP  ER   YS   SQ R+  R   + +R+   +P R + R   S L
Sbjct: 448 SSRSRRSPSYSRYSPSRERDPKYSEKDSQQRERER---ARRRRRSYSPMRKRRRDSPSHL 504

Query: 206 KTSRDT------------SPSSGSAVSSS 222
           +  R T            SPSS  ++SS+
Sbjct: 505 EARRITSARKRPIPYYRPSPSSSGSLSST 533



 Score = 35.8 bits (81), Expect = 0.064
 Identities = 55/205 (26%), Positives = 72/205 (35%), Gaps = 41/205 (20%)

Query: 18  RIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGS-------------YNRY----- 59
           R P  RA PR   S   +       + P    + G+ S             Y+RY     
Sbjct: 406 RSPNPRASPRYTQSRSTSSEKRSYSRSPSYSSKSGKRSPPSRSSRSRRSPSYSRYSPSRE 465

Query: 60  ----YSHVDYRDYDEGRSFSHDRRSGP--PHRGDESGYRWTRDDHSASRQP--EYRDMRD 111
               YS  D +  +  R+    R   P    R D   +   R   SA ++P   YR    
Sbjct: 466 RDPKYSEKDSQQRERERARRRRRSYSPMRKRRRDSPSHLEARRITSARKRPIPYYRPSPS 525

Query: 112 GF----RRKSFYSSH--------YARERS---PYKRDNTFFRESPVGRKDSPHSRSGSSV 156
                    S+YSS         Y+R RS     +R  T    S   R  SP SRS S  
Sbjct: 526 SSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRS 585

Query: 157 SSRSYSPERSKSYSFHQSQHRKSVR 181
            SRS S  RS+S S+  +    S R
Sbjct: 586 RSRSRSRSRSQSRSYSSADSYSSTR 610



 Score = 33.9 bits (76), Expect = 0.24
 Identities = 50/211 (23%), Positives = 74/211 (35%), Gaps = 41/211 (19%)

Query: 71  GRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPY 130
           G S SHD+   PP               S  ++ + +  R   RR S YS       SP 
Sbjct: 91  GHSASHDKDLTPP-------------PSSRGKKKKKKSTRKKRRRSSSYSP------SPV 131

Query: 131 KRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVR--PGASYKR 188
           K+           +    H R  S    R +S    KS    + +H+K  R  P  S++ 
Sbjct: 132 KKKKK--------KSSKKHKRRRSFSKKRRHSSSSPKSKRRDEKRHKKQSRSRPRKSHRH 183

Query: 189 QNEGNPER---DKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAA 245
           ++   P R    + RP       R  SP  G      K   + SR   K L + + +  +
Sbjct: 184 RHHRCPSRSQSSESRPSSCESRHRGRSPEEG-----QKSRRRHSRRCSKTLCKDSPEAQS 238

Query: 246 EKLEKSDESNLPEISE----YEAGSTAPLFT 272
            +        L  +S       +GS A LFT
Sbjct: 239 SRPPSQPLQMLGYLSARGVITGSGSAADLFT 269


>gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]
          Length = 282

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 51/161 (31%), Positives = 62/161 (38%), Gaps = 30/161 (18%)

Query: 72  RSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARER---S 128
           RS S+ RRS  P R   S  R      S SR   YR  R  + R  +  S Y+R R   S
Sbjct: 117 RSRSYGRRSRSPRRRHRSRSRGPSCSRSRSRS-RYRGSR--YSRSPYSRSPYSRSRYSRS 173

Query: 129 PYKRDNTFFRESPVG-----------------RKDSPHSRSGSSVSSRSYSPERSKSYSF 171
           PY R    +RES  G                      HS+SGSS SSRS S  +S S   
Sbjct: 174 PYSRSR--YRESRYGGSHYSSSGYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKSSS--- 228

Query: 172 HQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTS 212
             ++  KS     S  R    +  R   R  +    SR  S
Sbjct: 229 --ARRSKSSSVSRSRSRSRSSSMTRSPPRVSKRKSKSRSRS 267



 Score = 37.7 bits (86), Expect = 0.017
 Identities = 56/201 (27%), Positives = 73/201 (36%), Gaps = 18/201 (8%)

Query: 13  RYEYERIPRER-APPRSHP-SDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRDYDE 70
           RY    +PR R   PR      GY R       +     R       R+ S         
Sbjct: 91  RYGRRDLPRSRQGEPRGRSRGGGYGR-------RSRSYGRRSRSPRRRHRSRSRGPSCSR 143

Query: 71  GRSFSHDRRS----GPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYAR- 125
            RS S  R S     P  R   S  R++R  +S SR  E R     +    + +S Y+R 
Sbjct: 144 SRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYRESRYGGSHYSSSGYSNSRYSRY 203

