SNX18 6071

Name: SNX18	Sequence: fasta or formatted (628aa)		NCBI GI: 157057543
Description: sorting nexin 18 isoform b		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [624aa] sorting nexin 18 isoform a alt prot [591aa] sorting nexin 18 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 55 3 C cysteine 1.4 9 1 D aspartate 6.2 39 3 E glutamate 5.7 36 2 F phenylalanine 5.6 35 2 G glycine 8.9 56 3 H histidine 2.1 13 2 I isoleucine 2.2 14 2 K lysine 5.3 33 2 L leucine 8.9 56 2 M methionine 1.3 8 1 N asparagine 2.1 13 1 P proline 8.1 51 3 Q glutamine 5.7 36 2 R arginine 4.3 27 2 S serine 8.4 53 3 T threonine 3.8 24 1 V valine 6.1 38 2 W tryptophan 1.9 12 2 Y tyrosine 3.2 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sorting nexin 18 isoform b SNX18 0.943 sorting nexin 18 isoform c SNX18 0.862 sorting nexin 18 isoform a SNX33 0.373 sorting nexin 33 SNX9 0.215 sorting nexin 9 SNX30 0.036 sorting nexin family member 30 SNX7 0.033 sorting nexin 7 isoform b SNX7 0.033 sorting nexin 7 isoform a ANKRD18B 0.031 PREDICTED: ankyrin repeat domain 18B ANKRD18B 0.031 PREDICTED: ankyrin repeat domain 18B LOC100133063 0.028 PREDICTED: similar to breast cancer anti-estrogen r... SNX8 0.028 sorting nexin 8 ANKRD18A 0.025 PREDICTED: ankyrin repeat domain 18A ANKRD18A 0.025 PREDICTED: ankyrin repeat domain 18A BCAR1 0.025 breast cancer anti-estrogen resistance 1 LOC646079 0.024 PREDICTED: similar to breast cancer anti-estrogen r... LOC646079 0.024 PREDICTED: similar to breast cancer anti-estrogen r... LOC646079 0.024 PREDICTED: similar to breast cancer anti-estrogen r... SNX4 0.024 sorting nexin 4 PACSIN3 0.022 protein kinase C and casein kinase substrate in neur... SH3GL3 0.020 SH3-domain GRB2-like 3 SH3GL2 0.020 SH3-domain GRB2-like 2 PACSIN1 0.020 protein kinase C and casein kinase substrate in neur... PACSIN2 0.020 protein kinase C and casein kinase substrate in neu... EFS 0.020 embryonal Fyn-associated substrate isoform 1 SH3GL1 0.020 SH3-domain GRB2-like 1 SNX1 0.020 sorting nexin 1 isoform c SNX1 0.020 sorting nexin 1 isoform a SNX11 0.020 sorting nexin 11 SNX11 0.020 sorting nexin 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.