Query: 126 --ERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPG 183
              RS  K  ++    S    K S   RS SS  SRS S  RS S +  +S  R S R  
Sbjct: 204 HSSRSHSKSGSSTSSRSASTSKSSSARRSKSSSVSRSRSRSRSSSMT--RSPPRVSKRKS 261

Query: 184 ASYKRQNEGNPERDKERPVQS 204
            S  R        ++E  + S
Sbjct: 262 KSRSRSKRPPKSPEEEGQMSS 282



 Score = 33.9 bits (76), Expect = 0.24
 Identities = 45/180 (25%), Positives = 66/180 (36%), Gaps = 19/180 (10%)

Query: 92  RWTRDDHSASRQ--PEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPH 149
           R+ R D   SRQ  P  R    G+ R+S   S+  R RSP +R                 
Sbjct: 91  RYGRRDLPRSRQGEPRGRSRGGGYGRRS--RSYGRRSRSPRRRHR--------------- 133

Query: 150 SRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSR 209
           SRS     SRS S  R +   + +S + +S    + Y R         + R   S  +S 
Sbjct: 134 SRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYRESRYGGSHYSSS 193

Query: 210 DTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAP 269
             S S  S   SS+   K    T    A  +   +A + + S  S     S   + + +P
Sbjct: 194 GYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKSSSARRSKSSSVSRSRSRSRSSSMTRSP 253


>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
          Length = 951

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 49/185 (26%), Positives = 74/185 (40%), Gaps = 9/185 (4%)

Query: 82  PPHRGDESGYRWTRDDHSASRQPEYRDM-RDGFRRKSFYSSHYARERSPYKRDNTFFRES 140
           PP R         R++    ++ +++   R   R   ++SS  +R RS  K  ++     
Sbjct: 737 PPDRPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSL---- 792

Query: 141 PVGRKDSPHSRSGS-SVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKE 199
           P   +    SRS S S   R++SPER +      + +R S  PGAS KR    +P   K+
Sbjct: 793 PSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKK 852

Query: 200 RPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEI 259
           +       SR  S +   +VS SK             A +AS    E    S E +    
Sbjct: 853 K---RRSRSRTKSKARSQSVSPSKQAAPRPAAPAAHSAHSASVSPVESRGSSQERSRGVS 909

Query: 260 SEYEA 264
            E EA
Sbjct: 910 QEKEA 914


>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
          Length = 754

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 31/217 (14%)

Query: 10  SEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHVDYRDYD 69
           ++G++ Y    RER+  R       +R  +         DR     Y+RY    +YR   
Sbjct: 552 TKGKHSYNSRTRERSRSRDRSRRVRSRTHD--------RDRSRSKEYHRYREQ-EYRR-- 600

Query: 70  EGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH------- 122
            GRS S +RR+ P     +   R  RD  S+ R+      +D +R +   SSH       
Sbjct: 601 RGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKENSES 660

Query: 123 ----YARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRK 178
               Y++ R     +N+  RE    R  SP S+   S      S +     S  +++  +
Sbjct: 661 EKRMYSKSRDHNSSNNS--REKKADRDQSPFSKIKQS------SQDNELKSSMLKNKEDE 712

Query: 179 SVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSS 215
            +R     + Q     E D     ++ K   ++SP +
Sbjct: 713 KIRSSVEKENQKSKGQENDHVHE-KNKKFDHESSPGT 748



 Score = 37.4 bits (85), Expect = 0.022
 Identities = 66/262 (25%), Positives = 93/262 (35%), Gaps = 45/262 (17%)

Query: 4   RRDEMWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYSHV 63
           + DE   + R E ER  RE  PP S P+    RL         L+ R G     R     
Sbjct: 293 KADEKERKNR-ERER-ERECNPPNSQPASYQRRL---------LVTRSGRKIKGRGPRR- 340

Query: 64  DYRDYDEGRSFSHDRRSG-PPHRGDE----------SGYRWTRDDHSA-------SRQP- 104
            YR     RS    RRS  PPH   E          SG RW + D S         R P 
Sbjct: 341 -YRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPV 399

Query: 105 --------EYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSV 156
                   ++R++ +   RK+       ++     ++    R S    K     +  +  
Sbjct: 400 RVKERKITDHRNVSESPNRKN-EKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKS 458

Query: 157 SSRSYSPERSKSY---SFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSP 213
            SRS S E+SKS    S H     K +R   S  R +E   E++K+   +     R  S 
Sbjct: 459 KSRSKSKEKSKSKERDSKHNRNEEKRMR-SRSKGRDHENVKEKEKQSDSKGKDQERSRSK 517

Query: 214 SSGSAVSSSKVLDKPSRLTEKE 235
                + S       S+  EK+
Sbjct: 518 EKSKQLESKSNEHDHSKSKEKD 539


>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
           sapiens]
          Length = 674

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 62/228 (27%), Positives = 85/228 (37%), Gaps = 23/228 (10%)

Query: 51  PGEGSYNRYYSHVDYRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMR 110
           PG  +  R  S          R+ S    S    R    G  +    H+ SR   +   R
Sbjct: 367 PGRNASARRRSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRSR 426

Query: 111 DGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKD-SPHSRSGSSVSSRSYSPERSKSY 169
              RR S   S   R      RD   +  SP  R    P  RS     SRS+S +R +  
Sbjct: 427 SRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRRS----RSRSHSGDRYRR- 481

Query: 170 SFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDK-- 227
                +H  S R  +S+      +P R +     SL  SR  SPS   + S S+   +  
Sbjct: 482 GGRGLRHHSSSRSRSSWSL----SPSRSR-----SLTRSRSHSPSPSQSRSRSRSRSQSP 532

Query: 228 -PSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQ 274
            PS   EK    AAS    EKL+K++ +     +  E G+  P  T Q
Sbjct: 533 SPSPAREKLTRPAASPAVGEKLKKTEPA-----AGKETGAAKPKLTPQ 575


>gi|229577273 BUD13 homolog isoform 2 [Homo sapiens]
          Length = 485

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 64/266 (24%), Positives = 92/266 (34%), Gaps = 17/266 (6%)

Query: 2   AYRRDEMWSEGRYEYERIPRERAPPRSHPSDGYNRLVNIVPKKPPLLDRPGEGSYNRYYS 61
           A+R    W       E +P  R      P     R+ +  P   P  DR      +   +
Sbjct: 96  AFRSSAKWKLLGGHNEDLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRA 155

Query: 62  HVDYRDYDEGRSFSHDRRSGPPHR-----GDESGYRWTRDDH---SASRQPEYRDMRDGF 113
             D  D    R   HD  + PP R      D S  R  R D    S  R+P++    D  
Sbjct: 156 RHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQ 215

Query: 114 RRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQ 173
           +      S    ++SP  +D+      P  R   P  RS  S  S     +R+KS     
Sbjct: 216 KATDSDLSSPRHKQSPGHQDSDSDLSPPRNR---PRHRSSDSDLSPPRRRQRTKSSDSDL 272

Query: 174 SQHRKSVRPGAS----YKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVL--DK 227
           S  R+S  PG      Y     G    D +R  Q LK     + +  +    ++ +  DK
Sbjct: 273 SPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDK 332

Query: 228 PSRLTEKELAEAASKWAAEKLEKSDE 253
             R    +L     +  AEK  + DE
Sbjct: 333 SGRKRNLKLERLEQRRKAEKDSERDE 358


>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
          Length = 1512

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 26/167 (15%)

Query: 80  SGPPHRGDESGYRWTRDDHSAS-----RQPEYRDMRDGFRRKSFYS------SHYARERS 128
           SG   RG+ S  R  RD  S+S     R  E+R  RDG R  S  S      SH   ER+
Sbjct: 185 SGTQRRGEGSERRPRRDRRSSSGRSKERHREHR-RRDGQRGGSEASKSRSRHSHSGEERA 243

Query: 129 PYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYK- 187
              +  +    S  GR+ S      +S +S S S  + +    H+S+ + S  P ++YK 
Sbjct: 244 EVAKSGS--SSSSGGRRKS------ASATSSSSSSRKDRDSKAHRSRTKSSKEPPSAYKE 295

Query: 188 -----RQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPS 229
                R+++  P+  + R   S    RD SP S  A  S +    PS
Sbjct: 296 PPKAYREDKTEPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPS 342



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 55/266 (20%), Positives = 92/266 (34%), Gaps = 48/266 (18%)

Query: 68  YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDG--FRRKSFYSSHYAR 125
           Y   RS S+ R S     GD S   ++      SR P    +R     R +S YSS ++R
Sbjct: 362 YSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSR 421

Query: 126 ERSPYKRDNTFFRESPVGR-----KDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSV 180
            RS ++   +  R S +       K S  +    +  +R+    R+   +      + + 
Sbjct: 422 SRSRHRLSRSRSRHSSISPSTLTLKSSLAAELNKNKKARAAEAARAAEAAKAAEATKAAE 481

Query: 181 RPGASYKRQNEGNPERDKE------------RPVQSLKTSRDTSPSSGSAVSSSKVLDKP 228
               + K  N   P +               + V+ +K     SPSSG  + + K   KP
Sbjct: 482 AAAKAAKASNTSTPTKGNTETSASASQTNHVKDVKKIKIEHAPSPSSGGTLKNDKAKTKP 541

Query: 229 -------------------SRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAP 269
                              + +  KE   AA+K  +  L++  +   P I   E      
Sbjct: 542 PLQVTKVENNLIVDKATKKAVIVGKESKSAATKEESVSLKEKTKPLTPSIGAKEKEQHVA 601

Query: 270 LFTDQ----------PEEPESNTTHG 285
           L T            PE+ E+++  G
Sbjct: 602 LVTSTLPPLPLPPMLPEDKEADSLRG 627



 Score = 36.6 bits (83), Expect = 0.038
 Identities = 69/260 (26%), Positives = 101/260 (38%), Gaps = 33/260 (12%)

Query: 73  SFSHDRRSGPPHRGDESGYRWTRDDHSASRQPE--YRDMRD---GFRRKSFYSSHYARER 127
           S S   R    HR   S  + +++  SA ++P   YR+ +     +RR+   S    R+ 
Sbjct: 268 SSSRKDRDSKAHR---SRTKSSKEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLGGRDD 324

Query: 128 SPYK-RDNTFFRE----SPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR---KS 179
           SP   R +   R     SP G   SP+SR     S   YS  RS SYS H S  R    S
Sbjct: 325 SPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPR-SPSPYSRRRSPSYSRHSSYERGGDVS 383

Query: 180 VRPGASYKRQNEGNP--------ERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRL 231
             P +S   +   +P         + + R   S + SR  S    S   S      PS L
Sbjct: 384 PSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTL 443

Query: 232 TEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFED 291
           T K      S  AAE L K+ ++   E +     + A   T +  E  +           
Sbjct: 444 TLK------SSLAAE-LNKNKKARAAEAARAAEAAKAAEAT-KAAEAAAKAAKASNTSTP 495

Query: 292 SQLTTRSKAIASKTKEIEQV 311
           ++  T + A AS+T  ++ V
Sbjct: 496 TKGNTETSASASQTNHVKDV 515


>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
          Length = 1452

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 26/167 (15%)

Query: 80  SGPPHRGDESGYRWTRDDHSAS-----RQPEYRDMRDGFRRKSFYS------SHYARERS 128
           SG   RG+ S  R  RD  S+S     R  E+R  RDG R  S  S      SH   ER+
Sbjct: 185 SGTQRRGEGSERRPRRDRRSSSGRSKERHREHR-RRDGQRGGSEASKSRSRHSHSGEERA 243

Query: 129 PYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYK- 187
              +  +    S  GR+ S      +S +S S S  + +    H+S+ + S  P ++YK 
Sbjct: 244 EVAKSGS--SSSSGGRRKS------ASATSSSSSSRKDRDSKAHRSRTKSSKEPPSAYKE 295

Query: 188 -----RQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPS 229
                R+++  P+  + R   S    RD SP S  A  S +    PS
Sbjct: 296 PPKAYREDKTEPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPS 342



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 55/266 (20%), Positives = 92/266 (34%), Gaps = 48/266 (18%)

Query: 68  YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDG--FRRKSFYSSHYAR 125
           Y   RS S+ R S     GD S   ++      SR P    +R     R +S YSS ++R
Sbjct: 362 YSRRRSPSYSRHSSYERGGDVSPSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSR 421

Query: 126 ERSPYKRDNTFFRESPVGR-----KDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSV 180
            RS ++   +  R S +       K S  +    +  +R+    R+   +      + + 
Sbjct: 422 SRSRHRLSRSRSRHSSISPSTLTLKSSLAAELNKNKKARAAEAARAAEAAKAAEATKAAE 481

Query: 181 RPGASYKRQNEGNPERDKE------------RPVQSLKTSRDTSPSSGSAVSSSKVLDKP 228
               + K  N   P +               + V+ +K     SPSSG  + + K   KP
Sbjct: 482 AAAKAAKASNTSTPTKGNTETSASASQTNHVKDVKKIKIEHAPSPSSGGTLKNDKAKTKP 541

Query: 229 -------------------SRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAP 269
                              + +  KE   AA+K  +  L++  +   P I   E      
Sbjct: 542 PLQVTKVENNLIVDKATKKAVIVGKESKSAATKEESVSLKEKTKPLTPSIGAKEKEQHVA 601

Query: 270 LFTDQ----------PEEPESNTTHG 285
           L T            PE+ E+++  G
Sbjct: 602 LVTSTLPPLPLPPMLPEDKEADSLRG 627



 Score = 36.6 bits (83), Expect = 0.038
 Identities = 69/260 (26%), Positives = 101/260 (38%), Gaps = 33/260 (12%)

Query: 73  SFSHDRRSGPPHRGDESGYRWTRDDHSASRQPE--YRDMRD---GFRRKSFYSSHYARER 127
           S S   R    HR   S  + +++  SA ++P   YR+ +     +RR+   S    R+ 
Sbjct: 268 SSSRKDRDSKAHR---SRTKSSKEPPSAYKEPPKAYREDKTEPKAYRRRRSLSPLGGRDD 324

Query: 128 SPYK-RDNTFFRE----SPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHR---KS 179
           SP   R +   R     SP G   SP+SR     S   YS  RS SYS H S  R    S
Sbjct: 325 SPVSHRASQSLRSRKSPSPAGGGSSPYSRRLPR-SPSPYSRRRSPSYSRHSSYERGGDVS 383

Query: 180 VRPGASYKRQNEGNP--------ERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRL 231
             P +S   +   +P         + + R   S + SR  S    S   S      PS L
Sbjct: 384 PSPYSSSSWRRSRSPYSPVLRRSGKSRSRSPYSSRHSRSRSRHRLSRSRSRHSSISPSTL 443

Query: 232 TEKELAEAASKWAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFED 291
           T K      S  AAE L K+ ++   E +     + A   T +  E  +           
Sbjct: 444 TLK------SSLAAE-LNKNKKARAAEAARAAEAAKAAEAT-KAAEAAAKAAKASNTSTP 495

Query: 292 SQLTTRSKAIASKTKEIEQV 311
           ++  T + A AS+T  ++ V
Sbjct: 496 TKGNTETSASASQTNHVKDV 515


>gi|17999539 DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Homo
           sapiens]
          Length = 1227

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 11/159 (6%)

Query: 65  YRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYA 124
           Y+D++E +    D++      GD++G    +D H  S + E      G   + +  S   
Sbjct: 79  YKDWEESKD---DQKDAEEEGGDQAGQNIRKDRHYRSARVETPSHPGGVSEEFWERS--- 132

Query: 125 RERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGA 184
           R+R   +R++  +  S    KD    +S      R Y  +R +          +S R G 
Sbjct: 133 RQRERERREHGVYASSKE-EKDWKKEKS----RDRDYDRKRDRDERDRSRHSSRSERDGG 187

Query: 185 SYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSK 223
           S +      PE  + RP  +   SR T     S   SS+
Sbjct: 188 SERSSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGSSR 226



 Score = 28.9 bits (63), Expect = 7.8
 Identities = 41/151 (27%), Positives = 57/151 (37%), Gaps = 18/151 (11%)

Query: 68  YDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRR-KSFYSSHYARE 126
           ++  R    +RR    +   +    W ++    SR  +Y   RD   R +S +SS   R+
Sbjct: 129 WERSRQRERERREHGVYASSKEEKDWKKEK---SRDRDYDRKRDRDERDRSRHSSRSERD 185

Query: 127 RSPYKRDNTFFRESPVGR-KDSPH-SRS---------GSSVSSRSYSPERSKSYSFHQSQ 175
               +       ESP  R KD+   SRS         GSS  S+  SP  + SY   +  
Sbjct: 186 GGSERSSRRNEPESPRHRPKDAATPSRSTWEEEDSGYGSSRRSQWESPSPTPSYRDSERS 245

Query: 176 HRKSVRPGASYKRQNEGNPERDKERPVQSLK 206
           HR S R      R   G    D   P  S K
Sbjct: 246 HRLSTR---DRDRSVRGKYSDDTPLPTPSYK 273


>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
          Length = 484

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 56/227 (24%), Positives = 82/227 (36%), Gaps = 19/227 (8%)

Query: 66  RDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASR------QPEYRDMRDGFRRKSFY 119
           R +   RS S  RR+    R   S  R  R  HS SR       P  R      R +   
Sbjct: 246 RRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSR 305

Query: 120 SSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKS 179
           S+   R++    ++    +  P     +  SRS S    R  S   ++S    +S  RK 
Sbjct: 306 STSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKL 365

Query: 180 VRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEA 239
            R  +  + + E   ++DKER       SRD    S S    SK  +K     ++E    
Sbjct: 366 SRSPSPRRHKKEKKKDKDKER-------SRDERERSTSKKKKSKDKEK-----DRERKSE 413

Query: 240 ASKWAAEKLEKSDESNLPEISEYE-AGSTAPLFTDQPEEPESNTTHG 285
           + K   +     DE      SE E      P+ T  P+  E +   G
Sbjct: 414 SDKDVKQVTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTKECSVEKG 460



 Score = 37.7 bits (86), Expect = 0.017
 Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 4/158 (2%)

Query: 51  PGEGSYNRYYSHVDYRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMR 110
           P    + R  S    R + + RS    R   P  R   S  R  R   ++  + + ++ +
Sbjct: 261 PSSSRHRRSRSRSRRRSHSKSRS--RRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDK 318

Query: 111 DGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYS 170
           +  R K+   S+    RS         R S  G +     RS     SRS SP R K   
Sbjct: 319 EKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEK 378

Query: 171 FHQSQHRKS--VRPGASYKRQNEGNPERDKERPVQSLK 206
                  +S   R  ++ K++   + E+D+ER  +S K
Sbjct: 379 KKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDK 416



 Score = 30.4 bits (67), Expect = 2.7
 Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 26/179 (14%)

Query: 99  SASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSS 158
           SA+ +P+ ++ +   RR S   S   R R+P              R     SRS     S
Sbjct: 234 SAAIEPDKKEEK---RRHSRSRSRSRRRRTPSS-----------SRHRRSRSRSRRRSHS 279

Query: 159 RSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKER-----PVQSLKTSRDTSP 213
           +S S  RSKS    +S  R+  R   S  +  +   E DKE+     P +S  T+R +  
Sbjct: 280 KSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKE-DKEKKRSKTPPKSYSTARRSRS 338

Query: 214 SSGS-----AVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYEAGST 267
           +S       + S ++   KP R  +++L+ + S    +K +K D+       E E  ++
Sbjct: 339 ASRERRRRRSRSGTRSPKKP-RSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTS 396


>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
          Length = 1007

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 52/226 (23%), Positives = 90/226 (39%), Gaps = 18/226 (7%)

Query: 3   YRRDEMWSEGRYEY--ERIPRERAPPRSH---PSDGYNRLVNIVPKKPPLLDRPGEGSYN 57
           +R D+  S+G  E   E+  R ++  R     PS            K P L R  +    
Sbjct: 194 HRSDKKKSKGGIEIVKEKTTRSKSKERKKSKSPSKRSKSQDQARKSKSPTLRRRSQEKIG 253

Query: 58  RYYSHVDYRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKS 117
           +  S  D +   E +S S DR+  P      S  R  +       + + +D R   + + 
Sbjct: 254 KARSPTDDKVKIEDKSKSKDRKKSPIINESRSRDRGKKSRSPVDLRGKSKDRRSRSKERK 313

Query: 118 FYSSHYARERSPYKRDNTFFRESPVGRKD-SPHSRSGSSVSSRSYSPE------RSKSYS 170
              S   +E+ P K  +   +++  G+++ SP  R G S   RS SP+      RS+S  
Sbjct: 314 SKRSETDKEKKPIKSPS---KDASSGKENRSPSRRPGRSPKRRSLSPKPRDKSRRSRSPL 370

Query: 171 FHQSQHRKSVRPGASY---KRQNEGNPERDKERPVQSLKTSRDTSP 213
            +  + ++S  P  +    +R    + ER +  P +   +S  T P
Sbjct: 371 LNDRRSKQSKSPSRTLSPGRRAKSRSLERKRREPERRRLSSPRTRP 416



 Score = 35.8 bits (81), Expect = 0.064
 Identities = 67/273 (24%), Positives = 104/273 (38%), Gaps = 36/273 (13%)

Query: 75  SHDRRSGPPHRGDESGYRWT---RDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYK 131
           S  RRS  P   D+S    +    D  S   +   R +  G R KS   S   + R P +
Sbjct: 349 SPKRRSLSPKPRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKS--RSLERKRREPER 406

Query: 132 RDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNE 191
           R  +  R  P     S   RS  +     +SP R +S S  + + R  +R   S +R++ 
Sbjct: 407 RRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPIRRRSRSPLRRSRSPRRRSR 466

Query: 192 GNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKS 251
               RD+ R  +S    R  S       S SKV        E +   + S+    + E S
Sbjct: 467 SPRRRDRGRRSRSRLRRRSRSRGGRRRRSRSKV-------KEDKFKGSLSEGMKVEQESS 519

Query: 252 DESNLPEISEYEAGSTAPLFTDQPEEPESNTTHGIELFEDS-----------QLTTRSKA 300
            + NL +    E    A L   +  + ++       L EDS           Q +TR+++
Sbjct: 520 SDDNLEDFDVEEEDEEA-LIEQRRIQRQAIVQKYKYLAEDSNMSVPSEPSSPQSSTRTRS 578

Query: 301 ---------IASKTKEIEQVYRQDCETFGMVVK 324
                    +A+  KE E   R++ +TF   VK
Sbjct: 579 PSPDDILERVAADVKEYE---RENVDTFEASVK 608



 Score = 29.3 bits (64), Expect = 6.0
 Identities = 36/136 (26%), Positives = 53/136 (38%), Gaps = 12/136 (8%)

Query: 131 KRDNTFFRESPVGRKDSPHSRSGSSV----SSRSYSPERSKS-----YSFHQSQHRKSVR 181
           KR  +  +E    R D   S+ G  +    ++RS S ER KS      S  Q Q RKS  
Sbjct: 182 KRSKSRSKERTRHRSDKKKSKGGIEIVKEKTTRSKSKERKKSKSPSKRSKSQDQARKSKS 241

Query: 182 PGASYKRQNEGNPER---DKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAE 238
           P    + Q +    R   D +  ++    S+D   S     S S+   K SR       +
Sbjct: 242 PTLRRRSQEKIGKARSPTDDKVKIEDKSKSKDRKKSPIINESRSRDRGKKSRSPVDLRGK 301

Query: 239 AASKWAAEKLEKSDES 254
           +  + +  K  KS  S
Sbjct: 302 SKDRRSRSKERKSKRS 317


>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
           sapiens]
          Length = 434

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 53/196 (27%), Positives = 75/196 (38%), Gaps = 12/196 (6%)

Query: 70  EGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH---YARE 126
           EGR      +S   H+ +E   +    D    R     +  D  +RK   SS    ++R 
Sbjct: 69  EGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRS 128

Query: 127 RSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASY 186
           RS  +R  +  RE    RK S  SRS     SRS S ER KS S  + + R+      S 
Sbjct: 129 RSRERRHRSRSRE----RKKS-RSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSR 183

Query: 187 KRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKP--SRLTEKELAEAASK-- 242
            R       R + R     +  R   P   S   S      P   R T  +  EA ++  
Sbjct: 184 SRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRL 243

Query: 243 WAAEKLEKSDESNLPE 258
             A+KL++  E  + E
Sbjct: 244 ERAKKLQEQREKEMVE 259


>gi|221139764 PHD and ring finger domains 1 [Homo sapiens]
          Length = 1648

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 2/116 (1%)

Query: 148  PHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKT 207
            P SRS S+ SSRS    + K  S    + R   R  +  +     +P   +ERP +  + 
Sbjct: 988  PPSRSRSTSSSRSRKKAKRKRVSREHGRTRSGTRSESRDRSSRSASPSVGEERPRR--QR 1045

Query: 208  SRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAASKWAAEKLEKSDESNLPEISEYE 263
            S+  S  S S  SSS+   K  +  +K        W   +      S  P  S YE
Sbjct: 1046 SKAKSRRSSSDRSSSRERAKRKKAKDKSREHRRGPWGHSRRTSRSRSGSPGSSSYE 1101



 Score = 33.1 bits (74), Expect = 0.42
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 15/120 (12%)

Query: 108  DMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSP---- 163
            ++R   R +S  SS  +R+++  KR +     +  G +     RS     SRS SP    
Sbjct: 985  ELRPPSRSRSTSSSR-SRKKAKRKRVSREHGRTRSGTRSESRDRS-----SRSASPSVGE 1038

Query: 164  -----ERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSA 218
                 +RSK+ S   S  R S R  A  K+  + + E  +     S +TSR  S S GS+
Sbjct: 1039 ERPRRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSREHRRGPWGHSRRTSRSRSGSPGSS 1098


>gi|62526045 zinc finger protein 638 [Homo sapiens]
          Length = 1978

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 58/215 (26%), Positives = 78/215 (36%), Gaps = 40/215 (18%)

Query: 78  RRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFF 137
           RRS   HR     +R +R       +P  R  R   R  S Y S  +R RSPY+  N F 
Sbjct: 497 RRSSSSHR-----FRRSRSPMHYMYRPRSRSPRICHRFISRYRSR-SRSRSPYRIRNPF- 549

Query: 138 RESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRP-------GASYKRQN 190
                          GS    RS SPER    S   S  +K++         G  + +Q 
Sbjct: 550 --------------RGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQK 595

Query: 191 EGNPERDKERPVQSLKTSRDTSPS--------SGSAVSSSKVLDKPSRLTEKELAEAASK 242
                     P Q  KTS  T PS        S S +    +  K   L +  L+E   K
Sbjct: 596 HLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSEC--K 653

Query: 243 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEE 277
             ++K   S +  L +      GS   L T+ PE+
Sbjct: 654 QVSDK-AVSLQRKLRKEQSLHYGSVL-LITELPED 686


>gi|21626468 zinc finger protein 638 [Homo sapiens]
          Length = 1978

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 58/215 (26%), Positives = 78/215 (36%), Gaps = 40/215 (18%)

Query: 78  RRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFF 137
           RRS   HR     +R +R       +P  R  R   R  S Y S  +R RSPY+  N F 
Sbjct: 497 RRSSSSHR-----FRRSRSPMHYMYRPRSRSPRICHRFISRYRSR-SRSRSPYRIRNPF- 549

Query: 138 RESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRP-------GASYKRQN 190
                          GS    RS SPER    S   S  +K++         G  + +Q 
Sbjct: 550 --------------RGSPKCFRSVSPERMSRRSVRSSDRKKALEDVVQRSGHGTEFNKQK 595

Query: 191 EGNPERDKERPVQSLKTSRDTSPS--------SGSAVSSSKVLDKPSRLTEKELAEAASK 242
                     P Q  KTS  T PS        S S +    +  K   L +  L+E   K
Sbjct: 596 HLEAADKGHSPAQKPKTSSGTKPSVKPTSATKSDSNLGGHSIRCKSKNLEDDTLSEC--K 653

Query: 243 WAAEKLEKSDESNLPEISEYEAGSTAPLFTDQPEE 277
             ++K   S +  L +      GS   L T+ PE+
Sbjct: 654 QVSDK-AVSLQRKLRKEQSLHYGSVL-LITELPED 686


>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
           sapiens]
          Length = 375

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 52/196 (26%), Positives = 75/196 (38%), Gaps = 12/196 (6%)

Query: 70  EGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYSSH---YARE 126
           +GR      +S   H+ +E   +    D    R     +  D  +RK   SS    ++R 
Sbjct: 10  QGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRS 69

Query: 127 RSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSVRPGASY 186
           RS  +R  +  RE    RK S  SRS     SRS S ER KS S  + + R+      S 
Sbjct: 70  RSRERRHRSRSRE----RKKS-RSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSR 124

Query: 187 KRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKP--SRLTEKELAEAASK-- 242
            R       R + R     +  R   P   S   S      P   R T  +  EA ++  
Sbjct: 125 SRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRL 184

Query: 243 WAAEKLEKSDESNLPE 258
             A+KL++  E  + E
Sbjct: 185 ERAKKLQEQREKEMVE 200


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 51/204 (25%), Positives = 77/204 (37%), Gaps = 24/204 (11%)

Query: 58  RYYSHVDYRDYDEG-------RSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMR 110
           R Y H  Y  ++ G       R +  D    P  R  + G  +     S +R   + D R
Sbjct: 142 RAYEHSAYGHHERGTGGFDRTRHYDQDYYRDPRERTLQHGLYYASRSRSPNRFDAH-DPR 200

Query: 111 DGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGS--SVSSRSYSPERSKS 168
              R +  ++      R  Y+ D T         ++  HSRS S  S  SR+ SP+R  S
Sbjct: 201 YEPRAREQFTLPSVVHRDIYRDDITREVRGRRPERNYQHSRSRSPHSSQSRNQSPQRLAS 260

Query: 169 YSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKP 228
                    ++ RP     R   G+  R +     S+ +S  TS  S  + SSS   D P
Sbjct: 261 ---------QASRP----TRSPSGSGSRSRSSSSDSISSSSSTSSDSSDSSSSSSD-DSP 306

Query: 229 SRLTEKELAEAASKWAAEKLEKSD 252
           +R  +     A +      LEK +
Sbjct: 307 ARSVQSAAVPAPTSQLLSSLEKDE 330


>gi|16905517 FUS interacting protein (serine-arginine rich) 1
           isoform 2 [Homo sapiens]
          Length = 262

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 51/190 (26%), Positives = 70/190 (36%), Gaps = 22/190 (11%)

Query: 43  KKPPLLDRPGEGSYNRYYSHVDYRDYDE---GRSFSHDRRSGPPHRGDESGYRWTRDDHS 99
           +K P   +  EG     YS   Y DYD     RS S++RR     R     Y + R    
Sbjct: 90  RKTPNQMKAKEG--RNVYSSSRYDDYDRYRRSRSRSYERRRS---RSRSFDYNYRRSYSP 144

Query: 100 ASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGSSVSSR 159
            + +P  R  R          SH   +R  +K  N  F  S    K +  SRS S     
Sbjct: 145 RNSRPTGRPRRS--------RSHSDNDR--FKHRNRSFSRS----KSNSRSRSKSQPKKE 190

Query: 160 SYSPERSKSYSFHQSQHRKSVRPGASYKRQNEGNPERDKERPVQSLKTSRDTSPSSGSAV 219
             +  RS+S S  +++          YK  +    E  K+ P +S   SR  S S   + 
Sbjct: 191 MKAKSRSRSASHTKTRGTSKTDSKTHYKSGSRYEKESRKKEPPRSKSQSRSQSRSRSKSR 250

Query: 220 SSSKVLDKPS 229
           S S    K S
Sbjct: 251 SRSWTSPKSS 260



 Score = 35.0 bits (79), Expect = 0.11
 Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 28/147 (19%)

Query: 95  RDDHSASRQPEYRDMRDGFRRKSFYSSHYARERSPYKRDNTFFRESPVGRKDSPHSRSGS 154
           R+ +S+SR  +Y    D +RR    S  Y R RS  +  +  +R S   R   P  R   
Sbjct: 102 RNVYSSSRYDDY----DRYRRSR--SRSYERRRSRSRSFDYNYRRSYSPRNSRPTGR--- 152

Query: 155 SVSSRSYSPERSKSYSFHQS-QHRKSVRPGASYKRQNEGNPERDKERPVQSLKT-SRDTS 212
                   P RS+S+S +   +HR       S+ R    +  R K +P + +K  SR  S
Sbjct: 153 --------PRRSRSHSDNDRFKHRNR-----SFSRSKSNSRSRSKSQPKKEMKAKSRSRS 199

Query: 213 PS----SGSAVSSSKVLDKPSRLTEKE 235
            S     G++ + SK   K     EKE
Sbjct: 200 ASHTKTRGTSKTDSKTHYKSGSRYEKE 226


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.128    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,362,986
Number of Sequences: 37866
Number of extensions: 812400
Number of successful extensions: 3669
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 260
Number of HSP's that attempted gapping in prelim test: 2913
Number of HSP's gapped (non-prelim): 738
length of query: 374
length of database: 18,247,518
effective HSP length: 104
effective length of query: 270
effective length of database: 14,309,454
effective search space: 3863552580
effective search space used: 3863552580
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.